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The map label for this gene is ynfJ [C]

Identifier: 94309529

GI number: 94309529

Start: 625583

End: 627496

Strand: Direct

Name: ynfJ [C]

Synonym: Rmet_0584

Alternate gene names: 94309529

Gene position: 625583-627496 (Clockwise)

Preceding gene: 94309522

Following gene: 94309530

Centisome position: 15.93

GC content: 67.61

Gene sequence:

>1914_bases
TTGCTGTGCGCGAGGCGCGCCGCAGCGTACCACGCTACAGGAGCGAGGCCCGCCAATATATCATGGCGTGATATATTCCG
CCGACCGGCAATCCTGCCGGAAAAGAAGCCGCCCCCGCTCATGCATACGGAAGTTCACACCGTTGAAAAACGCGACTACG
CCGTCAATGGCCGCCTGCCCATGCTGGCTGCCATCGCGCTAGGCATCGGTGCCATCAGCACCGGCGCCGCCTATGTGCTG
GTCAACCTGATCCACTTCTTCACCAACCTGTTCTTCTTCCAGACGCTGTCGTTTGCCGATCGCTCGCCGGCTGGACACAC
GCTGGGCCCCTGGGTGATCGTGGTGCCTGCGATCGGCGGGTTGATCGTCGGCCTGATGGCACGCTATGGCAGCGACAAGA
TCCGCGGCCACGGCATTCCAGAGGCGATCGAGGCGGTGCTGTTCGGCAAGAGCAAGATGTCGCCGAAGGTGGCGGTGCTC
AAGCCGCTGTCGTCGGGCATCGTGATCGGCAGCGGTGGCCCGTTCGGGGCGGAAGGGCCGATCATCATGACCGGCGGCTC
GATCGCCTCGCTGCTGGCGCAGTACCTGCATCTGACGGCGGCCGAGCGCAAGACGCTGCTCGTATCTGGCGCCTGCGCAG
GTATGACCGCGATCTTCGGCACGCCTGTGGCGGCCGTCCTGCTGGCCATCGAACTGCTGCTGTTCGAACTGCGCCCGCGC
AGCCTGCTGCCCGTGGCGCTGGCCTGCGCCGTGGCCGGGTTCCTGCGGCCGTTCGTGTTCGAAGCGGGTCCGCTGTTTCC
GCTGCAGACCGCGCCGGCCAGCACACTGGCGCTCGGTTCGTGCGTGCTGGCAGGGCTGCTGTGCGGCGCGCTTGGCGCGG
GGCTCACGCTCGCGCTGTATCGCACCGAGGATGCATTCGACCATCTGCGCCTGCACTGGATGTGGTGGCCGGCCATCGGT
GGCCTGGTGGTCGGGATCGGCGGCTATTTCGAGCCGCGCGCGCTCGGCGTGGGCTACGACGTAATCGGCGACCTGCTCAA
CAACCGGCTGCTCGTGGAAGCGGCGGTGGCGCTGCTGGCCGTGAAGGCGGTGATCTGGATCGCGGCGCTCGGCTCGGGCA
CTTCGGGCGGGGTACTGGCCCCGTTGCTGATGCTTGGCGCGGGGCTTGGCGTGGTGCTGGCCCCGATGCTGCCGGGCGGA
TCGCCGGGCCTGTGGGCGCTGGTCTGCATGGCCGGTGTGCTTGGCAGTGTACTCGGCGCGCCGCTGACGGCCATCGTGTT
CGCCTTCGGCCTGACGCACGATAGCGAGGCACTGTTGCCGCTGCTGCTGACGACGGCCGTGGCCTACGGTTTCTCGGTGC
TGACGATGAAGCGCTCGATCATGACCGAGAAGATCGCGCGCCGCGGGCTGCACATCTATCGCGAGTACGGCGTCGATCCG
CTGGAGCGCGCGCATGTGGGCGAACTGATGACGCGGGACGTGGTGTGGATCGACGCCAGCCTGCCGGTCACCGAGGCGCT
GCCGCGATACTTCGGCGACCATGCTGCGCATCGCGCCTATCCGGTGCTCCGGGACGGCAGGGTGATCGGTATGCTCCAGC
GCGCGGCAATTGTCGCGGCACATGCCGGCGACGATGCCGGACTGACCTGTGGCGATCTGCTTGCCGATGGCGCAAATCCG
AACGCCGGTCCGGCCGTGCTGTTGCCCGCACAGACCGGTCGCGCCGCTGCCGGACGCATGGCCGAACTCAGCGTGGCCAG
GCTGCCAGTGGTCGAGGACGAGATCACGATGCGGCTGGTGGGCATTGTCTCGCTGCGCGACCTGATGGCGCCCAGCAGCC
ACGTGCTGCACGAGGAAACCCAGCGTGAGCGGTTGCGCGGGATGGCGATAAAGGCGCTTGGCCGCACCGTGTAG

