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The map label for this gene is arcB [H]

Identifier: 94309531

GI number: 94309531

Start: 628544

End: 629644

Strand: Direct

Name: arcB [H]

Synonym: Rmet_0586

Alternate gene names: 94309531

Gene position: 628544-629644 (Clockwise)

Preceding gene: 94309530

Following gene: 94309537

Centisome position: 16.0

GC content: 64.21

Gene sequence:

>1101_bases
ATGAAGCACGCACTGAAAGAAACCGGGATGACGCGATTCCTGGATGCGGGTGACGTTGCGACGCTGGTGCGGCGCATCGG
TGTTCCGGTGGCCATCATGCAGATGGCGGACTGTGTGCGACAGGATTTCCTGCGCTGGGATGCGTTCGAGAAGTCGGCAC
GGCTGGCCAGCCATTCACCGGTGGGCGTGATAGAACTGATGCCTGTCAGCGATGGTGTCCAGTTCGCGTTCAAGTACGTC
AACGGACATCCGCGCAACGCGCGACACGCGCTGCCAACGGTGATGGCGTGCGGCATGCTGGCCGAAGTGGAGACCGGATT
TCCGTTGCTGCTGGCCGATCTCACGCTGGCCACGGCCTTGCGCACCGCGGCGACGTCGGTGCTGGCTGCGCGTGCCATGG
CGCGGCCCGGCGCGCGGACCATGGCGTTGATCGGCAATGGCGCCCAGGCCGAATTCCAGTCGCTGGCCTTCCATGCCGGT
CTCGGTATCGAAACAGTGCGCGCCTTTGACATCGACGCGCATGCCACCGCACGGCTGATGCGCAACTTCGCGGCAGTGCC
GGGGCTGAACATCGTGCCGACACGTTCGGTGCGAGAGGCGCTCGACAGTGCCGATATCGTCACCACGGTAACGGCGGACA
AGACCCGCGCTACGATTCTGACACCGGACATGATCCGGCCGGGGATGCATCTCAATGCCGTGGGTGGTGATTGCCCGGGC
AAAACCGAGCTGCACGTCGACATCCTGCATCGCGCGCGGATCATGGTGGAGTACGCGCCGCAGTCGCGTATCGAAGGCGA
AATCCAGCAGTGGCCGGAGGCGCCGGTCAGTGAGCTGTGGCAAGTGTTGTCGGGCGCGGTGCCGGGGCGTGTCAGTGCGG
ATGACGTGACGATCTTCGATTCCGTTGGTTTCGCGCTGGAAGACTACTCGGCGTTGCGTTGGCTCCATGCGGCGGCCATC
GCGCATCACGCGGGCCAGTTCATCGAGCTCGTGGCCTTGCCGCCAGATCCGCGTGATCTCTATGGATGGATGATGAAGCC
GGATATCGCCATGCCCGGTGCGATGAGCGATGTTCCCGGGAAGGCAGTCGCCCTGGCCTGA

Upstream 100 bases:

>100_bases
GTACATGATGTCGGGCGGTGGCGCGTATTGCATGACGTTGCGTCTGGACCGCGTCAGCACGTCCGTGCGGCGTGCGGCCG
CGGCATGAAAGGAGCCGAGC

Downstream 100 bases:

>100_bases
GGCATCGTCAACGCCAGGCGCATGCCGTGACAATTGGTGCGCCCAATGGCACAACGGCCCGGACTTGCGTCGGGGCCGTT
GTCGTATCGGGAATCAGGCG

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD [H]

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKHALKETGMTRFLDAGDVATLVRRIGVPVAIMQMADCVRQDFLRWDAFEKSARLASHSPVGVIELMPVSDGVQFAFKYV
NGHPRNARHALPTVMACGMLAEVETGFPLLLADLTLATALRTAATSVLAARAMARPGARTMALIGNGAQAEFQSLAFHAG
LGIETVRAFDIDAHATARLMRNFAAVPGLNIVPTRSVREALDSADIVTTVTADKTRATILTPDMIRPGMHLNAVGGDCPG
KTELHVDILHRARIMVEYAPQSRIEGEIQQWPEAPVSELWQVLSGAVPGRVSADDVTIFDSVGFALEDYSALRWLHAAAI
AHHAGQFIELVALPPDPRDLYGWMMKPDIAMPGAMSDVPGKAVALA

Sequences:

>Translated_366_residues
MKHALKETGMTRFLDAGDVATLVRRIGVPVAIMQMADCVRQDFLRWDAFEKSARLASHSPVGVIELMPVSDGVQFAFKYV
NGHPRNARHALPTVMACGMLAEVETGFPLLLADLTLATALRTAATSVLAARAMARPGARTMALIGNGAQAEFQSLAFHAG
LGIETVRAFDIDAHATARLMRNFAAVPGLNIVPTRSVREALDSADIVTTVTADKTRATILTPDMIRPGMHLNAVGGDCPG
KTELHVDILHRARIMVEYAPQSRIEGEIQQWPEAPVSELWQVLSGAVPGRVSADDVTIFDSVGFALEDYSALRWLHAAAI
AHHAGQFIELVALPPDPRDLYGWMMKPDIAMPGAMSDVPGKAVALA
>Mature_366_residues
MKHALKETGMTRFLDAGDVATLVRRIGVPVAIMQMADCVRQDFLRWDAFEKSARLASHSPVGVIELMPVSDGVQFAFKYV
NGHPRNARHALPTVMACGMLAEVETGFPLLLADLTLATALRTAATSVLAARAMARPGARTMALIGNGAQAEFQSLAFHAG
LGIETVRAFDIDAHATARLMRNFAAVPGLNIVPTRSVREALDSADIVTTVTADKTRATILTPDMIRPGMHLNAVGGDCPG
KTELHVDILHRARIMVEYAPQSRIEGEIQQWPEAPVSELWQVLSGAVPGRVSADDVTIFDSVGFALEDYSALRWLHAAAI
AHHAGQFIELVALPPDPRDLYGWMMKPDIAMPGAMSDVPGKAVALA

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI62241008, Length=233, Percent_Identity=27.8969957081545, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI4503065, Length=233, Percent_Identity=27.8969957081545, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 39368; Mature: 39368

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHALKETGMTRFLDAGDVATLVRRIGVPVAIMQMADCVRQDFLRWDAFEKSARLASHSP
CCCCHHHCCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VGVIELMPVSDGVQFAFKYVNGHPRNARHALPTVMACGMLAEVETGFPLLLADLTLATAL
CCEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RTAATSVLAARAMARPGARTMALIGNGAQAEFQSLAFHAGLGIETVRAFDIDAHATARLM
HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHH
RNFAAVPGLNIVPTRSVREALDSADIVTTVTADKTRATILTPDMIRPGMHLNAVGGDCPG
HHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCEEEECHHHHCCCCEEECCCCCCCC
KTELHVDILHRARIMVEYAPQSRIEGEIQQWPEAPVSELWQVLSGAVPGRVSADDVTIFD
CCEEEHHHHHHHHEEEEECCHHHCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEH
SVGFALEDYSALRWLHAAAIAHHAGQFIELVALPPDPRDLYGWMMKPDIAMPGAMSDVPG
HCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCC
KAVALA
CEEECC
>Mature Secondary Structure
MKHALKETGMTRFLDAGDVATLVRRIGVPVAIMQMADCVRQDFLRWDAFEKSARLASHSP
CCCCHHHCCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VGVIELMPVSDGVQFAFKYVNGHPRNARHALPTVMACGMLAEVETGFPLLLADLTLATAL
CCEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RTAATSVLAARAMARPGARTMALIGNGAQAEFQSLAFHAGLGIETVRAFDIDAHATARLM
HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHH
RNFAAVPGLNIVPTRSVREALDSADIVTTVTADKTRATILTPDMIRPGMHLNAVGGDCPG
HHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCEEEECHHHHCCCCEEECCCCCCCC
KTELHVDILHRARIMVEYAPQSRIEGEIQQWPEAPVSELWQVLSGAVPGRVSADDVTIFD
CCEEEHHHHHHHHEEEEECCHHHCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEH
SVGFALEDYSALRWLHAAAIAHHAGQFIELVALPPDPRDLYGWMMKPDIAMPGAMSDVPG
HCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCC
KAVALA
CEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9375792 [H]