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The map label for this gene is ppdD [C]

Identifier: 94309138

GI number: 94309138

Start: 202083

End: 202526

Strand: Direct

Name: ppdD [C]

Synonym: Rmet_0193

Alternate gene names: 94309138

Gene position: 202083-202526 (Clockwise)

Preceding gene: 94309137

Following gene: 335055480

Centisome position: 5.14

GC content: 61.49

Gene sequence:

>444_bases
ATGAACCGTCGACCAAAACATTCCGCGGGCTTTTCGCTTGTCGAACTCATGATCGTCGCGATAATCGTCGCGATCCTGGC
GGCTATCGCATTCCCTTCGTACATGCAGCATGTGCGCAAGTCACGTCGAACCGATGCCAAGACGGCGTTGCTCGATGCTG
CGGCAAGGCAGGAGAAGGTCTTTAGTACGCAAAACCTGTACGGTGGCGCCCCGGGCGATCTGGGCTACGCGGGCGCCGCG
TATCCGGTGCAGATTCAATCGAGCGGACAAACGTTCTATCAGCTCACCGTTGCCACAGCCAACTCGGGTACGACGTACAC
GGCCACGGCCGCGCCGGTCGGCGCGCAGGCCGGGGATGACTGCGGCTCGTATGTCATCAACAATCTGGGCGTGCAGTCCA
ACACCGGGACGTCCAACGGGGCCACGTCCGCCACCTGCTGGTAG

Upstream 100 bases:

>100_bases
TCGTGCAGCAGACGGTTGGGGGCACGGGCGTCGTTACCCAGATCAACCCCGGTGCCAATGCCACGGGATCACGCATCAAC
TGGATCAAGTTGCGCTAATC

Downstream 100 bases:

>100_bases
GCAGCAAGAGGTGCGTCGATGCGCGCGCGGGAAGTGCCGCATGTGATGGCCGGCAGGTCACTCCAAGGCCGCAGGTCCAA
GAGGCATCATCAAAATGATC

Product: putative type-4 pilus assembly protein PilE (pilE1)

Products: NA

Alternate protein names: Fimbrial Protein Pilin; Type 4 Fimbrial Biogenesis Signal Peptide Protein; Type IV Pilus Biogenesis Protein; Type IV Pilus Biogenesis Protein PilE; Pilus Assembly Protein PilE

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNRRPKHSAGFSLVELMIVAIIVAILAAIAFPSYMQHVRKSRRTDAKTALLDAAARQEKVFSTQNLYGGAPGDLGYAGAA
YPVQIQSSGQTFYQLTVATANSGTTYTATAAPVGAQAGDDCGSYVINNLGVQSNTGTSNGATSATCW

Sequences:

>Translated_147_residues
MNRRPKHSAGFSLVELMIVAIIVAILAAIAFPSYMQHVRKSRRTDAKTALLDAAARQEKVFSTQNLYGGAPGDLGYAGAA
YPVQIQSSGQTFYQLTVATANSGTTYTATAAPVGAQAGDDCGSYVINNLGVQSNTGTSNGATSATCW
>Mature_147_residues
MNRRPKHSAGFSLVELMIVAIIVAILAAIAFPSYMQHVRKSRRTDAKTALLDAAARQEKVFSTQNLYGGAPGDLGYAGAA
YPVQIQSSGQTFYQLTVATANSGTTYTATAAPVGAQAGDDCGSYVINNLGVQSNTGTSNGATSATCW

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15297; Mature: 15297

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRPKHSAGFSLVELMIVAIIVAILAAIAFPSYMQHVRKSRRTDAKTALLDAAARQEKV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FSTQNLYGGAPGDLGYAGAAYPVQIQSSGQTFYQLTVATANSGTTYTATAAPVGAQAGDD
HHHCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCH
CGSYVINNLGVQSNTGTSNGATSATCW
HHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRRPKHSAGFSLVELMIVAIIVAILAAIAFPSYMQHVRKSRRTDAKTALLDAAARQEKV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FSTQNLYGGAPGDLGYAGAAYPVQIQSSGQTFYQLTVATANSGTTYTATAAPVGAQAGDD
HHHCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCH
CGSYVINNLGVQSNTGTSNGATSATCW
HHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA