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The map label for this gene is yfgC [H]

Identifier: 94309092

GI number: 94309092

Start: 151708

End: 152562

Strand: Direct

Name: yfgC [H]

Synonym: Rmet_0147

Alternate gene names: 94309092

Gene position: 151708-152562 (Clockwise)

Preceding gene: 94309090

Following gene: 94309095

Centisome position: 3.86

GC content: 63.16

Gene sequence:

>855_bases
GTGGTTTCCGCGCCCGACGATGGCGTGCGGGTTGATCGCCGCTATTCGAAGGTGCGGGACATCGTGCCGATGGAGGTGAT
CGACCAGCAGGCGGCGCGCGAGTACGAACAGGTCAAGCAGGAAGCGATCGCCAAGCACACGCTGGTCGACGAAGACGATC
CGCAGGTGAAGCGCCTGCGCGAGATCGGCATCCGGCTGCTGCCGCAGACCGTGCTCTGGAATCCGCGCGCCGGGCGCTGG
GCCTGGGAAATCAACCTGATCCGGTCCAAGCAGGTCAACGCCTTCTGCATGCCGGGTGGCAAGATGGCCGTCTATTCCGG
CCTGCTCGATGAGCTCAATCTGACCGACGACGAAGTGGCCATGGTCATGGGCCACGAGATCTCGCACGCATTGGAAGAAC
ACGCCCGCCAGCGCGCGGCGCAGGCCGAGATCTCGAACCTGGGCGCAAACGTGGTGTCGCAACTGACCGGCTTCGGCAAC
CTTGGCAATATGGATATCGGCTCCAATGCCAAGATGCTGTCGCTGCGCTTTTCGCGTCAGGAAGAGACCGAAGCCGACCT
GATCGGCATGGATATCGCCGCGCGCGCCGGGTATGACCCCCGCGCGGCCATCACGCTTTGGCAGAAGATGGGCGCAGTGC
TCAAGGCCGGCGACGAGTTCACCTCGACCCATCCGTCCGGCCGCAGCCGGATCGCCGTGCTTCAGGCGCATATGAATGAA
GTGCTGCCGCTCTATGCCAAGGCCATGAATATGCCGATGGAAAAGCTGCCGCCTTACAAGGCCAATATGGCTGACCTGCA
CGACGCGCCGGTCGACGCGGGTGACGAGGATCTCCAGCATCCGCTGAAAAAGTAG

Upstream 100 bases:

>100_bases
ATCGTGCCGGTTGCGCCAGCAGGCCGTGGCCGCAGCCTTCGTACTGGCTGCCGCGCTGGGCGCCGCGCATCCGCTTCCCG
CGCGGGCGCAGGGAGTTGCC

Downstream 100 bases:

>100_bases
CGGCGGTGGCCCGGACGGGCGAAAAAAAACCGGCTCAGATCGAGCCGGTTTTTCTTTTGAAGCGGGCGAGACCTCAGGCA
ACGAGCCCCGTGGCTTCGTC

Product: peptidase family M48

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MVSAPDDGVRVDRRYSKVRDIVPMEVIDQQAAREYEQVKQEAIAKHTLVDEDDPQVKRLREIGIRLLPQTVLWNPRAGRW
AWEINLIRSKQVNAFCMPGGKMAVYSGLLDELNLTDDEVAMVMGHEISHALEEHARQRAAQAEISNLGANVVSQLTGFGN
LGNMDIGSNAKMLSLRFSRQEETEADLIGMDIAARAGYDPRAAITLWQKMGAVLKAGDEFTSTHPSGRSRIAVLQAHMNE
VLPLYAKAMNMPMEKLPPYKANMADLHDAPVDAGDEDLQHPLKK

Sequences:

>Translated_284_residues
MVSAPDDGVRVDRRYSKVRDIVPMEVIDQQAAREYEQVKQEAIAKHTLVDEDDPQVKRLREIGIRLLPQTVLWNPRAGRW
AWEINLIRSKQVNAFCMPGGKMAVYSGLLDELNLTDDEVAMVMGHEISHALEEHARQRAAQAEISNLGANVVSQLTGFGN
LGNMDIGSNAKMLSLRFSRQEETEADLIGMDIAARAGYDPRAAITLWQKMGAVLKAGDEFTSTHPSGRSRIAVLQAHMNE
VLPLYAKAMNMPMEKLPPYKANMADLHDAPVDAGDEDLQHPLKK
>Mature_284_residues
MVSAPDDGVRVDRRYSKVRDIVPMEVIDQQAAREYEQVKQEAIAKHTLVDEDDPQVKRLREIGIRLLPQTVLWNPRAGRW
AWEINLIRSKQVNAFCMPGGKMAVYSGLLDELNLTDDEVAMVMGHEISHALEEHARQRAAQAEISNLGANVVSQLTGFGN
LGNMDIGSNAKMLSLRFSRQEETEADLIGMDIAARAGYDPRAAITLWQKMGAVLKAGDEFTSTHPSGRSRIAVLQAHMNE
VLPLYAKAMNMPMEKLPPYKANMADLHDAPVDAGDEDLQHPLKK

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=217, Percent_Identity=29.0322580645161, Blast_Score=81, Evalue=9e-16,
Organism=Escherichia coli, GI1788840, Length=211, Percent_Identity=27.0142180094787, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87082185, Length=208, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322940, Length=171, Percent_Identity=33.9181286549708, Blast_Score=96, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 31606; Mature: 31606

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSAPDDGVRVDRRYSKVRDIVPMEVIDQQAAREYEQVKQEAIAKHTLVDEDDPQVKRLR
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EIGIRLLPQTVLWNPRAGRWAWEINLIRSKQVNAFCMPGGKMAVYSGLLDELNLTDDEVA
HHHHHHCCHHHEECCCCCCEEEEEEEEECCCCCEEECCCCHHHHHHHHHHHCCCCHHHHH
MVMGHEISHALEEHARQRAAQAEISNLGANVVSQLTGFGNLGNMDIGSNAKMLSLRFSRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC
EETEADLIGMDIAARAGYDPRAAITLWQKMGAVLKAGDEFTSTHPSGRSRIAVLQAHMNE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHH
VLPLYAKAMNMPMEKLPPYKANMADLHDAPVDAGDEDLQHPLKK
HHHHHHHHHCCCHHHCCCCCCCCHHHCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MVSAPDDGVRVDRRYSKVRDIVPMEVIDQQAAREYEQVKQEAIAKHTLVDEDDPQVKRLR
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EIGIRLLPQTVLWNPRAGRWAWEINLIRSKQVNAFCMPGGKMAVYSGLLDELNLTDDEVA
HHHHHHCCHHHEECCCCCCEEEEEEEEECCCCCEEECCCCHHHHHHHHHHHCCCCHHHHH
MVMGHEISHALEEHARQRAAQAEISNLGANVVSQLTGFGNLGNMDIGSNAKMLSLRFSRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC
EETEADLIGMDIAARAGYDPRAAITLWQKMGAVLKAGDEFTSTHPSGRSRIAVLQAHMNE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHH
VLPLYAKAMNMPMEKLPPYKANMADLHDAPVDAGDEDLQHPLKK
HHHHHHHHHCCCHHHCCCCCCCCHHHCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]