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The map label for this gene is 94309548

Identifier: 94309548

GI number: 94309548

Start: 651978

End: 653267

Strand: Direct

Name: 94309548

Synonym: Rmet_0603

Alternate gene names: NA

Gene position: 651978-653267 (Clockwise)

Preceding gene: 94309547

Following gene: 94309549

Centisome position: 16.6

GC content: 67.91

Gene sequence:

>1290_bases
GTGAATCTCACCAACCGGGCCGTCACATTGCCGCTCTGGGCAATCCTGTATTTCGTCCTCGGATACTTTTCGCACAAATT
CAATGGGCCGTTCACGGCCGCCGGCTACATCTGGCTGCCGGCCGGCGTGACCGTGGCCGCTTTCATGCTGGCGCCGATGC
GCCGCTGGCTCGGGCTCGGCCTGGCGTTCCTGGTGGCGCAGATGCTGCTGGGCATGGTGGAAGGGCGCGATGCGTTCCGG
ATGCTGCTGTTCTCCCTCGATGAGATTGGCTTCGCGGCGCTGGCCGTGGCCGTGATCCACCTGACCAAGTTCTCGCTGGA
AGGGCTGGCGTTCCTGCGCGGACTGCTGCTGGCTGGCGTAATCGCCAGTGTCGGCGGGGCGGTCATCGGCGCGGGCTGGT
TCTGGCTATTCCTTGATGTGCCGTTCTGGGCTACCGCCAAGGTGTGGGCCGCGGCGGACTTCGTCGGGGTGCTGATCGTC
ACGCCGGTCTTCGCCGGATGGGCGCGTTTTCGCGCCGCACGTTCGGGCGGCCGCCAGCCCGGCGAGTTCTTCTTCGGCCT
GGCCGCGCTGGCATGTGTGCTGGCCACCGCTGCACTGGTGTTCGACGGCACGCGGATCGCGCAGCTCTCGCTCGGCGTGG
CCTATGCGCTGACCTATATCCCGTTGTTCTTCGTGGCCATCGTGGCGTTGCTGCTCGGTGGGCGTGGCGGATCGGTCGCC
GTGGCGTTGCTGACCGTGCTCGTGCTGGTCAATACGGCGCAGGGCGACGGCCCGTTTGCCGAAACCGCGCTGTACCACGG
CGACTCCCTGTTGATCGCGCAGCTTTACCTGGCCGTAGCCGCGCTGCTGACGCTGCTGATCAATACGCTGCGAACGGCGC
GCGAGCAGACGAACGCGCAGGCCGCCGCACGCCAGAATGACGTGGAACTGGCGCTGGCTGCCAGTGGGCAACTCGTCTAC
CGCCTTGATCCGCATAGCGGGCGGCTGCGCTGGAGCGGCAGCGTCGAACGCGCGCTGGGCCTGCACGACTCGGCGTTGTC
CACGCTCGACGATGTCCTGGCCCGCGTGCATCCGGACGACCGTGCCGAGGTGCGCCGCCGCTGGCTGCGTGAGTGCGATG
GCGAGACGCGCGGTGACCTGACGTTCCGGCTCTTGCTGCCGGCGGGCGCCACCACGACGATCGTCGACATGAGTGGCCCG
CTGCTCGACGGCGACGATTCCGTCGCGTTGATTGCCGGCGCATGGCGCGTGATCGCCTCCCACGACACGGAAGGGCGGCG
CGCGGCATGA

Upstream 100 bases:

>100_bases
TACAATCCGCCACACTTCTGGCGGCCCAGGTCAACGGCGGGCCTCGTCTTGCCGTTCAGATCATGGTGATAGTCAGTCAT
ACTGAATCGGGAACATCACA

Downstream 100 bases:

>100_bases
CAACGCAACAGGCTCCACGCATCGGAGCCCTGCTGATTCACGGCTTGGGCGGTACCCAGTACGACCTCGGGCCGATGCAC
AAGGTGCTGCGCCGCGCGGG

Product: putative integral membrane sensor protein

Products: NA

Alternate protein names: Integral Membrane Sensor Protein; PAS Fold Family Protein; PAS/PAC Sensor Protein

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MNLTNRAVTLPLWAILYFVLGYFSHKFNGPFTAAGYIWLPAGVTVAAFMLAPMRRWLGLGLAFLVAQMLLGMVEGRDAFR
MLLFSLDEIGFAALAVAVIHLTKFSLEGLAFLRGLLLAGVIASVGGAVIGAGWFWLFLDVPFWATAKVWAAADFVGVLIV
TPVFAGWARFRAARSGGRQPGEFFFGLAALACVLATAALVFDGTRIAQLSLGVAYALTYIPLFFVAIVALLLGGRGGSVA
VALLTVLVLVNTAQGDGPFAETALYHGDSLLIAQLYLAVAALLTLLINTLRTAREQTNAQAAARQNDVELALAASGQLVY
RLDPHSGRLRWSGSVERALGLHDSALSTLDDVLARVHPDDRAEVRRRWLRECDGETRGDLTFRLLLPAGATTTIVDMSGP
LLDGDDSVALIAGAWRVIASHDTEGRRAA

Sequences:

>Translated_429_residues
MNLTNRAVTLPLWAILYFVLGYFSHKFNGPFTAAGYIWLPAGVTVAAFMLAPMRRWLGLGLAFLVAQMLLGMVEGRDAFR
MLLFSLDEIGFAALAVAVIHLTKFSLEGLAFLRGLLLAGVIASVGGAVIGAGWFWLFLDVPFWATAKVWAAADFVGVLIV
TPVFAGWARFRAARSGGRQPGEFFFGLAALACVLATAALVFDGTRIAQLSLGVAYALTYIPLFFVAIVALLLGGRGGSVA
VALLTVLVLVNTAQGDGPFAETALYHGDSLLIAQLYLAVAALLTLLINTLRTAREQTNAQAAARQNDVELALAASGQLVY
RLDPHSGRLRWSGSVERALGLHDSALSTLDDVLARVHPDDRAEVRRRWLRECDGETRGDLTFRLLLPAGATTTIVDMSGP
LLDGDDSVALIAGAWRVIASHDTEGRRAA
>Mature_429_residues
MNLTNRAVTLPLWAILYFVLGYFSHKFNGPFTAAGYIWLPAGVTVAAFMLAPMRRWLGLGLAFLVAQMLLGMVEGRDAFR
MLLFSLDEIGFAALAVAVIHLTKFSLEGLAFLRGLLLAGVIASVGGAVIGAGWFWLFLDVPFWATAKVWAAADFVGVLIV
TPVFAGWARFRAARSGGRQPGEFFFGLAALACVLATAALVFDGTRIAQLSLGVAYALTYIPLFFVAIVALLLGGRGGSVA
VALLTVLVLVNTAQGDGPFAETALYHGDSLLIAQLYLAVAALLTLLINTLRTAREQTNAQAAARQNDVELALAASGQLVY
RLDPHSGRLRWSGSVERALGLHDSALSTLDDVLARVHPDDRAEVRRRWLRECDGETRGDLTFRLLLPAGATTTIVDMSGP
LLDGDDSVALIAGAWRVIASHDTEGRRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45881; Mature: 45881

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCC
>Mature Secondary Structure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CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA