| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is yhbN [C]
Identifier: 94309250
GI number: 94309250
Start: 321037
End: 321681
Strand: Reverse
Name: yhbN [C]
Synonym: Rmet_0305
Alternate gene names: 94309250
Gene position: 321681-321037 (Counterclockwise)
Preceding gene: 94309251
Following gene: 94309249
Centisome position: 8.19
GC content: 66.2
Gene sequence:
>645_bases ATGACTGCTTCCCTGACGACATCGTCCTGTCGCCGCACCGCGCCCGCCCTGATGGCGGCCATCGCCGCCATCGGCCTGTT CCTGGCCCAGCCTGCTTTCGCCGAGCGCGCGGACCAGACCAAGCCGCTGGTGCTGGAAGCCGACAATGCCAGCTACGATG ACGTCAAGCAGATCTACACTCTGACCGGCAACGTGGTGCTGACCAAGGGCACGATGGTGCTGAAGTCTGACGCCGCCGAA CTCCGCACCGACCCCGAGGGTTACCAGTACGCCATCGCCACCTCCAAGCCGGGCCGCCAGGCCTATATCCGCCAGAAACG CGACGGCGTGGACGAGTACATCGACGGCTGGGGTGACCGCATCGAATACGACGGCAAGTCGGAGATCAACAAGCTGATCG GCAATGCACGCGCGGCGCGTGTTTCCGGTGTCGGCGCGAAGATCCTGGATGAAATCCGCGGCGCGGTAATCACGTACGAC AGCCGCAATGAGTTCTATACCGCAACCGGCGGCGACAACAACGCGTCAGCCGGGAACCCTTCTGGCCGCGTGCGCGCTGT GCTGTCGCCGCGCGCGAACCAGGCCAGCGCGCCCGCCGGCGCGCCGCTCGACCTGAAGCCGTCCTCACAGCCGGCCAAGC CCTGA
Upstream 100 bases:
>100_bases TCATCATGAATTCGCCGGGGCAGGCCAGCGCCCAGTGACATCGGGATTTGCGCCCCACCGTCCGCCTGACTGCTGCCTTC CCCTTTCAGCAAAGCCAAAA
Downstream 100 bases:
>100_bases CCGTTTCAAGCTCTATCCGTACCCGATGAACGATACCGCCACGCTCGCCGATCAGGCTTCTTCCGCCCCATCCACGGATA GCAGCACGCTGGTCGTGCGC
Product: OstA-like protein
Products: NA
Alternate protein names: OstA-Like Protein; OstA Family Protein; OstA-Like Family Protein; Signal Peptide Protein; Cell Envelope Biogenesis Protein YhbN; Lipopolysaccharide Transport Periplasmic Protein Lpta; Protein YhbN; Exported Protein
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTASLTTSSCRRTAPALMAAIAAIGLFLAQPAFAERADQTKPLVLEADNASYDDVKQIYTLTGNVVLTKGTMVLKSDAAE LRTDPEGYQYAIATSKPGRQAYIRQKRDGVDEYIDGWGDRIEYDGKSEINKLIGNARAARVSGVGAKILDEIRGAVITYD SRNEFYTATGGDNNASAGNPSGRVRAVLSPRANQASAPAGAPLDLKPSSQPAKP
Sequences:
>Translated_214_residues MTASLTTSSCRRTAPALMAAIAAIGLFLAQPAFAERADQTKPLVLEADNASYDDVKQIYTLTGNVVLTKGTMVLKSDAAE LRTDPEGYQYAIATSKPGRQAYIRQKRDGVDEYIDGWGDRIEYDGKSEINKLIGNARAARVSGVGAKILDEIRGAVITYD SRNEFYTATGGDNNASAGNPSGRVRAVLSPRANQASAPAGAPLDLKPSSQPAKP >Mature_213_residues TASLTTSSCRRTAPALMAAIAAIGLFLAQPAFAERADQTKPLVLEADNASYDDVKQIYTLTGNVVLTKGTMVLKSDAAEL RTDPEGYQYAIATSKPGRQAYIRQKRDGVDEYIDGWGDRIEYDGKSEINKLIGNARAARVSGVGAKILDEIRGAVITYDS RNEFYTATGGDNNASAGNPSGRVRAVLSPRANQASAPAGAPLDLKPSSQPAKP
Specific function: Unknown
COG id: COG1934
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22710; Mature: 22578
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASLTTSSCRRTAPALMAAIAAIGLFLAQPAFAERADQTKPLVLEADNASYDDVKQIYT CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHH LTGNVVLTKGTMVLKSDAAELRTDPEGYQYAIATSKPGRQAYIRQKRDGVDEYIDGWGDR HCCCEEEECCEEEEECCHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHCCCCE IEYDGKSEINKLIGNARAARVSGVGAKILDEIRGAVITYDSRNEFYTATGGDNNASAGNP ECCCCHHHHHHHHCCCHHHHHCCCCHHHHHHHCCEEEEEECCCCEEEECCCCCCCCCCCC SGRVRAVLSPRANQASAPAGAPLDLKPSSQPAKP CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TASLTTSSCRRTAPALMAAIAAIGLFLAQPAFAERADQTKPLVLEADNASYDDVKQIYT CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHH LTGNVVLTKGTMVLKSDAAELRTDPEGYQYAIATSKPGRQAYIRQKRDGVDEYIDGWGDR HCCCEEEECCEEEEECCHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHCCCCE IEYDGKSEINKLIGNARAARVSGVGAKILDEIRGAVITYDSRNEFYTATGGDNNASAGNP ECCCCHHHHHHHHCCCHHHHHCCCCHHHHHHHCCEEEEEECCCCEEEECCCCCCCCCCCC SGRVRAVLSPRANQASAPAGAPLDLKPSSQPAKP CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA