| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is hexR [C]
Identifier: 94309288
GI number: 94309288
Start: 361413
End: 362309
Strand: Reverse
Name: hexR [C]
Synonym: Rmet_0343
Alternate gene names: 94309288
Gene position: 362309-361413 (Counterclockwise)
Preceding gene: 94309292
Following gene: 94309282
Centisome position: 9.22
GC content: 67.67
Gene sequence:
>897_bases ATGCCCGCCTCCACGCCCAAGCCGCCGCAGTCGCTCGATGCGCTGCTGGCGCAACTCCGCGCCGATTTCCCGAATCTGAG CGCGCAGTTCCAGAGTGGCGCCAGATACCTGCTCGATCACCCGCGCGATATTGCTATCCAGTCGATGCGCAAGGTGGCCG GCAACGCCGGGGTGCAGCCCGCCACGCTGGTGCGACTGTCGCAGGCGCTCGGGTTCGAAGGCTGGCAGGGATTGCGCGAA CTGTTCGTCGAGGCAGTGCGCGACGGCGACAGCCAGCCTTACGCCAGGCGCGCCCGCAAGGTGGTGCGGGAAAGTGGCTC GAGCCGCATGTTCGCGGAAATGATCGAAGTGCAGCATCACAACCTCGACGCGCTGCTGGCCAGCAACGCCGACGCGCTGC CACGTGCGGCCGAACTGCTGGCGGCCGCACCGATGGTCCACGTGGCGGGCTTCCGCTCGTGCTTTCCAATCGCGTTCTCG TTCCACTACATCTACGGGCTGTTCCGCAGCTCGGTGCGCCTGATCCGTGGCGACGCAGGCACGCTGGAGATGGAACTGCG CGCCTTGAGCCCCAAGGATGCGGTGCTGGTAGCCGGCTTCGCGCCCTACTCGCAGGAAAGCATGCGCGTGGCCACCGCCG CACGCGAGGCGGGCTGCACGGTGATCGCCTTGACCGACAGTACGGTGGCGCCAATCGCGCTGGAAGCCGATTGCACACTG CTCTTCGCCATCGACAGCCCATCGTTCTTCCCGTCGATCACCAGCGGCGTGGCGATGGTGGAGGCGCTGGTCGAGCATCT GCTGGCAAAGAAGGGCAAGGGGGCGATCCGGGCGCTGGAGCAGACGGAGGGGCAGCTGCACCGGACGGGGGCCTACCTCC CGTCGCGGCGCGGCTGA
Upstream 100 bases:
>100_bases TACGATGCCCCACCGGTGCCCCCCGTTCACAACACAAGGGCGCCCTGCGGCGGGCCAAGCTGTGCAACAATCGTTGCATC ACAAGAATCCTGAACCAGAG
Downstream 100 bases:
>100_bases AACGCCAGTGCGTTACTCGAACGCCTCATCATTCGGATTGGCGTAGGCCTTCTTGATCTGCTCGCTCTGCGGCAAGTCGA AGCTGAGGTTCTTCGGCGGC
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; SIS Domain Protein; SIS Family Regulator; SIS Domain-Containing Protein; Sugar Isomerase; Bifunctional Protein Glk; Transcriptional Regulator Rpir Family; Transcriptional Regulator IolR; Transcription Regulator Protein; GlvR Family Transcriptional Regulator; RpiR Family Regulatory; Transcriptional Regulator Protein; RipR Family Transcriptional Regulator; HTH/SIS Domain-Containing Protein; Transcriptional Regulator RpiR Family Protein; Helix-Turn-Helix Domain RpiR Family
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MPASTPKPPQSLDALLAQLRADFPNLSAQFQSGARYLLDHPRDIAIQSMRKVAGNAGVQPATLVRLSQALGFEGWQGLRE LFVEAVRDGDSQPYARRARKVVRESGSSRMFAEMIEVQHHNLDALLASNADALPRAAELLAAAPMVHVAGFRSCFPIAFS FHYIYGLFRSSVRLIRGDAGTLEMELRALSPKDAVLVAGFAPYSQESMRVATAAREAGCTVIALTDSTVAPIALEADCTL LFAIDSPSFFPSITSGVAMVEALVEHLLAKKGKGAIRALEQTEGQLHRTGAYLPSRRG
Sequences:
>Translated_298_residues MPASTPKPPQSLDALLAQLRADFPNLSAQFQSGARYLLDHPRDIAIQSMRKVAGNAGVQPATLVRLSQALGFEGWQGLRE LFVEAVRDGDSQPYARRARKVVRESGSSRMFAEMIEVQHHNLDALLASNADALPRAAELLAAAPMVHVAGFRSCFPIAFS FHYIYGLFRSSVRLIRGDAGTLEMELRALSPKDAVLVAGFAPYSQESMRVATAAREAGCTVIALTDSTVAPIALEADCTL LFAIDSPSFFPSITSGVAMVEALVEHLLAKKGKGAIRALEQTEGQLHRTGAYLPSRRG >Mature_297_residues PASTPKPPQSLDALLAQLRADFPNLSAQFQSGARYLLDHPRDIAIQSMRKVAGNAGVQPATLVRLSQALGFEGWQGLREL FVEAVRDGDSQPYARRARKVVRESGSSRMFAEMIEVQHHNLDALLASNADALPRAAELLAAAPMVHVAGFRSCFPIAFSF HYIYGLFRSSVRLIRGDAGTLEMELRALSPKDAVLVAGFAPYSQESMRVATAAREAGCTVIALTDSTVAPIALEADCTLL FAIDSPSFFPSITSGVAMVEALVEHLLAKKGKGAIRALEQTEGQLHRTGAYLPSRRG
Specific function: Represses The Expression Of The Hex Regulon (Zwf, Eda, Glp And Gap) (By Similarity). [C]
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32132; Mature: 32001
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASTPKPPQSLDALLAQLRADFPNLSAQFQSGARYLLDHPRDIAIQSMRKVAGNAGVQP CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCCH ATLVRLSQALGFEGWQGLRELFVEAVRDGDSQPYARRARKVVRESGSSRMFAEMIEVQHH HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHC NLDALLASNADALPRAAELLAAAPMVHVAGFRSCFPIAFSFHYIYGLFRSSVRLIRGDAG CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TLEMELRALSPKDAVLVAGFAPYSQESMRVATAAREAGCTVIALTDSTVAPIALEADCTL CEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCEE LFAIDSPSFFPSITSGVAMVEALVEHLLAKKGKGAIRALEQTEGQLHRTGAYLPSRRG EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCC >Mature Secondary Structure PASTPKPPQSLDALLAQLRADFPNLSAQFQSGARYLLDHPRDIAIQSMRKVAGNAGVQP CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCCH ATLVRLSQALGFEGWQGLRELFVEAVRDGDSQPYARRARKVVRESGSSRMFAEMIEVQHH HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHC NLDALLASNADALPRAAELLAAAPMVHVAGFRSCFPIAFSFHYIYGLFRSSVRLIRGDAG CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TLEMELRALSPKDAVLVAGFAPYSQESMRVATAAREAGCTVIALTDSTVAPIALEADCTL CEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCEE LFAIDSPSFFPSITSGVAMVEALVEHLLAKKGKGAIRALEQTEGQLHRTGAYLPSRRG EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA