| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94309241
Identifier: 94309241
GI number: 94309241
Start: 313990
End: 314643
Strand: Reverse
Name: 94309241
Synonym: Rmet_0296
Alternate gene names: NA
Gene position: 314643-313990 (Counterclockwise)
Preceding gene: 94309242
Following gene: 94309237
Centisome position: 8.01
GC content: 61.47
Gene sequence:
>654_bases ATGTCGACCTTTCTTTCCGGCACCGCATCCGATTCCGCTACCCTGGATGCGCTGCCGCTGTTCCCTCTGCACACGGTCCT GTTTCCAGACGGCCGTCTGCCTCTCCGTGTATTCGAGAAACGCTACGTCGACATGGTGCGCAACTGTATGCGCGACCATC TGCCGTTCGGCGTCTGTCTGATTGCCACCGGAGAGGAAGTCGCGCAGCCGGGCCAGACCACCGAACCTGAATCCATCGGC TGTCTTGCGGAGATCGTCGATTGCAACGTGGAGCAACTCGGCGTCCTGCTGATTGAAACACGCGGACGCCAACGCTTCCG GGTGCTGTCCCACGCCACGCGCGATGACGGCTTGCTCGTGGCGAACGTGGAACTGCTGCCTCCGGATGTCATCGACTGCA AGCTGGAATTGCTGGGCGAGTGCCTGGCCGCGTTGCGTCGAATCGTGACCTCGCTCCACACAGACCAGCCCGACAAGCCG AAACTGCCCTTCGGAGAGCCCTATCTCTGGGACGATCCGAGCTGGGTGGTCAACCGGCTGTGCGAGTTGTTGCCGGTGCC ACTCAAGGCCAAGCAGATGCTGATGGAGCTACCTGATGCCGGCGTGCGCATCGAGATCGTGCATCGCTACATGCGACAGC ACCACATCGTCTGA
Upstream 100 bases:
>100_bases CGGGCACATGGTAATGTGCTGGTCAGACACCGCGAGTTGGCCCCCGCTGGCTGACGCGCGGCGCCCCGCCGTTTTCCCAT GACTGGAGCCGGCCAACCGC
Downstream 100 bases:
>100_bases GCCGCTTTCTGAACGGGCAACTCAGAAAAGTCCGAGCCTCGCCTGATCTTCCAGCAGCTTGCGCACCGGGGCCGGGGTGC CCAGCATATCGAGATCGTCA
Product: Peptidase S16, lon-like protein
Products: NA
Alternate protein names: ATP-Dependent Protease La; ATP-Dependent Protease La Domain Protein; ATP-Dependent Protease La Domain-Containing Protein; Protease; ATP-Dependent Endopeptidase Lon; Peptidase S
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSTFLSGTASDSATLDALPLFPLHTVLFPDGRLPLRVFEKRYVDMVRNCMRDHLPFGVCLIATGEEVAQPGQTTEPESIG CLAEIVDCNVEQLGVLLIETRGRQRFRVLSHATRDDGLLVANVELLPPDVIDCKLELLGECLAALRRIVTSLHTDQPDKP KLPFGEPYLWDDPSWVVNRLCELLPVPLKAKQMLMELPDAGVRIEIVHRYMRQHHIV
Sequences:
>Translated_217_residues MSTFLSGTASDSATLDALPLFPLHTVLFPDGRLPLRVFEKRYVDMVRNCMRDHLPFGVCLIATGEEVAQPGQTTEPESIG CLAEIVDCNVEQLGVLLIETRGRQRFRVLSHATRDDGLLVANVELLPPDVIDCKLELLGECLAALRRIVTSLHTDQPDKP KLPFGEPYLWDDPSWVVNRLCELLPVPLKAKQMLMELPDAGVRIEIVHRYMRQHHIV >Mature_216_residues STFLSGTASDSATLDALPLFPLHTVLFPDGRLPLRVFEKRYVDMVRNCMRDHLPFGVCLIATGEEVAQPGQTTEPESIGC LAEIVDCNVEQLGVLLIETRGRQRFRVLSHATRDDGLLVANVELLPPDVIDCKLELLGECLAALRRIVTSLHTDQPDKPK LPFGEPYLWDDPSWVVNRLCELLPVPLKAKQMLMELPDAGVRIEIVHRYMRQHHIV
Specific function: Unknown
COG id: COG2802
COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24397; Mature: 24266
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFLSGTASDSATLDALPLFPLHTVLFPDGRLPLRVFEKRYVDMVRNCMRDHLPFGVCL CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE IATGEEVAQPGQTTEPESIGCLAEIVDCNVEQLGVLLIETRGRQRFRVLSHATRDDGLLV EECCHHHHCCCCCCCCHHHHHHHHHHHCCHHHHCEEEEECCCCHHHHHHHHCCCCCCEEE ANVELLPPDVIDCKLELLGECLAALRRIVTSLHTDQPDKPKLPFGEPYLWDDPSWVVNRL EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH CELLPVPLKAKQMLMELPDAGVRIEIVHRYMRQHHIV HHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure STFLSGTASDSATLDALPLFPLHTVLFPDGRLPLRVFEKRYVDMVRNCMRDHLPFGVCL CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE IATGEEVAQPGQTTEPESIGCLAEIVDCNVEQLGVLLIETRGRQRFRVLSHATRDDGLLV EECCHHHHCCCCCCCCHHHHHHHHHHHCCHHHHCEEEEECCCCHHHHHHHHCCCCCCEEE ANVELLPPDVIDCKLELLGECLAALRRIVTSLHTDQPDKPKLPFGEPYLWDDPSWVVNRL EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH CELLPVPLKAKQMLMELPDAGVRIEIVHRYMRQHHIV HHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA