Click here to switch to the map view.

The map label for this gene is 94309086

Identifier: 94309086

GI number: 94309086

Start: 145594

End: 146598

Strand: Direct

Name: 94309086

Synonym: Rmet_0141

Alternate gene names: NA

Gene position: 145594-146598 (Clockwise)

Preceding gene: 94309085

Following gene: 94309087

Centisome position: 3.71

GC content: 67.76

Gene sequence:

>1005_bases
GTGTTCATTCGTCAGCCCACCCAGCGTCGCGGCGTAGAACGCGCTCGCCTGCATTCCTCCCACCGGCCGCGGCGCCATCT
GGTCCGCGGCGTGGCCGGCAACACGTCTGGCGACACCGTCTGGCTGTTCGATCTCGACAACACGCTGCACGATGCCTCGC
ACGCCATCTTTCCGGCGATCAACCGACTGATGACGGCCTACGTGGCGCGTGTGCTCGGCTGCGACGACGCTACGGCCAGC
CGGGTGCGCGTCGACTACTGGCAGCGCTACGGCGCCACGCTGCTCGGCATGGTCCGCCACCATCAGGTCGATCCGGCGGA
CTTCCTGCGCGCCGCGCATGATTTCCCCGAGCTGGCGGACATGGTGCGCGTGCGACGAGGTCTGGTGGCCGCACTGCGCC
AGTTGCCGGGGCGGAAGATCCTGGTCACGAACGCACCGCGCAACTACGCGCGCAGCGTGATGGCGATCGCTGGCATCGAT
CGATGTTTCGAGCGGGTCGTGGCCATCGAGGACATGTGGGTGCACGGACACCTGCGTCCGAAACCGGACCGCCGCATGAT
GCTGCGATTGCTGGCGCAGATCGGCGTGGCGCCGCACCGGGCGGTACTGGTGGAAGACACGCTGTCGCACCTCAAGCACT
ATGCGGGGTCGGGTATCCGCAGGGCCTGGGTGACCGGCTACCTGCGCACGATCGCGCCGTCACGGCCGCACGTGGTGGTG
CCGGCTCAGGACGCCAGCGTGCCCGGCGCGGCGCGTGACGCGGTCACTCGCTCGACGCTGGCTGCCGAAGACCGCCAGCG
CGTGGCGCATCTGGCGCAGGAACGGTCGGTGACGCTGGTGGCGGCCGAGAGCCAGGACCCCACCCGTGCGGCAACCACGC
CACAGTCGCAGCCCGATCATTTGCCGCGTATGCGGGCACGCGTGACGAATCGGCCCGGCTATGTGGACATAAAAGTACAA
TCGATGCATCAACTCCTACGACGAATGTGGAGAACCGGGTCATGA

Upstream 100 bases:

>100_bases
GAACAGGCCTTCGGCACGATGATCCGCTCGCACTGAGCGCGTCATAGGGGAATCCGCCGCGTGCGGGTTCCCGCCTCTTC
CTCCATTTCCAGATACCCGC

Downstream 100 bases:

>100_bases
CTCAAACCATTTCAAGCCAGGCAGAGGCGGACACGCCCGCTGGCCACTCGCCGGAAGCGGCGCCCGCGCGCAAGCGTCCG
CGCCCGGGTGAACGCCGTAT

Product: pyrimidine 5-nucleotidase

Products: NA

Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Superfamily Hydrolase; HAD Family Hydrolase; Phosphatase; Hydrolase Protein; HAD Superfamily Protein; Haloacid Dehalogenase Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; Hydrolase Of HAD Superfamily

