| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is cls [H]
Identifier: 93007197
GI number: 93007197
Start: 2916935
End: 2918374
Strand: Direct
Name: cls [H]
Synonym: Pcryo_2373
Alternate gene names: 93007197
Gene position: 2916935-2918374 (Clockwise)
Preceding gene: 93007196
Following gene: 93007205
Centisome position: 95.33
GC content: 43.75
Gene sequence:
>1440_bases ATGATCGTAGATATTTTGTTGACGATACATTTTATCCTACTGATACTGATTTCTTTACGGGTCTTATCTCGTCATGATTT GACCTCGCCCGCTAGATTAGCATGGATTGTCATTCTGTTTATTTTACCTTATTTTGGCGTGCTGATTTACTGGATGTTTG GTGAAGTGCATTTGGGTCATGACTTTGGGCAAAAACGCGACGATATCATTAAGCGATTAAATACTCATAGTCCAAGCGTT CTTGGTCATGAGACGACGTTAGAGAAGATGATCAAGCCCGCTTATCAAGCTTCCTTTGCTTATGCAGCAAAAGCCACCGG TTTTCATACTATGGAGGGTAATCAGGCAGAGCTCATGGCAGATGCAAGCGAAACACGCAGACGCATGATTGCTGATTTTG ATGCTGCAACAGACCATATCCATGTGCTGTATTACATTTGGCTCGTCGATGGCATGGGTATTGATACCGCGCAAGCTCTC ATCCGAGCAGCAAAGCGCGGCGTTACTTGTCGAGCAATGGTTGATGGCATGGGCTCACGGAAGATGGTGAGCTCAAAGAT ATGGCAAGAAATGCAAGATGCTGGCGTACAAGTCAGTGTAGCTCTCCCACTAACCAACTTTGTAAAAGTAATGCTGTTTA GCCGTATTGATCTGCGTAATCACCGCAAAATTACCGTTATTGATGGCAAAATTGGCTACTCTGGTAGTCGTAACTGCGCC GATCCTGAATTTATGGTAAAGCCAAAATATGCGCCGTGGGTCGATATTATGCTGCGTATCGAAGGACCTGTGGTCGCGCA GAATCAGATGTTATTTGCTAGTGATTGGCTGATTGAAAACCCAGATACTTCGCTTGATAGCTTTTATTATGATAGCACGC CAAAGCCTAATGGCTTTCCTGCCCAAGTTTTTTCAGATGGTCCTACTCAGCGGCACGGTACCACGCCACAGTTTTTGGGT GCTTTGATTAGCCAAGCGCAAGAGACGCTGATTATCTCTACGCCTTATTTCGTGCCCGATTATTCACTCGTCAGTATTTT ATGCGCTACTGCCTATCGCGGGGTTGAAGTGACGATGGTTTTTCCAAAAAATAACGATTCCTTTATCGTTGCCGCGACCA GTCGCAGTTATTATTGGCAATTGCTCGAAGCGGGGGTAAAAATTTATGAATATAAACCAGGCTTGTTACACGCGAAGACC TTGACGATTGATGGTGAAATTAGCTTGATTGGCTCGACCAATTTAGACTTACGTAGCTTTGATCTGAATTATGAGAATAA CATTGTTTTTAGCGATAAAAAGCTGACGGCGGATATTATTGAGCGCCAATACCAATATATCGCTGACTCAGACGAAGTAA CACGTGAAGAGGTCAAAAACTGGCCACTATCTTCTAGGATTTGGAACAACATCATTGCTACGATGGGTCCTGTTTTATAA
Upstream 100 bases:
>100_bases GCTTTTTGGAGAATACTAGACGGTTTTCATAGTACTTCTCTTTTTGATTAGTTAAAGCGATTGATACTTTTTAGATAAAA TAATAATAAGGGACGCTGTT
Downstream 100 bases:
>100_bases GCCTCTTACTTTAAGCCCATCAGGTTATTTTGTGAAGTGTCTTGATAAGATGACATAGCGATAAGTAAACTTATAAGTTC GTTGTTTTCTGCAAAATATA
Product: phospholipase D/transphosphatidylase
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MIVDILLTIHFILLILISLRVLSRHDLTSPARLAWIVILFILPYFGVLIYWMFGEVHLGHDFGQKRDDIIKRLNTHSPSV LGHETTLEKMIKPAYQASFAYAAKATGFHTMEGNQAELMADASETRRRMIADFDAATDHIHVLYYIWLVDGMGIDTAQAL IRAAKRGVTCRAMVDGMGSRKMVSSKIWQEMQDAGVQVSVALPLTNFVKVMLFSRIDLRNHRKITVIDGKIGYSGSRNCA DPEFMVKPKYAPWVDIMLRIEGPVVAQNQMLFASDWLIENPDTSLDSFYYDSTPKPNGFPAQVFSDGPTQRHGTTPQFLG ALISQAQETLIISTPYFVPDYSLVSILCATAYRGVEVTMVFPKNNDSFIVAATSRSYYWQLLEAGVKIYEYKPGLLHAKT LTIDGEISLIGSTNLDLRSFDLNYENNIVFSDKKLTADIIERQYQYIADSDEVTREEVKNWPLSSRIWNNIIATMGPVL
Sequences:
>Translated_479_residues MIVDILLTIHFILLILISLRVLSRHDLTSPARLAWIVILFILPYFGVLIYWMFGEVHLGHDFGQKRDDIIKRLNTHSPSV LGHETTLEKMIKPAYQASFAYAAKATGFHTMEGNQAELMADASETRRRMIADFDAATDHIHVLYYIWLVDGMGIDTAQAL IRAAKRGVTCRAMVDGMGSRKMVSSKIWQEMQDAGVQVSVALPLTNFVKVMLFSRIDLRNHRKITVIDGKIGYSGSRNCA DPEFMVKPKYAPWVDIMLRIEGPVVAQNQMLFASDWLIENPDTSLDSFYYDSTPKPNGFPAQVFSDGPTQRHGTTPQFLG ALISQAQETLIISTPYFVPDYSLVSILCATAYRGVEVTMVFPKNNDSFIVAATSRSYYWQLLEAGVKIYEYKPGLLHAKT LTIDGEISLIGSTNLDLRSFDLNYENNIVFSDKKLTADIIERQYQYIADSDEVTREEVKNWPLSSRIWNNIIATMGPVL >Mature_479_residues MIVDILLTIHFILLILISLRVLSRHDLTSPARLAWIVILFILPYFGVLIYWMFGEVHLGHDFGQKRDDIIKRLNTHSPSV LGHETTLEKMIKPAYQASFAYAAKATGFHTMEGNQAELMADASETRRRMIADFDAATDHIHVLYYIWLVDGMGIDTAQAL IRAAKRGVTCRAMVDGMGSRKMVSSKIWQEMQDAGVQVSVALPLTNFVKVMLFSRIDLRNHRKITVIDGKIGYSGSRNCA DPEFMVKPKYAPWVDIMLRIEGPVVAQNQMLFASDWLIENPDTSLDSFYYDSTPKPNGFPAQVFSDGPTQRHGTTPQFLG ALISQAQETLIISTPYFVPDYSLVSILCATAYRGVEVTMVFPKNNDSFIVAATSRSYYWQLLEAGVKIYEYKPGLLHAKT LTIDGEISLIGSTNLDLRSFDLNYENNIVFSDKKLTADIIERQYQYIADSDEVTREEVKNWPLSSRIWNNIIATMGPVL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=486, Percent_Identity=33.5390946502058, Blast_Score=276, Evalue=3e-75, Organism=Escherichia coli, GI1787007, Length=376, Percent_Identity=28.1914893617021, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI87081826, Length=403, Percent_Identity=27.2952853598015, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 54074; Mature: 54074
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVDILLTIHFILLILISLRVLSRHDLTSPARLAWIVILFILPYFGVLIYWMFGEVHLGH CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC DFGQKRDDIIKRLNTHSPSVLGHETTLEKMIKPAYQASFAYAAKATGFHTMEGNQAELMA CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHEEE DASETRRRMIADFDAATDHIHVLYYIWLVDGMGIDTAQALIRAAKRGVTCRAMVDGMGSR CHHHHHHHHHHHCCCCCCHHEEEEEEEHHCCCCCHHHHHHHHHHHCCCEEEHHHCCCCCH KMVSSKIWQEMQDAGVQVSVALPLTNFVKVMLFSRIDLRNHRKITVIDGKIGYSGSRNCA HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC DPEFMVKPKYAPWVDIMLRIEGPVVAQNQMLFASDWLIENPDTSLDSFYYDSTPKPNGFP CCCEEECCCCCCCEEEEEEECCCEEECCCEEEEECCEECCCCCCHHHEEECCCCCCCCCC AQVFSDGPTQRHGTTPQFLGALISQAQETLIISTPYFVPDYSLVSILCATAYRGVEVTMV CHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEE FPKNNDSFIVAATSRSYYWQLLEAGVKIYEYKPGLLHAKTLTIDGEISLIGSTNLDLRSF EECCCCCEEEEECCCHHHHHHHHCCCEEEEECCCEEEEEEEEECCEEEEEECCCCEEEEE DLNYENNIVFSDKKLTADIIERQYQYIADSDEVTREEVKNWPLSSRIWNNIIATMGPVL ECCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MIVDILLTIHFILLILISLRVLSRHDLTSPARLAWIVILFILPYFGVLIYWMFGEVHLGH CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC DFGQKRDDIIKRLNTHSPSVLGHETTLEKMIKPAYQASFAYAAKATGFHTMEGNQAELMA CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHEEE DASETRRRMIADFDAATDHIHVLYYIWLVDGMGIDTAQALIRAAKRGVTCRAMVDGMGSR CHHHHHHHHHHHCCCCCCHHEEEEEEEHHCCCCCHHHHHHHHHHHCCCEEEHHHCCCCCH KMVSSKIWQEMQDAGVQVSVALPLTNFVKVMLFSRIDLRNHRKITVIDGKIGYSGSRNCA HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC DPEFMVKPKYAPWVDIMLRIEGPVVAQNQMLFASDWLIENPDTSLDSFYYDSTPKPNGFP CCCEEECCCCCCCEEEEEEECCCEEECCCEEEEECCEECCCCCCHHHEEECCCCCCCCCC AQVFSDGPTQRHGTTPQFLGALISQAQETLIISTPYFVPDYSLVSILCATAYRGVEVTMV CHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEE FPKNNDSFIVAATSRSYYWQLLEAGVKIYEYKPGLLHAKTLTIDGEISLIGSTNLDLRSF EECCCCCEEEEECCCHHHHHHHHCCCEEEEECCCEEEEEEEEECCEEEEEECCCCEEEEE DLNYENNIVFSDKKLTADIIERQYQYIADSDEVTREEVKNWPLSSRIWNNIIATMGPVL ECCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA