Click here to switch to the map view.

The map label for this gene is yjeS [H]

Identifier: 94309469

GI number: 94309469

Start: 559432

End: 560565

Strand: Reverse

Name: yjeS [H]

Synonym: Rmet_0524

Alternate gene names: 94309469

Gene position: 560565-559432 (Counterclockwise)

Preceding gene: 94309472

Following gene: 94309467

Centisome position: 14.27

GC content: 66.49

Gene sequence:

>1134_bases
GTGCCGTCCACGTCGTCCCCGCAAGCTGCCAGGGACTCTCTGGCGTCGCTGGTGGCACAGATTCGTGCCTGGGGGGGGGA
GCTCGGATTCGATGCGATCCGCATCGCCGATGTCGATCTGCGGCACGCCGAAGCGGGCCTGTTGGCGTGGTTGCAGGCGG
GCTACCACGGCGACATGGATTATATGGCCAACCACGGCACAAAGCGCGCCCGCCCGGCCGAACTGGTGCCCGGCACCGTG
CGCGCCATCGTCGCGCGCATGCCCTATCTGCCCATGCAGCGTGACGACGGCTGGCGCCGACACGAACTCGCCCGCCTCGA
CGACCCCTCGACTGCCGTGATCTCGCTTTACGCACGTGGCCGCGACTATCACAAGGTACTCCGCAACCGGCTGCAGCAGC
TGGCGGCCCGTATCGAGACCGCGATCGGCGCGTTTGGCTACCGCGTCTTCACCGATTCGGCCCCGGTCATGGAAGTGGCG
CTGGCCAGCCAGGGTGGCCTGGGCTGGCGCGGCAAGCACACGCTGCTGCTCGACCGCGATGGTGGTTCGATGTTCTTTCT
CGGCGAGATCCTCGTCGATATCCCGTTGCCCGCCGATTCGGCCGAGGCCCCGCACTGTGGCAACTGCCGCCGCTGCATTG
ACATCTGTCCGACCCAGGCCATCGTGGAGCCCTATCTGGTGGATGCGCGGCGTTGCATTTCCTATCTGACGATCGAACAC
AAGGGCGCTATTCCCGAAGACCTGCGCGCGCCGATGGGCAATCGCGTCTATGGTTGCGACGATTGCCAACTGACGTGCCC
TTGGAACAAGTTCGCTCATCGCGCCACGTTGCCGGACTTCGACGTGCGCAATGGCTTCGACGCGCCCGACATGGCAACAC
TATTCGATTGGAGCGAAGCAGAATTCAACCAGCGGCTCGAAGGCAGCCCGATCCGGCGGATCGGTCATGAACGCTGGCTG
CGCAACCTGGCCGTGGGCCTCGGCAACAGCCTGCGCGCCGCGGCGGTGAACGATCCGGCGCTGGCCGAACGCATCCGTGC
CTCACTCCGCGCGCGGCTCGATGCGGCCACGCCATTGGTGCGCGAGCATATCGAATGGGCGCTCGCGCAGGACCGGGCCC
CTGAGCGCGGCTAG

Upstream 100 bases:

>100_bases
TAGCGGCAGAATGCGTTCTTCGAGCAGGGGCATTGCGTACAATTCAGGAATGATCGACCGAGCAGTTCCCGCCTCCTCCC
CCGCGAAAGACCCCGTTCCG

Downstream 100 bases:

>100_bases
GCGGCCAGGCCGCTAGCTCACCAGCGACAGCCACACCGGCGTGGTCACGATCGCCACGACAGTCATCGCGGAAATCGTCG
CCGCCACCATCGGACCATTG

Product: putative Fe-S electron transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MPSTSSPQAARDSLASLVAQIRAWGGELGFDAIRIADVDLRHAEAGLLAWLQAGYHGDMDYMANHGTKRARPAELVPGTV
RAIVARMPYLPMQRDDGWRRHELARLDDPSTAVISLYARGRDYHKVLRNRLQQLAARIETAIGAFGYRVFTDSAPVMEVA
LASQGGLGWRGKHTLLLDRDGGSMFFLGEILVDIPLPADSAEAPHCGNCRRCIDICPTQAIVEPYLVDARRCISYLTIEH
KGAIPEDLRAPMGNRVYGCDDCQLTCPWNKFAHRATLPDFDVRNGFDAPDMATLFDWSEAEFNQRLEGSPIRRIGHERWL
RNLAVGLGNSLRAAAVNDPALAERIRASLRARLDAATPLVREHIEWALAQDRAPERG

Sequences:

>Translated_377_residues
MPSTSSPQAARDSLASLVAQIRAWGGELGFDAIRIADVDLRHAEAGLLAWLQAGYHGDMDYMANHGTKRARPAELVPGTV
RAIVARMPYLPMQRDDGWRRHELARLDDPSTAVISLYARGRDYHKVLRNRLQQLAARIETAIGAFGYRVFTDSAPVMEVA
LASQGGLGWRGKHTLLLDRDGGSMFFLGEILVDIPLPADSAEAPHCGNCRRCIDICPTQAIVEPYLVDARRCISYLTIEH
KGAIPEDLRAPMGNRVYGCDDCQLTCPWNKFAHRATLPDFDVRNGFDAPDMATLFDWSEAEFNQRLEGSPIRRIGHERWL
RNLAVGLGNSLRAAAVNDPALAERIRASLRARLDAATPLVREHIEWALAQDRAPERG
>Mature_376_residues
PSTSSPQAARDSLASLVAQIRAWGGELGFDAIRIADVDLRHAEAGLLAWLQAGYHGDMDYMANHGTKRARPAELVPGTVR
AIVARMPYLPMQRDDGWRRHELARLDDPSTAVISLYARGRDYHKVLRNRLQQLAARIETAIGAFGYRVFTDSAPVMEVAL
ASQGGLGWRGKHTLLLDRDGGSMFFLGEILVDIPLPADSAEAPHCGNCRRCIDICPTQAIVEPYLVDARRCISYLTIEHK
GAIPEDLRAPMGNRVYGCDDCQLTCPWNKFAHRATLPDFDVRNGFDAPDMATLFDWSEAEFNQRLEGSPIRRIGHERWLR
NLAVGLGNSLRAAAVNDPALAERIRASLRARLDAATPLVREHIEWALAQDRAPERG

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=358, Percent_Identity=52.7932960893855, Blast_Score=380, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013542
- InterPro:   IPR009051 [H]

Pfam domain/function: PF08331 DUF1730 [H]

EC number: NA

Molecular weight: Translated: 41820; Mature: 41689

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSTSSPQAARDSLASLVAQIRAWGGELGFDAIRIADVDLRHAEAGLLAWLQAGYHGDMD
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHH
YMANHGTKRARPAELVPGTVRAIVARMPYLPMQRDDGWRRHELARLDDPSTAVISLYARG
HHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHEEEHHHCC
RDYHKVLRNRLQQLAARIETAIGAFGYRVFTDSAPVMEVALASQGGLGWRGKHTLLLDRD
CHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCCCCCCCCEEEEEECC
GGSMFFLGEILVDIPLPADSAEAPHCGNCRRCIDICPTQAIVEPYLVDARRCISYLTIEH
CCCEEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECC
KGAIPEDLRAPMGNRVYGCDDCQLTCPWNKFAHRATLPDFDVRNGFDAPDMATLFDWSEA
CCCCCHHHHCCCCCCEECCCCCEEECCHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCHH
EFNQRLEGSPIRRIGHERWLRNLAVGLGNSLRAAAVNDPALAERIRASLRARLDAATPLV
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH
REHIEWALAQDRAPERG
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PSTSSPQAARDSLASLVAQIRAWGGELGFDAIRIADVDLRHAEAGLLAWLQAGYHGDMD
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHH
YMANHGTKRARPAELVPGTVRAIVARMPYLPMQRDDGWRRHELARLDDPSTAVISLYARG
HHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHEEEHHHCC
RDYHKVLRNRLQQLAARIETAIGAFGYRVFTDSAPVMEVALASQGGLGWRGKHTLLLDRD
CHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCCCCCCCCEEEEEECC
GGSMFFLGEILVDIPLPADSAEAPHCGNCRRCIDICPTQAIVEPYLVDARRCISYLTIEH
CCCEEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECC
KGAIPEDLRAPMGNRVYGCDDCQLTCPWNKFAHRATLPDFDVRNGFDAPDMATLFDWSEA
CCCCCHHHHCCCCCCEECCCCCEEECCHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCHH
EFNQRLEGSPIRRIGHERWLRNLAVGLGNSLRAAAVNDPALAERIRASLRARLDAATPLV
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH
REHIEWALAQDRAPERG
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]