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MFIRQPTQRRGVERARLHSSHRPRRHLVRGVAGNTSGDTVWLFDLDNTLHDASHAIFPAINRLMTAYVARVLGCDDATAS
RVRVDYWQRYGATLLGMVRHHQVDPADFLRAAHDFPELADMVRVRRGLVAALRQLPGRKILVTNAPRNYARSVMAIAGID
RCFERVVAIEDMWVHGHLRPKPDRRMMLRLLAQIGVAPHRAVLVEDTLSHLKHYAGSGIRRAWVTGYLRTIAPSRPHVVV
PAQDASVPGAARDAVTRSTLAAEDRQRVAHLAQERSVTLVAAESQDPTRAATTPQSQPDHLPRMRARVTNRPGYVDIKVQ
SMHQLLRRMWRTGS

Sequences:

>Translated_334_residues
MFIRQPTQRRGVERARLHSSHRPRRHLVRGVAGNTSGDTVWLFDLDNTLHDASHAIFPAINRLMTAYVARVLGCDDATAS
RVRVDYWQRYGATLLGMVRHHQVDPADFLRAAHDFPELADMVRVRRGLVAALRQLPGRKILVTNAPRNYARSVMAIAGID
RCFERVVAIEDMWVHGHLRPKPDRRMMLRLLAQIGVAPHRAVLVEDTLSHLKHYAGSGIRRAWVTGYLRTIAPSRPHVVV
PAQDASVPGAARDAVTRSTLAAEDRQRVAHLAQERSVTLVAAESQDPTRAATTPQSQPDHLPRMRARVTNRPGYVDIKVQ
SMHQLLRRMWRTGS
>Mature_334_residues
MFIRQPTQRRGVERARLHSSHRPRRHLVRGVAGNTSGDTVWLFDLDNTLHDASHAIFPAINRLMTAYVARVLGCDDATAS
RVRVDYWQRYGATLLGMVRHHQVDPADFLRAAHDFPELADMVRVRRGLVAALRQLPGRKILVTNAPRNYARSVMAIAGID
RCFERVVAIEDMWVHGHLRPKPDRRMMLRLLAQIGVAPHRAVLVEDTLSHLKHYAGSGIRRAWVTGYLRTIAPSRPHVVV
PAQDASVPGAARDAVTRSTLAAEDRQRVAHLAQERSVTLVAAESQDPTRAATTPQSQPDHLPRMRARVTNRPGYVDIKVQ
SMHQLLRRMWRTGS

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37636; Mature: 37636

Theoretical pI: Translated: 11.84; Mature: 11.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIRQPTQRRGVERARLHSSHRPRRHLVRGVAGNTSGDTVWLFDLDNTLHDASHAIFPAI
CCCCCCHHHHCHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHH
NRLMTAYVARVLGCDDATASRVRVDYWQRYGATLLGMVRHHQVDPADFLRAAHDFPELAD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHH
MVRVRRGLVAALRQLPGRKILVTNAPRNYARSVMAIAGIDRCFERVVAIEDMWVHGHLRP
HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
KPDRRMMLRLLAQIGVAPHRAVLVEDTLSHLKHYAGSGIRRAWVTGYLRTIAPSRPHVVV
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEE
PAQDASVPGAARDAVTRSTLAAEDRQRVAHLAQERSVTLVAAESQDPTRAATTPQSQPDH
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCH
LPRMRARVTNRPGYVDIKVQSMHQLLRRMWRTGS
HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFIRQPTQRRGVERARLHSSHRPRRHLVRGVAGNTSGDTVWLFDLDNTLHDASHAIFPAI
CCCCCCHHHHCHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHH
NRLMTAYVARVLGCDDATASRVRVDYWQRYGATLLGMVRHHQVDPADFLRAAHDFPELAD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHH
MVRVRRGLVAALRQLPGRKILVTNAPRNYARSVMAIAGIDRCFERVVAIEDMWVHGHLRP
HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
KPDRRMMLRLLAQIGVAPHRAVLVEDTLSHLKHYAGSGIRRAWVTGYLRTIAPSRPHVVV
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEE
PAQDASVPGAARDAVTRSTLAAEDRQRVAHLAQERSVTLVAAESQDPTRAATTPQSQPDH
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCH
LPRMRARVTNRPGYVDIKVQSMHQLLRRMWRTGS
HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA