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The map label for this gene is infC [H]

Identifier: 93007242

GI number: 93007242

Start: 2988687

End: 2989190

Strand: Direct

Name: infC [H]

Synonym: Pcryo_2418

Alternate gene names: 93007242

Gene position: 2988687-2989190 (Clockwise)

Preceding gene: 93007241

Following gene: 93007243

Centisome position: 97.67

GC content: 42.26

Gene sequence:

>504_bases
TTGAACATTAATGAAGATATCAGTGCCAAAGAAGTCCGTCTGGTCAAAGAAGACGGTGAACAAATGGGCGTGGTCGATAT
CGACACCGCGATGAAAGCGGCACGTGAAGACAGTCTAGATTTGGTAGAGCTGGTTCCCGAAGCCAAACCGCCAGTATGTA
AAATCATGGATTATAAACATTTCCTCTATGATCAGAAGCAAAAGGCGAAAGAAGCTAAAAAGAACCAAAAGCAGACTCAA
CTAAAAGAGATGAAGCTACGTCCTAGCACTGAAGAAGCCGATTATCAGGTTAAACTGAGAAAAATCGTTAGCTTCTTAGA
AGATCAGGATAAAGTTAAAATTAGCATCCGTTTCCGCGGACGTGAAATGGCCCACCAAGAAATTGGTCGCAAGCAACTTG
ATCGTATCATTGAAGATACGGCTGATATCTCAAACGTCGAACAGTATCCTAAGATGGAAGGTCGTCAAATGGGTATGCTG
TTAGGACCTACTAAGAAGAAATAG

Upstream 100 bases:

>100_bases
TCGCTGAATTTATCACATTAGTAGAAGCAGCTGTTGCCGAAAAGGGCCGACAGATCCCAAAAATAGATCAGGAGTAATAC
CTATTAAACAGTCAAACCGT

Downstream 100 bases:

>100_bases
ACTTTTTAATCTTCTATTCTTAGTAGTGGCTGTGTTTATATAGATATTCATGATTTCCCACCACCAATATGCTGCGGCAT
ATTGGTGGTTTTTAGTATGT

Product: translation initiation factor IF-3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MNINEDISAKEVRLVKEDGEQMGVVDIDTAMKAAREDSLDLVELVPEAKPPVCKIMDYKHFLYDQKQKAKEAKKNQKQTQ
LKEMKLRPSTEEADYQVKLRKIVSFLEDQDKVKISIRFRGREMAHQEIGRKQLDRIIEDTADISNVEQYPKMEGRQMGML
LGPTKKK

Sequences:

>Translated_167_residues
MNINEDISAKEVRLVKEDGEQMGVVDIDTAMKAAREDSLDLVELVPEAKPPVCKIMDYKHFLYDQKQKAKEAKKNQKQTQ
LKEMKLRPSTEEADYQVKLRKIVSFLEDQDKVKISIRFRGREMAHQEIGRKQLDRIIEDTADISNVEQYPKMEGRQMGML
LGPTKKK
>Mature_167_residues
MNINEDISAKEVRLVKEDGEQMGVVDIDTAMKAAREDSLDLVELVPEAKPPVCKIMDYKHFLYDQKQKAKEAKKNQKQTQ
LKEMKLRPSTEEADYQVKLRKIVSFLEDQDKVKISIRFRGREMAHQEIGRKQLDRIIEDTADISNVEQYPKMEGRQMGML
LGPTKKK

Specific function: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins [H]

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=166, Percent_Identity=54.2168674698795, Blast_Score=174, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 19395; Mature: 19395

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINEDISAKEVRLVKEDGEQMGVVDIDTAMKAAREDSLDLVELVPEAKPPVCKIMDYKH
CCCCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHH
FLYDQKQKAKEAKKNQKQTQLKEMKLRPSTEEADYQVKLRKIVSFLEDQDKVKISIRFRG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECC
REMAHQEIGRKQLDRIIEDTADISNVEQYPKMEGRQMGMLLGPTKKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MNINEDISAKEVRLVKEDGEQMGVVDIDTAMKAAREDSLDLVELVPEAKPPVCKIMDYKH
CCCCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHH
FLYDQKQKAKEAKKNQKQTQLKEMKLRPSTEEADYQVKLRKIVSFLEDQDKVKISIRFRG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECC
REMAHQEIGRKQLDRIIEDTADISNVEQYPKMEGRQMGMLLGPTKKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA