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The map label for this gene is yhbJ [C]

Identifier: 94309242

GI number: 94309242

Start: 314690

End: 315580

Strand: Reverse

Name: yhbJ [C]

Synonym: Rmet_0297

Alternate gene names: 94309242

Gene position: 315580-314690 (Counterclockwise)

Preceding gene: 94309243

Following gene: 94309241

Centisome position: 8.03

GC content: 62.18

Gene sequence:

>891_bases
ATGCGGATCATCCTTATCACCGGAATTTCCGGCTCAGGCAAGTCAGTCGCGCTGAACGTACTGGAGGACGCGGGGTACTA
CTGCGTCGACAACTTGCCGGCCCAGTTCATCCCCGATCTCGCCTGCTATCTGGCGGATCAGGGTTACTCACAGCTTGGTG
TCGCCACCGACATTCGCAGCCGCGAATCGCTCGCGCGACTGCCCGATACGGTGCGAGAGCTGGCCGCGAACCATCAGGTA
CAGGTGCTGTACCTGACCGCCAGCACCGATGCGCTGGTTCAGCGCTACTCGGAAACGCGCCGGCGCCACCCGCTTTCGGC
ACAAGTCGACGTTGGCGCGGCCGCTGGCACGCCCAACGATACCTCGCTGATCGAGGCCATCGAGAAGGAGCGGGAGCTGC
TAAGCCCGCTGGCGGAATCGGCTCACCGCATCGACACCAGCAACGTGCGCACCAATACGCTGCGCAGCTGGATCAAGGAA
CTGATTCAAGACGAGAACGAGAACAAGAACAGCCAGCAGCTCACGCTGCTGTTTGAATCGTTCGGGTTCAAGCACGGCGT
GCCCAGCGACGCCGATCTCGTCTTCGACGTGCGCTCCCTGCCGAACCCCTATTACGATCTCGCGCTGCGCCCGCTCACTG
GGCGCGATGCGCCAGTCATCGACTTCCTGCAGAGCCAGCCAATGGTGCTGGCCATGGCCGAGGATATCCGCGCCTATGTG
GAGAAGTGGCTGCCGAGTTTCATTGCGGACAACCGCAGCTACCTGACCGTCACCATCGGCTGCACCGGAGGCCAGCACCG
TTCCGTGTTCATCGCGGAAAGACTTGCCAACTACTTCCGGGCACATGGTAATGTGCTGGTCAGACACCGCGAGTTGGCCC
CCGCTGGCTGA

Upstream 100 bases:

>100_bases
AGATCCCGTGGCAATGATGGCGAATCGGCGACGATTCGCCATTTTGCTTTAGGGAAGGTGTCATGACGCCGCCATCACGC
GATGCTATGCTTGCATCGCT

Downstream 100 bases:

>100_bases
CGCGCGGCGCCCCGCCGTTTTCCCATGACTGGAGCCGGCCAACCGCATGTCGACCTTTCTTTCCGGCACCGCATCCGATT
CCGCTACCCTGGATGCGCTG

Product: glmZ(sRNA)-inactivating NTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MRIILITGISGSGKSVALNVLEDAGYYCVDNLPAQFIPDLACYLADQGYSQLGVATDIRSRESLARLPDTVRELAANHQV
QVLYLTASTDALVQRYSETRRRHPLSAQVDVGAAAGTPNDTSLIEAIEKERELLSPLAESAHRIDTSNVRTNTLRSWIKE
LIQDENENKNSQQLTLLFESFGFKHGVPSDADLVFDVRSLPNPYYDLALRPLTGRDAPVIDFLQSQPMVLAMAEDIRAYV
EKWLPSFIADNRSYLTVTIGCTGGQHRSVFIAERLANYFRAHGNVLVRHRELAPAG

Sequences:

>Translated_296_residues
MRIILITGISGSGKSVALNVLEDAGYYCVDNLPAQFIPDLACYLADQGYSQLGVATDIRSRESLARLPDTVRELAANHQV
QVLYLTASTDALVQRYSETRRRHPLSAQVDVGAAAGTPNDTSLIEAIEKERELLSPLAESAHRIDTSNVRTNTLRSWIKE
LIQDENENKNSQQLTLLFESFGFKHGVPSDADLVFDVRSLPNPYYDLALRPLTGRDAPVIDFLQSQPMVLAMAEDIRAYV
EKWLPSFIADNRSYLTVTIGCTGGQHRSVFIAERLANYFRAHGNVLVRHRELAPAG
>Mature_296_residues
MRIILITGISGSGKSVALNVLEDAGYYCVDNLPAQFIPDLACYLADQGYSQLGVATDIRSRESLARLPDTVRELAANHQV
QVLYLTASTDALVQRYSETRRRHPLSAQVDVGAAAGTPNDTSLIEAIEKERELLSPLAESAHRIDTSNVRTNTLRSWIKE
LIQDENENKNSQQLTLLFESFGFKHGVPSDADLVFDVRSLPNPYYDLALRPLTGRDAPVIDFLQSQPMVLAMAEDIRAYV
EKWLPSFIADNRSYLTVTIGCTGGQHRSVFIAERLANYFRAHGNVLVRHRELAPAG

Specific function: Displays ATPase and GTPase activities

COG id: COG1660

COG function: function code R; Predicted P-loop-containing kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0042 family

Homologues:

Organism=Escherichia coli, GI1789598, Length=302, Percent_Identity=47.3509933774834, Blast_Score=254, Evalue=5e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y297_RALME (Q1LRP3)

Other databases:

- EMBL:   CP000352
- RefSeq:   YP_582452.1
- STRING:   Q1LRP3
- GeneID:   4037084
- GenomeReviews:   CP000352_GR
- KEGG:   rme:Rmet_0297
- eggNOG:   COG1660
- HOGENOM:   HBG289732
- OMA:   GIGCTGG
- PhylomeDB:   Q1LRP3
- ProtClustDB:   PRK05416
- BioCyc:   RMET266264:RMET_0297-MONOMER
- HAMAP:   MF_00636
- InterPro:   IPR005337
- PIRSF:   PIRSF005052

Pfam domain/function: PF03668 ATP_bind_2

EC number: NA

Molecular weight: Translated: 32857; Mature: 32857

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIILITGISGSGKSVALNVLEDAGYYCVDNLPAQFIPDLACYLADQGYSQLGVATDIRS
CEEEEEECCCCCCCEEEEEEHHCCCEEEECCCCHHHHHHHHHHHHCCCCHHCCHHHHHHH
RESLARLPDTVRELAANHQVQVLYLTASTDALVQRYSETRRRHPLSAQVDVGAAAGTPND
HHHHHHCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCH
TSLIEAIEKERELLSPLAESAHRIDTSNVRTNTLRSWIKELIQDENENKNSQQLTLLFES
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHEEHHHHH
FGFKHGVPSDADLVFDVRSLPNPYYDLALRPLTGRDAPVIDFLQSQPMVLAMAEDIRAYV
CCCCCCCCCCCCEEEEHHHCCCCCHHEEEECCCCCCCHHHHHHCCCCEEEHHHHHHHHHH
EKWLPSFIADNRSYLTVTIGCTGGQHRSVFIAERLANYFRAHGNVLVRHRELAPAG
HHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCC
>Mature Secondary Structure
MRIILITGISGSGKSVALNVLEDAGYYCVDNLPAQFIPDLACYLADQGYSQLGVATDIRS
CEEEEEECCCCCCCEEEEEEHHCCCEEEECCCCHHHHHHHHHHHHCCCCHHCCHHHHHHH
RESLARLPDTVRELAANHQVQVLYLTASTDALVQRYSETRRRHPLSAQVDVGAAAGTPND
HHHHHHCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCH
TSLIEAIEKERELLSPLAESAHRIDTSNVRTNTLRSWIKELIQDENENKNSQQLTLLFES
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHEEHHHHH
FGFKHGVPSDADLVFDVRSLPNPYYDLALRPLTGRDAPVIDFLQSQPMVLAMAEDIRAYV
CCCCCCCCCCCCEEEEHHHCCCCCHHEEEECCCCCCCHHHHHHCCCCEEEHHHHHHHHHH
EKWLPSFIADNRSYLTVTIGCTGGQHRSVFIAERLANYFRAHGNVLVRHRELAPAG
HHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA