| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is thrS [H]
Identifier: 335055517
GI number: 335055517
Start: 1269993
End: 1271984
Strand: Direct
Name: thrS [H]
Synonym: NA
Alternate gene names: 335055517
Gene position: 1269993-1271984 (Clockwise)
Preceding gene: 94310104
Following gene: 94310106
Centisome position: 32.33
GC content: 60.64
Gene sequence:
>1992_bases ATGGGCCGGCGCCACAAAAGAAGCTATGCTCCGCTCGCCACATCGCCTGAAGGCCGGTGCAGCGGAATCCTCGAGAGGTG CAAGATGATCGTAATCACGCTGCCAGACGGTTCCCGTCGTGAGTATCCCGGCCCCGTCACGGTGGCCGAAGTGGCGCAGA GCATTGGCTCCGGACTGGCCAAAGCAGCGCTCGCCGGCAAGGTCGATGGTCGCATGGTCGATACGAGCTTCAGGATCGAC CAGGATGCGTCGCTGTCCATCGTCACGGACAAGGATGCAGATGGCGTCGACGTGATTCGTCACTCGACGGCTCACTTGCT GGCCTACGCTGTCAAGGAGCTGTATCCCGACGCGCAGGTCACGATCGGTCCGGTCATTGACAACGGCTTCTACTACGACT TCTCGTACAAGCGTCCCTTCACGCCGGAAGACCTTGCCGCCATCGAAAAGAAGATGACGGAACTCGCCCGCAAGGACGAG AAGGTGTCGCGCGAGGTATGGAATCGCGATGAGGCGGTGGCCCTGTTCGAGTCGATGGGCGAGAAGTACAAGGCCGAGAT CATTGCGTCGATTCCCGCGGATCAGGAGATCGGCCTCTATCGCGAAGGCAGCTTCGTCGACCTGTGCCGTGGCCCGCACG TACCGTCCACGGGAAAGCTCAAGGTCTTCAAGCTGATGAAGGTGGCCGGTGCCTACTGGCGCGGCGACTCGAACAACGAG ATGCTCCAGCGTATCTACGGTACGGCCTGGGCGAAGAAGGAAGACCAGGACGCCTACCTGCATATGCTGGAGGAGGCTGA GAAGCGCGATCACCGCCGCCTGGGCAAGACACTTGACCTGTTCCATCTGCAGGAAGAGGCGCCTGGCATGGTGTTCTGGC ACCCGAAGGGCTGGCAGGTGTGGCAGGCCGTCGAGCAATACATGCGCGGCCGTCTGGGTCAGGCCGGCTATGAGGAAGTG CGCACGCCGCAGGTGATGGATCGTTCGCTCTGGGAGCGTTCCGGCCACTGGGACAACTATAAAGAGAACATGTTTGTCAC GGAGTCGGAGAAGCGCGATTACGCGATCAAGCCGATGAACTGCCCGGGCCATGTGCAGATCTTCAACCACGGCCTGCGCT CGTACCGCGACCTGCCGCTGCGTCTTGCCGAATTCGGTGCGTGCCATCGCAACGAGCCCTCGGGAGCGTTGCACGGGCTG ATGCGTGTGCGAGGTTTTGTGCAGGATGATGCGCATATTTTCTGCACGGAAGAGCAGATCGTCGAGGAGGCCAAGGCCTT CAACGAACTCGCGTTCTCGATCTATGACGACTTTGGCTTCAAGGATGTCGCGGTGAAGCTGTCGCTGCGCCCGGAAAAGC GCGCGGGTTCGGACGCGGTCTGGGATCACGCCGAGGATGGCCTGCGCCTGGCGCTGCGTGCCTGTGGCGTGGAGTGGGAG GAGCTGCCGGGCGAGGGTGCTTTCTACGGCCCGAAGGTCGAGTACCACATCAAGGATGCAATCGGCCGCTCGTGGCAGTG CGGCACGCTGCAGCTCGATCTGGTGCTGCCGGAGCGCCTGGGCGCCGAGTACGTCTCCGAGGATAATTCCCGGAAGCGAC CGGTCATGCTGCACCGCGCGATCCTTGGTTCGTTCGAGCGCTTCCTGGGTATCTTGCTGGAAAACCACGCGGGTGCGCTG CCGGCCTGGCTGGCTCCAGAGCAGGTGGTGGTGATGAATATCGCCGAATCCCAGTCGGAATATGCTGAAAACGTTGTGCA ACTCTTGCAAAAACAAGGGTTTAGGGCCAAGGCGGATTTGCGTAACGAGAAAATTACGTATAAAATTCGCGAGCATTCCC TCCAGAAGATCCCTTACCTGCTGGTAATTGGCGACAAGGAGCGGGATGCCAATCAAGTGGCCGTGCGTGCCCGTGGCAAC GTGGATCTGGGTGTCATGCCTGTTTCCGCGTTTGTGGAGCGTCTGCAACAGGACGTTTCCAGCAAAGCCTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 663; Mature: 662
Protein sequence:
NA
Sequences:
>Translated_663_residues MGRRHKRSYAPLATSPEGRCSGILERCKMIVITLPDGSRREYPGPVTVAEVAQSIGSGLAKAALAGKVDGRMVDTSFRID QDASLSIVTDKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYKRPFTPEDLAAIEKKMTELARKDE KVSREVWNRDEAVALFESMGEKYKAEIIASIPADQEIGLYREGSFVDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSNNE MLQRIYGTAWAKKEDQDAYLHMLEEAEKRDHRRLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLGQAGYEEV RTPQVMDRSLWERSGHWDNYKENMFVTESEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSGALHGL MRVRGFVQDDAHIFCTEEQIVEEAKAFNELAFSIYDDFGFKDVAVKLSLRPEKRAGSDAVWDHAEDGLRLALRACGVEWE ELPGEGAFYGPKVEYHIKDAIGRSWQCGTLQLDLVLPERLGAEYVSEDNSRKRPVMLHRAILGSFERFLGILLENHAGAL PAWLAPEQVVVMNIAESQSEYAENVVQLLQKQGFRAKADLRNEKITYKIREHSLQKIPYLLVIGDKERDANQVAVRARGN VDLGVMPVSAFVERLQQDVSSKA >Mature_662_residues GRRHKRSYAPLATSPEGRCSGILERCKMIVITLPDGSRREYPGPVTVAEVAQSIGSGLAKAALAGKVDGRMVDTSFRIDQ DASLSIVTDKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYKRPFTPEDLAAIEKKMTELARKDEK VSREVWNRDEAVALFESMGEKYKAEIIASIPADQEIGLYREGSFVDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSNNEM LQRIYGTAWAKKEDQDAYLHMLEEAEKRDHRRLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLGQAGYEEVR TPQVMDRSLWERSGHWDNYKENMFVTESEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSGALHGLM RVRGFVQDDAHIFCTEEQIVEEAKAFNELAFSIYDDFGFKDVAVKLSLRPEKRAGSDAVWDHAEDGLRLALRACGVEWEE LPGEGAFYGPKVEYHIKDAIGRSWQCGTLQLDLVLPERLGAEYVSEDNSRKRPVMLHRAILGSFERFLGILLENHAGALP AWLAPEQVVVMNIAESQSEYAENVVQLLQKQGFRAKADLRNEKITYKIREHSLQKIPYLLVIGDKERDANQVAVRARGNV DLGVMPVSAFVERLQQDVSSKA
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38202255, Length=634, Percent_Identity=40.8517350157729, Blast_Score=484, Evalue=1e-136, Organism=Homo sapiens, GI38570111, Length=615, Percent_Identity=40.4878048780488, Blast_Score=473, Evalue=1e-133, Organism=Homo sapiens, GI20070344, Length=649, Percent_Identity=37.1340523882897, Blast_Score=411, Evalue=1e-114, Organism=Escherichia coli, GI1788013, Length=636, Percent_Identity=59.1194968553459, Blast_Score=796, Evalue=0.0, Organism=Escherichia coli, GI1786392, Length=163, Percent_Identity=30.6748466257669, Blast_Score=72, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71984184, Length=634, Percent_Identity=39.1167192429022, Blast_Score=471, Evalue=1e-133, Organism=Caenorhabditis elegans, GI71984192, Length=634, Percent_Identity=39.1167192429022, Blast_Score=470, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6322112, Length=628, Percent_Identity=40.2866242038217, Blast_Score=468, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6322654, Length=394, Percent_Identity=37.5634517766497, Blast_Score=291, Evalue=2e-79, Organism=Drosophila melanogaster, GI24583842, Length=631, Percent_Identity=39.4611727416799, Blast_Score=488, Evalue=1e-138, Organism=Drosophila melanogaster, GI28574141, Length=631, Percent_Identity=39.4611727416799, Blast_Score=488, Evalue=1e-138, Organism=Drosophila melanogaster, GI24583839, Length=631, Percent_Identity=39.4611727416799, Blast_Score=488, Evalue=1e-138,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR012675 - InterPro: IPR004095 - InterPro: IPR012676 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF02824 TGS; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 75035; Mature: 74904
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRRHKRSYAPLATSPEGRCSGILERCKMIVITLPDGSRREYPGPVTVAEVAQSIGSGLA CCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH KAALAGKVDGRMVDTSFRIDQDASLSIVTDKDADGVDVIRHSTAHLLAYAVKELYPDAQV HHHHHCCCCCEEEECEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE TIGPVIDNGFYYDFSYKRPFTPEDLAAIEKKMTELARKDEKVSREVWNRDEAVALFESMG EEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC EKYKAEIIASIPADQEIGLYREGSFVDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSNNE HHHHHHHEEECCCCCCCCEEECCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH MLQRIYGTAWAKKEDQDAYLHMLEEAEKRDHRRLGKTLDLFHLQEEAPGMVFWHPKGWQV HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCCEEEECCCCCHH WQAVEQYMRGRLGQAGYEEVRTPQVMDRSLWERSGHWDNYKENMFVTESEKRDYAIKPMN HHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEECCCC CPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQI CCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHH VEEAKAFNELAFSIYDDFGFKDVAVKLSLRPEKRAGSDAVWDHAEDGLRLALRACGVEWE HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHCCCHH ELPGEGAFYGPKVEYHIKDAIGRSWQCGTLQLDLVLPERLGAEYVSEDNSRKRPVMLHRA HCCCCCCCCCCEEEEEEHHHCCCCCCCCEEEEEEECHHHHCHHHHCCCCCCCCHHHHHHH ILGSFERFLGILLENHAGALPAWLAPEQVVVMNIAESQSEYAENVVQLLQKQGFRAKADL HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHCC RNEKITYKIREHSLQKIPYLLVIGDKERDANQVAVRARGNVDLGVMPVSAFVERLQQDVS CCCEEEEEEHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHH SKA CCC >Mature Secondary Structure GRRHKRSYAPLATSPEGRCSGILERCKMIVITLPDGSRREYPGPVTVAEVAQSIGSGLA CCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH KAALAGKVDGRMVDTSFRIDQDASLSIVTDKDADGVDVIRHSTAHLLAYAVKELYPDAQV HHHHHCCCCCEEEECEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE TIGPVIDNGFYYDFSYKRPFTPEDLAAIEKKMTELARKDEKVSREVWNRDEAVALFESMG EEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC EKYKAEIIASIPADQEIGLYREGSFVDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSNNE HHHHHHHEEECCCCCCCCEEECCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH MLQRIYGTAWAKKEDQDAYLHMLEEAEKRDHRRLGKTLDLFHLQEEAPGMVFWHPKGWQV HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCCEEEECCCCCHH WQAVEQYMRGRLGQAGYEEVRTPQVMDRSLWERSGHWDNYKENMFVTESEKRDYAIKPMN HHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEECCCC CPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQI CCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHH VEEAKAFNELAFSIYDDFGFKDVAVKLSLRPEKRAGSDAVWDHAEDGLRLALRACGVEWE HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHCCCHH ELPGEGAFYGPKVEYHIKDAIGRSWQCGTLQLDLVLPERLGAEYVSEDNSRKRPVMLHRA HCCCCCCCCCCEEEEEEHHHCCCCCCCCEEEEEEECHHHHCHHHHCCCCCCCCHHHHHHH ILGSFERFLGILLENHAGALPAWLAPEQVVVMNIAESQSEYAENVVQLLQKQGFRAKADL HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHCC RNEKITYKIREHSLQKIPYLLVIGDKERDANQVAVRARGNVDLGVMPVSAFVERLQQDVS CCCEEEEEEHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHH SKA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA