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The map label for this gene is yqaJ [H]

Identifier: 93007180

GI number: 93007180

Start: 2887731

End: 2888837

Strand: Direct

Name: yqaJ [H]

Synonym: Pcryo_2356

Alternate gene names: 93007180

Gene position: 2887731-2888837 (Clockwise)

Preceding gene: 93007179

Following gene: 93007181

Centisome position: 94.37

GC content: 46.7

Gene sequence:

>1107_bases
ATGAACACAATCGCATTGAACCATATCGCTCAGCTCAGACAAACCAAGCGTACAACCGTTAAGGTGAAAGCGCCTATGGC
GACCAAAGCCAATATAGATACTGAAACAGTAAAGCCGTCTACCAATCAATCAACCACCGCAAAACGTCTGGTCAATACCA
AAACCCTCAGTCATGAGGACTGGCTTGAGGTACGTAAGCAAGGTATTGGTAGCTCTGACGCTGCCGCAGCTTGTGGAATA
CACCCTTACTTATCGATGCTTGAGCTGTGGATGATTAAGACCGGTCGTTTGCATTCACACTTGGATGACGATATTGATGG
CTACTCACCATTGTACTGGGGCAATACACTAGAGCCGATGGTGGCTAAATATTATCAACAGCACACAGGCAACAAGGTTC
GCCGTGTGAATGCCATCTTGCAGCATCCTGATCCTGACAATCACTTTATGCTGGCAAACTTAGACTACGCGATAACAGGA
AATGAGAAGGTGCAGATTCTAGAGTGTAAAACCGCAGGGGAACATGGTGCCAAGCTGTGGAAGCATGGCGTACCGTTGTA
TGTGACGTGCCAAGTGCAGCATCAATTAGCAGTCACGGGTAAGCAAGCTGCACATATCTGCGTGCTGCTATGTGGTCATG
AAGCAAAGATTTATAAAGTTGAGCGTGACGAGCGCTTGATTGCCTCCATCATTGAGCATGAGCGGTTATTTTGGCAATAT
GTGGAAACCGACACTCCACCAACGCCTGATCATAGTGAGTCAGCAGCGAGAGCCTTAAAACAACTTTATCCAACCCCTGA
GCCGTCAAGCAAAGTTGATCTGCGAGAAGATGACGGAGCCAATAAGTTGTTTGAGCAATTGCTGAGCTACCGTGACTATA
TGCAAGAGTTAGAGCAGCGTCATGACCAAGTGAAGCACCAGCTGCAAAGCTTAATTCAAGATAATGAGATTGCGGTATTC
GAGAAAGGCGCTATATCTTGGAAGCGCTCTAAGGACAGCATTAGCCTCGATAGCAAGGCACTAACCAAAGCGCATCCTGA
GTTGCTCGAGCAATTTAGTAAAACTCGTCAAGGCAGTCGTCGCTTTGTAATCCTTAACGATAACTAA

Upstream 100 bases:

>100_bases
TCGATGCTTAAAATATGACAACACAACCAACCACGCCTTTGAGCGTGGTTTTTTTATACCGTTTATTTAACCAATAATAA
ATCTAACGAAGGAGTTCATC

Downstream 100 bases:

>100_bases
GCCAATAATTCGTTATCAACCATAATCCGTAAATTAATCCACTCAATCAAATAAGCGCATAAACGCCCACCCGTTATAGG
TGGGCTTTTTTATGGCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MNTIALNHIAQLRQTKRTTVKVKAPMATKANIDTETVKPSTNQSTTAKRLVNTKTLSHEDWLEVRKQGIGSSDAAAACGI
HPYLSMLELWMIKTGRLHSHLDDDIDGYSPLYWGNTLEPMVAKYYQQHTGNKVRRVNAILQHPDPDNHFMLANLDYAITG
NEKVQILECKTAGEHGAKLWKHGVPLYVTCQVQHQLAVTGKQAAHICVLLCGHEAKIYKVERDERLIASIIEHERLFWQY
VETDTPPTPDHSESAARALKQLYPTPEPSSKVDLREDDGANKLFEQLLSYRDYMQELEQRHDQVKHQLQSLIQDNEIAVF
EKGAISWKRSKDSISLDSKALTKAHPELLEQFSKTRQGSRRFVILNDN

Sequences:

>Translated_368_residues
MNTIALNHIAQLRQTKRTTVKVKAPMATKANIDTETVKPSTNQSTTAKRLVNTKTLSHEDWLEVRKQGIGSSDAAAACGI
HPYLSMLELWMIKTGRLHSHLDDDIDGYSPLYWGNTLEPMVAKYYQQHTGNKVRRVNAILQHPDPDNHFMLANLDYAITG
NEKVQILECKTAGEHGAKLWKHGVPLYVTCQVQHQLAVTGKQAAHICVLLCGHEAKIYKVERDERLIASIIEHERLFWQY
VETDTPPTPDHSESAARALKQLYPTPEPSSKVDLREDDGANKLFEQLLSYRDYMQELEQRHDQVKHQLQSLIQDNEIAVF
EKGAISWKRSKDSISLDSKALTKAHPELLEQFSKTRQGSRRFVILNDN
>Mature_368_residues
MNTIALNHIAQLRQTKRTTVKVKAPMATKANIDTETVKPSTNQSTTAKRLVNTKTLSHEDWLEVRKQGIGSSDAAAACGI
HPYLSMLELWMIKTGRLHSHLDDDIDGYSPLYWGNTLEPMVAKYYQQHTGNKVRRVNAILQHPDPDNHFMLANLDYAITG
NEKVQILECKTAGEHGAKLWKHGVPLYVTCQVQHQLAVTGKQAAHICVLLCGHEAKIYKVERDERLIASIIEHERLFWQY
VETDTPPTPDHSESAARALKQLYPTPEPSSKVDLREDDGANKLFEQLLSYRDYMQELEQRHDQVKHQLQSLIQDNEIAVF
EKGAISWKRSKDSISLDSKALTKAHPELLEQFSKTRQGSRRFVILNDN

Specific function: Unknown

COG id: COG5377

COG function: function code L; Phage-related protein, predicted endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011604
- InterPro:   IPR017482
- InterPro:   IPR011335
- InterPro:   IPR019080 [H]

Pfam domain/function: PF09588 YqaJ [H]

EC number: NA

Molecular weight: Translated: 41876; Mature: 41876

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIALNHIAQLRQTKRTTVKVKAPMATKANIDTETVKPSTNQSTTAKRLVNTKTLSHED
CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH
WLEVRKQGIGSSDAAAACGIHPYLSMLELWMIKTGRLHSHLDDDIDGYSPLYWGNTLEPM
HHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHH
VAKYYQQHTGNKVRRVNAILQHPDPDNHFMLANLDYAITGNEKVQILECKTAGEHGAKLW
HHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECEEEEECCCEEEEEEECCCCHHHHHHH
KHGVPLYVTCQVQHQLAVTGKQAAHICVLLCGHEAKIYKVERDERLIASIIEHERLFWQY
HCCCCEEEEEEEEEEEEECCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHH
VETDTPPTPDHSESAARALKQLYPTPEPSSKVDLREDDGANKLFEQLLSYRDYMQELEQR
HHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
HDQVKHQLQSLIQDNEIAVFEKGAISWKRSKDSISLDSKALTKAHPELLEQFSKTRQGSR
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCC
RFVILNDN
EEEEEECC
>Mature Secondary Structure
MNTIALNHIAQLRQTKRTTVKVKAPMATKANIDTETVKPSTNQSTTAKRLVNTKTLSHED
CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH
WLEVRKQGIGSSDAAAACGIHPYLSMLELWMIKTGRLHSHLDDDIDGYSPLYWGNTLEPM
HHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHH
VAKYYQQHTGNKVRRVNAILQHPDPDNHFMLANLDYAITGNEKVQILECKTAGEHGAKLW
HHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECEEEEECCCEEEEEEECCCCHHHHHHH
KHGVPLYVTCQVQHQLAVTGKQAAHICVLLCGHEAKIYKVERDERLIASIIEHERLFWQY
HCCCCEEEEEEEEEEEEECCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHH
VETDTPPTPDHSESAARALKQLYPTPEPSSKVDLREDDGANKLFEQLLSYRDYMQELEQR
HHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
HDQVKHQLQSLIQDNEIAVFEKGAISWKRSKDSISLDSKALTKAHPELLEQFSKTRQGSR
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCC
RFVILNDN
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]