Upstream 100 bases:

>100_bases
AACCACGCACGTGTTCCGGCAACGGAAGTGGATAAGTCGAATGCTGCTGGCATCGAAAGCGGGGGCGGTTGGGGGCGTTG
GGGGCGCAACGGGGGCGTCT

Downstream 100 bases:

>100_bases
CAGGATCCGGCTGTCCTGCTGGCATTTTGTGCATGGATGCTTGACATATCGGATACGAAGGATAGCAATTTGGTCAGTTT
GTTAGCTGTTTTTTGACGTG

Product: putative CBS:Cl-channel, voltage gated

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 637; Mature: 637

Protein sequence:

>637_residues
MLCARRAAAYHATGARPANISWRDIFRRPAILPEKKPPPLMHTEVHTVEKRDYAVNGRLPMLAAIALGIGAISTGAAYVL
VNLIHFFTNLFFFQTLSFADRSPAGHTLGPWVIVVPAIGGLIVGLMARYGSDKIRGHGIPEAIEAVLFGKSKMSPKVAVL
KPLSSGIVIGSGGPFGAEGPIIMTGGSIASLLAQYLHLTAAERKTLLVSGACAGMTAIFGTPVAAVLLAIELLLFELRPR
SLLPVALACAVAGFLRPFVFEAGPLFPLQTAPASTLALGSCVLAGLLCGALGAGLTLALYRTEDAFDHLRLHWMWWPAIG
GLVVGIGGYFEPRALGVGYDVIGDLLNNRLLVEAAVALLAVKAVIWIAALGSGTSGGVLAPLLMLGAGLGVVLAPMLPGG
SPGLWALVCMAGVLGSVLGAPLTAIVFAFGLTHDSEALLPLLLTTAVAYGFSVLTMKRSIMTEKIARRGLHIYREYGVDP
LERAHVGELMTRDVVWIDASLPVTEALPRYFGDHAAHRAYPVLRDGRVIGMLQRAAIVAAHAGDDAGLTCGDLLADGANP
NAGPAVLLPAQTGRAAAGRMAELSVARLPVVEDEITMRLVGIVSLRDLMAPSSHVLHEETQRERLRGMAIKALGRTV

Sequences:

>Translated_637_residues
MLCARRAAAYHATGARPANISWRDIFRRPAILPEKKPPPLMHTEVHTVEKRDYAVNGRLPMLAAIALGIGAISTGAAYVL
VNLIHFFTNLFFFQTLSFADRSPAGHTLGPWVIVVPAIGGLIVGLMARYGSDKIRGHGIPEAIEAVLFGKSKMSPKVAVL
KPLSSGIVIGSGGPFGAEGPIIMTGGSIASLLAQYLHLTAAERKTLLVSGACAGMTAIFGTPVAAVLLAIELLLFELRPR
SLLPVALACAVAGFLRPFVFEAGPLFPLQTAPASTLALGSCVLAGLLCGALGAGLTLALYRTEDAFDHLRLHWMWWPAIG
GLVVGIGGYFEPRALGVGYDVIGDLLNNRLLVEAAVALLAVKAVIWIAALGSGTSGGVLAPLLMLGAGLGVVLAPMLPGG
SPGLWALVCMAGVLGSVLGAPLTAIVFAFGLTHDSEALLPLLLTTAVAYGFSVLTMKRSIMTEKIARRGLHIYREYGVDP
LERAHVGELMTRDVVWIDASLPVTEALPRYFGDHAAHRAYPVLRDGRVIGMLQRAAIVAAHAGDDAGLTCGDLLADGANP
NAGPAVLLPAQTGRAAAGRMAELSVARLPVVEDEITMRLVGIVSLRDLMAPSSHVLHEETQRERLRGMAIKALGRTV
>Mature_637_residues
MLCARRAAAYHATGARPANISWRDIFRRPAILPEKKPPPLMHTEVHTVEKRDYAVNGRLPMLAAIALGIGAISTGAAYVL
VNLIHFFTNLFFFQTLSFADRSPAGHTLGPWVIVVPAIGGLIVGLMARYGSDKIRGHGIPEAIEAVLFGKSKMSPKVAVL
KPLSSGIVIGSGGPFGAEGPIIMTGGSIASLLAQYLHLTAAERKTLLVSGACAGMTAIFGTPVAAVLLAIELLLFELRPR
SLLPVALACAVAGFLRPFVFEAGPLFPLQTAPASTLALGSCVLAGLLCGALGAGLTLALYRTEDAFDHLRLHWMWWPAIG
GLVVGIGGYFEPRALGVGYDVIGDLLNNRLLVEAAVALLAVKAVIWIAALGSGTSGGVLAPLLMLGAGLGVVLAPMLPGG
SPGLWALVCMAGVLGSVLGAPLTAIVFAFGLTHDSEALLPLLLTTAVAYGFSVLTMKRSIMTEKIARRGLHIYREYGVDP
LERAHVGELMTRDVVWIDASLPVTEALPRYFGDHAAHRAYPVLRDGRVIGMLQRAAIVAAHAGDDAGLTCGDLLADGANP
NAGPAVLLPAQTGRAAAGRMAELSVARLPVVEDEITMRLVGIVSLRDLMAPSSHVLHEETQRERLRGMAIKALGRTV

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081943, Length=353, Percent_Identity=30.3116147308782, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 66823; Mature: 66823

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCARRAAAYHATGARPANISWRDIFRRPAILPEKKPPPLMHTEVHTVEKRDYAVNGRLP
CCCCHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCEEECCCHH
MLAAIALGIGAISTGAAYVLVNLIHFFTNLFFFQTLSFADRSPAGHTLGPWVIVVPAIGG
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHH
LIVGLMARYGSDKIRGHGIPEAIEAVLFGKSKMSPKVAVLKPLSSGIVIGSGGPFGAEGP
HHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCCCCC
IIMTGGSIASLLAQYLHLTAAERKTLLVSGACAGMTAIFGTPVAAVLLAIELLLFELRPR
EEEECCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
SLLPVALACAVAGFLRPFVFEAGPLFPLQTAPASTLALGSCVLAGLLCGALGAGLTLALY
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
RTEDAFDHLRLHWMWWPAIGGLVVGIGGYFEPRALGVGYDVIGDLLNNRLLVEAAVALLA
ECCHHHHHHEEEEEEHHHHCCHHEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
VKAVIWIAALGSGTSGGVLAPLLMLGAGLGVVLAPMLPGGSPGLWALVCMAGVLGSVLGA
HHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC
PLTAIVFAFGLTHDSEALLPLLLTTAVAYGFSVLTMKRSIMTEKIARRGLHIYREYGVDP
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LERAHVGELMTRDVVWIDASLPVTEALPRYFGDHAAHRAYPVLRDGRVIGMLQRAAIVAA
HHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHEEE
HAGDDAGLTCGDLLADGANPNAGPAVLLPAQTGRAAAGRMAELSVARLPVVEDEITMRLV
ECCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCHHHCCHHHHHHHHCCCCCHHHHHHHH
GIVSLRDLMAPSSHVLHEETQRERLRGMAIKALGRTV
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLCARRAAAYHATGARPANISWRDIFRRPAILPEKKPPPLMHTEVHTVEKRDYAVNGRLP
CCCCHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCEEECCCHH
MLAAIALGIGAISTGAAYVLVNLIHFFTNLFFFQTLSFADRSPAGHTLGPWVIVVPAIGG
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHH
LIVGLMARYGSDKIRGHGIPEAIEAVLFGKSKMSPKVAVLKPLSSGIVIGSGGPFGAEGP
HHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCCCCC
IIMTGGSIASLLAQYLHLTAAERKTLLVSGACAGMTAIFGTPVAAVLLAIELLLFELRPR
EEEECCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
SLLPVALACAVAGFLRPFVFEAGPLFPLQTAPASTLALGSCVLAGLLCGALGAGLTLALY
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
RTEDAFDHLRLHWMWWPAIGGLVVGIGGYFEPRALGVGYDVIGDLLNNRLLVEAAVALLA
ECCHHHHHHEEEEEEHHHHCCHHEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
VKAVIWIAALGSGTSGGVLAPLLMLGAGLGVVLAPMLPGGSPGLWALVCMAGVLGSVLGA
HHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC
PLTAIVFAFGLTHDSEALLPLLLTTAVAYGFSVLTMKRSIMTEKIARRGLHIYREYGVDP
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LERAHVGELMTRDVVWIDASLPVTEALPRYFGDHAAHRAYPVLRDGRVIGMLQRAAIVAA
HHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHEEE
HAGDDAGLTCGDLLADGANPNAGPAVLLPAQTGRAAAGRMAELSVARLPVVEDEITMRLV
ECCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCHHHCCHHHHHHHHCCCCCHHHHHHHH
GIVSLRDLMAPSSHVLHEETQRERLRGMAIKALGRTV
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]