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The map label for this gene is 94309269

Identifier: 94309269

GI number: 94309269

Start: 342116

End: 344119

Strand: Direct

Name: 94309269

Synonym: Rmet_0324

Alternate gene names: NA

Gene position: 342116-344119 (Clockwise)

Preceding gene: 94309262

Following gene: 94309270

Centisome position: 8.71

GC content: 60.68

Gene sequence:

>2004_bases
ATGGCGGCCGTAGGCCGCCTGGAAGCACCCGCAGGAGACGACTGGATCGAGAACGGAAGGCAACTGATTGGCAAGGCGAA
AGCTCTGATGCCGTTCGGGGATGTCGAGTGGGATGCCCCGGTCTGGGATGTCTCGGCTGCCTATGAGCATCGCACGCGAG
GATACAAGGCCAATGCCCGGGGATTACGACTGCCATTTACTCAGCACAGGCAAGCGGGGAAGGGGGTGGGCGATCCGTTG
CCAGAGGGCTTTGCCGATGTCGTCAAGGCGCTTGTGTGCATGCGCCATCAAAGACGCGGCCAGTCCATGGCGAGCCACAG
CGTCTTTATCCGTGCTGCACGCTACATCTGCGACGCCATCCGAGGGACCGGGCATCAACTAGGTGAGTTGCGCAAGGATG
ATCTGGATAGGGCGGCGACCGTGCTTCTACGCAGAGAGCGGGAGACCTCGGCATACAAGGTACTTGGCCACATGGAGGAG
TTCGCCGATATGGTGGACGGATACCGGCTCAGTCGAATGAGGCTGGACTGGCGCTGCCGGCGAAAAGCACGGCCGCGGTC
ACTGACGCCCGACAGGATTGGAGACCCCTCGACAGAAGTATCGGACAGGCTGCCAACAGAAGAAGCGATCCGGGCGCTTG
GATGGCTCTACCAGACGATCCCGCGAGCCGAACGCCCTGACGATGGGCGCGCCGCGGACCGCACACTGATTCTGATCGCC
ACGATCATGGCATGTACGGGCCTGAGAGTTGGCGAGATGCTGACGTTGCCGGTGAATCCCATCTCCATTGCGAAGGATGG
CAGTCGGAACCTGCGCTATGCAAGGCTGAAAGGACGGGCTGACGACGTGATGGTCGAATGGCATTCGAAGCCATTGCTAT
CCGAGACTGTGGAGTTGGTGGAGGCAGCGGTGGCGGAACTGCGCGAGGCAACCGCGGGGCCGAGACAGGTTGCCCTGAAG
GCCAGCCGCTGCGGATCTCTGATGCCGCGAAGTGCTCTTCCCCCAGTTCTATTCACGTCTGATCTACGAGCCGTTCTTGG
GTTGAACAGTTGGAAACTTGCTCAGTTCCTGCGGGCTCGTGCGATTCCCTTCGAAATCGTGGATCGACGGCTGCGCGTGA
ACCGCGATGCGCTGTGCAGAGGTATTGAGAAGGACCACTGGTTCGGACCAGTGATTCCGGGCCCTCCCAGTCAAGGCCTC
AAGCTCCACCAAGCGCTATGCGTGGTCTACGCGAACCAGTTCCATCGCGGGACGCGGACGACGCTTACATATGCAGCCCG
GCCGGTGTCAGACCAGAACGTGCAGGACTTCCTGGCCGGTCGGCCCGCCATCCCATCGGCGTTCGAGCGGTATGGACTCG
TGGGCGAAGACGGCTTGGTACTACGTGTTCGATCACATGGACTCCGGCACTTCCTGAACCATCTGCTCGACGAAGGTGGA
GCACCGGACCTGGTGCAAACGAAGTGGTTTGGTCGCCAGCATGAGGCGGATACTCGAGCCTACCAACATCTGACGGCTGC
CCAGCGCGCGGCGCAGGTGGTTAAGGAGGTTCTGGAGGGAAAACTAGCGGGTGGCATCGTTGAGGTAGCCAAATCTCTCC
CGCTGGAGGTAGCCAAGACATTCCTGGCCGCACGCATTCAGGCAGTCCACGATGTGGGGCCGGGTCTGTGCGTCCATGAC
TTCCAGATGTCTCCTTGTGAGCGCCACCTGCAATGTACGGCGAAGTGCGAGGACTACCTGTGGATCAAGGGCGAAGAGGC
CAGAGCACATGAACTGAAGAGACAAGCCGCAGTGGCATACATCAGCCTGCGTACGGTGACGGCCCGCGCGCGGTCGCGAT
CCTTGATGCAGTCGGATTGGTATCGACACATTGCGACTCGATATGGCCAACTGATGGAGCAACTGGCCACGATAGGCTTC
CATCAAGCTGATCTGGTGCGATACGTGGAGGGGTGCGGAGATGCCGACAAGGATTCGCGCGAGCGCGAAGATGAGCGAGC
GTAA

Upstream 100 bases:

>100_bases
CGCCTGTCAGTTCAGATGGATGAAGTGATCTACGCCGTAGCGGAGGTTGTTCAACTGGTGGCTCACCATGCCAAACGGAA
CGGCGGTAAGGCGTAAGACG

Downstream 100 bases:

>100_bases
GAAGGCCTGCATCATCGCCGAGCTTGAACGCTGGCAGGATAGGGAGTTGGGCACACGGCTGACCTGGGAGCGTGTCGAAG
CGTTCTCCGGATACACCCGT

Product: putative integrase

Products: NA

Alternate protein names: Integrase Family Protein; Phage Integrase

Number of amino acids: Translated: 667; Mature: 666

Protein sequence:

>667_residues
MAAVGRLEAPAGDDWIENGRQLIGKAKALMPFGDVEWDAPVWDVSAAYEHRTRGYKANARGLRLPFTQHRQAGKGVGDPL
PEGFADVVKALVCMRHQRRGQSMASHSVFIRAARYICDAIRGTGHQLGELRKDDLDRAATVLLRRERETSAYKVLGHMEE
FADMVDGYRLSRMRLDWRCRRKARPRSLTPDRIGDPSTEVSDRLPTEEAIRALGWLYQTIPRAERPDDGRAADRTLILIA
TIMACTGLRVGEMLTLPVNPISIAKDGSRNLRYARLKGRADDVMVEWHSKPLLSETVELVEAAVAELREATAGPRQVALK
ASRCGSLMPRSALPPVLFTSDLRAVLGLNSWKLAQFLRARAIPFEIVDRRLRVNRDALCRGIEKDHWFGPVIPGPPSQGL
KLHQALCVVYANQFHRGTRTTLTYAARPVSDQNVQDFLAGRPAIPSAFERYGLVGEDGLVLRVRSHGLRHFLNHLLDEGG
APDLVQTKWFGRQHEADTRAYQHLTAAQRAAQVVKEVLEGKLAGGIVEVAKSLPLEVAKTFLAARIQAVHDVGPGLCVHD
FQMSPCERHLQCTAKCEDYLWIKGEEARAHELKRQAAVAYISLRTVTARARSRSLMQSDWYRHIATRYGQLMEQLATIGF
HQADLVRYVEGCGDADKDSREREDERA

Sequences:

>Translated_667_residues
MAAVGRLEAPAGDDWIENGRQLIGKAKALMPFGDVEWDAPVWDVSAAYEHRTRGYKANARGLRLPFTQHRQAGKGVGDPL
PEGFADVVKALVCMRHQRRGQSMASHSVFIRAARYICDAIRGTGHQLGELRKDDLDRAATVLLRRERETSAYKVLGHMEE
FADMVDGYRLSRMRLDWRCRRKARPRSLTPDRIGDPSTEVSDRLPTEEAIRALGWLYQTIPRAERPDDGRAADRTLILIA
TIMACTGLRVGEMLTLPVNPISIAKDGSRNLRYARLKGRADDVMVEWHSKPLLSETVELVEAAVAELREATAGPRQVALK
ASRCGSLMPRSALPPVLFTSDLRAVLGLNSWKLAQFLRARAIPFEIVDRRLRVNRDALCRGIEKDHWFGPVIPGPPSQGL
KLHQALCVVYANQFHRGTRTTLTYAARPVSDQNVQDFLAGRPAIPSAFERYGLVGEDGLVLRVRSHGLRHFLNHLLDEGG
APDLVQTKWFGRQHEADTRAYQHLTAAQRAAQVVKEVLEGKLAGGIVEVAKSLPLEVAKTFLAARIQAVHDVGPGLCVHD
FQMSPCERHLQCTAKCEDYLWIKGEEARAHELKRQAAVAYISLRTVTARARSRSLMQSDWYRHIATRYGQLMEQLATIGF
HQADLVRYVEGCGDADKDSREREDERA
>Mature_666_residues
AAVGRLEAPAGDDWIENGRQLIGKAKALMPFGDVEWDAPVWDVSAAYEHRTRGYKANARGLRLPFTQHRQAGKGVGDPLP
EGFADVVKALVCMRHQRRGQSMASHSVFIRAARYICDAIRGTGHQLGELRKDDLDRAATVLLRRERETSAYKVLGHMEEF
ADMVDGYRLSRMRLDWRCRRKARPRSLTPDRIGDPSTEVSDRLPTEEAIRALGWLYQTIPRAERPDDGRAADRTLILIAT
IMACTGLRVGEMLTLPVNPISIAKDGSRNLRYARLKGRADDVMVEWHSKPLLSETVELVEAAVAELREATAGPRQVALKA
SRCGSLMPRSALPPVLFTSDLRAVLGLNSWKLAQFLRARAIPFEIVDRRLRVNRDALCRGIEKDHWFGPVIPGPPSQGLK
LHQALCVVYANQFHRGTRTTLTYAARPVSDQNVQDFLAGRPAIPSAFERYGLVGEDGLVLRVRSHGLRHFLNHLLDEGGA
PDLVQTKWFGRQHEADTRAYQHLTAAQRAAQVVKEVLEGKLAGGIVEVAKSLPLEVAKTFLAARIQAVHDVGPGLCVHDF
QMSPCERHLQCTAKCEDYLWIKGEEARAHELKRQAAVAYISLRTVTARARSRSLMQSDWYRHIATRYGQLMEQLATIGFH
QADLVRYVEGCGDADKDSREREDERA

Specific function: Unknown

COG id: COG4688

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74657; Mature: 74526

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVGRLEAPAGDDWIENGRQLIGKAKALMPFGDVEWDAPVWDVSAAYEHRTRGYKANAR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
GLRLPFTQHRQAGKGVGDPLPEGFADVVKALVCMRHQRRGQSMASHSVFIRAARYICDAI
CCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGTGHQLGELRKDDLDRAATVLLRRERETSAYKVLGHMEEFADMVDGYRLSRMRLDWRCR
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RKARPRSLTPDRIGDPSTEVSDRLPTEEAIRALGWLYQTIPRAERPDDGRAADRTLILIA
HCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
TIMACTGLRVGEMLTLPVNPISIAKDGSRNLRYARLKGRADDVMVEWHSKPLLSETVELV
HHHHHCCCCCCCEEEECCCCCEECCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHH
EAAVAELREATAGPRQVALKASRCGSLMPRSALPPVLFTSDLRAVLGLNSWKLAQFLRAR
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
AIPFEIVDRRLRVNRDALCRGIEKDHWFGPVIPGPPSQGLKLHQALCVVYANQFHRGTRT
CCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
TLTYAARPVSDQNVQDFLAGRPAIPSAFERYGLVGEDGLVLRVRSHGLRHFLNHLLDEGG
EEEEEECCCCCCCHHHHHCCCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC
APDLVQTKWFGRQHEADTRAYQHLTAAQRAAQVVKEVLEGKLAGGIVEVAKSLPLEVAKT
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FLAARIQAVHDVGPGLCVHDFQMSPCERHLQCTAKCEDYLWIKGEEARAHELKRQAAVAY
HHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH
ISLRTVTARARSRSLMQSDWYRHIATRYGQLMEQLATIGFHQADLVRYVEGCGDADKDSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHH
EREDERA
HHHCCCC
>Mature Secondary Structure 
AAVGRLEAPAGDDWIENGRQLIGKAKALMPFGDVEWDAPVWDVSAAYEHRTRGYKANAR
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
GLRLPFTQHRQAGKGVGDPLPEGFADVVKALVCMRHQRRGQSMASHSVFIRAARYICDAI
CCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGTGHQLGELRKDDLDRAATVLLRRERETSAYKVLGHMEEFADMVDGYRLSRMRLDWRCR
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RKARPRSLTPDRIGDPSTEVSDRLPTEEAIRALGWLYQTIPRAERPDDGRAADRTLILIA
HCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
TIMACTGLRVGEMLTLPVNPISIAKDGSRNLRYARLKGRADDVMVEWHSKPLLSETVELV
HHHHHCCCCCCCEEEECCCCCEECCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHH
EAAVAELREATAGPRQVALKASRCGSLMPRSALPPVLFTSDLRAVLGLNSWKLAQFLRAR
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
AIPFEIVDRRLRVNRDALCRGIEKDHWFGPVIPGPPSQGLKLHQALCVVYANQFHRGTRT
CCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
TLTYAARPVSDQNVQDFLAGRPAIPSAFERYGLVGEDGLVLRVRSHGLRHFLNHLLDEGG
EEEEEECCCCCCCHHHHHCCCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC
APDLVQTKWFGRQHEADTRAYQHLTAAQRAAQVVKEVLEGKLAGGIVEVAKSLPLEVAKT
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FLAARIQAVHDVGPGLCVHDFQMSPCERHLQCTAKCEDYLWIKGEEARAHELKRQAAVAY
HHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH
ISLRTVTARARSRSLMQSDWYRHIATRYGQLMEQLATIGFHQADLVRYVEGCGDADKDSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHH
EREDERA
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA