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The map label for this gene is 93007086

Identifier: 93007086

GI number: 93007086

Start: 2780069

End: 2780788

Strand: Reverse

Name: 93007086

Synonym: Pcryo_2262

Alternate gene names: NA

Gene position: 2780788-2780069 (Counterclockwise)

Preceding gene: 93007089

Following gene: 93007085

Centisome position: 90.88

GC content: 42.22

Gene sequence:

>720_bases
ATGAAGAATCTTATGACCAAAACCTCACCGAATAATCCTATCCATCCACAAAAAGCTGCTAACGACTTTGTGTGGACACA
GAAATTAAAGACCGATAGCGCAAATATCGAAACCCATCCTTTTGGTCCTGTCCTACCACCTGATGCCACCGTCATGATGA
TGGGCAGTTTTCCGCCCACTGCCGATAAATGGGCAATGAGGTTCCATTATCCCAATTTTCAAAATGACATGTGGCGCATT
TATGGACGCGTATTTTTTGATGATGCGGATTATTTTAGAGTAGGGGACGAAAAACGCTTTGATCCTGAGCGCATTAGAGC
CTTTATGTTTGAGCGTGGTATTGCCTCTTGTCCCACGGTAGTACAAGCGATTCGCGAAACTGGCAATGCGTCTGATAAAG
ACCTTACGGTCGTGACCACTGTCGATCTAGACACAATTTTGCCGCAAGTACCGAAAGTACAGGCGCTATTCACGACTGGT
GGTAAGGCAACAGAGGTATTACTGAACTTATTAGCTGAACCACCTGCCAAATCGAAGTACCCTAAAACCAATCAAAGTAT
GGACTATCCTTATAAGTGGCAGGATAAAGATAATAAAAAAGCTGATGTTAATAGTTTAACCTTATATAGACTGCCTTCTA
CCTCGCGCGCCTATCCTTTAGCATTAGATAAAAAAGTCTCTGCTTATAAAGACTTCTTCAAAAAGATAGGTAAGCTATAA

Upstream 100 bases:

>100_bases
AGCTCGGTTTTGTTTAAGCCGACTATGTTTGACTATATAGCGCTATAACAAATGAAGTAGTGTTTAACCCTGCTATGATA
GCAAAAAAACCGCTTTTCTG

Downstream 100 bases:

>100_bases
AAGTGTTATATAGAAGAAGCTATGAGGCTATATATAAGCACTAACTAAAGACAAGAATTGATTTTGGTAAAGGTAAAACC
ACTTTCAACCCTAACTGACT

Product: hypothetical protein

Products: NA

Alternate protein names: GT/U Mismatch-Specific DNA Glycosylase; DNA Glycosylase; GT/U Mismatch-Specific DNA Glycosylase-Like Protein

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKNLMTKTSPNNPIHPQKAANDFVWTQKLKTDSANIETHPFGPVLPPDATVMMMGSFPPTADKWAMRFHYPNFQNDMWRI
YGRVFFDDADYFRVGDEKRFDPERIRAFMFERGIASCPTVVQAIRETGNASDKDLTVVTTVDLDTILPQVPKVQALFTTG
GKATEVLLNLLAEPPAKSKYPKTNQSMDYPYKWQDKDNKKADVNSLTLYRLPSTSRAYPLALDKKVSAYKDFFKKIGKL

Sequences:

>Translated_239_residues
MKNLMTKTSPNNPIHPQKAANDFVWTQKLKTDSANIETHPFGPVLPPDATVMMMGSFPPTADKWAMRFHYPNFQNDMWRI
YGRVFFDDADYFRVGDEKRFDPERIRAFMFERGIASCPTVVQAIRETGNASDKDLTVVTTVDLDTILPQVPKVQALFTTG
GKATEVLLNLLAEPPAKSKYPKTNQSMDYPYKWQDKDNKKADVNSLTLYRLPSTSRAYPLALDKKVSAYKDFFKKIGKL
>Mature_239_residues
MKNLMTKTSPNNPIHPQKAANDFVWTQKLKTDSANIETHPFGPVLPPDATVMMMGSFPPTADKWAMRFHYPNFQNDMWRI
YGRVFFDDADYFRVGDEKRFDPERIRAFMFERGIASCPTVVQAIRETGNASDKDLTVVTTVDLDTILPQVPKVQALFTTG
GKATEVLLNLLAEPPAKSKYPKTNQSMDYPYKWQDKDNKKADVNSLTLYRLPSTSRAYPLALDKKVSAYKDFFKKIGKL

Specific function: Unknown

COG id: COG3663

COG function: function code L; G:T/U mismatch-specific DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27254; Mature: 27254

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLMTKTSPNNPIHPQKAANDFVWTQKLKTDSANIETHPFGPVLPPDATVMMMGSFPPT
CCCCCCCCCCCCCCCCHHHCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
ADKWAMRFHYPNFQNDMWRIYGRVFFDDADYFRVGDEKRFDPERIRAFMFERGIASCPTV
CCCEEEEEECCCCCHHHHHHHEEHEECCCCEEECCCCCCCCHHHHHHHHHHCCCCCCHHH
VQAIRETGNASDKDLTVVTTVDLDTILPQVPKVQALFTTGGKATEVLLNLLAEPPAKSKY
HHHHHHHCCCCCCCEEEEEEECHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCC
PKTNQSMDYPYKWQDKDNKKADVNSLTLYRLPSTSRAYPLALDKKVSAYKDFFKKIGKL
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNLMTKTSPNNPIHPQKAANDFVWTQKLKTDSANIETHPFGPVLPPDATVMMMGSFPPT
CCCCCCCCCCCCCCCCHHHCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
ADKWAMRFHYPNFQNDMWRIYGRVFFDDADYFRVGDEKRFDPERIRAFMFERGIASCPTV
CCCEEEEEECCCCCHHHHHHHEEHEECCCCEEECCCCCCCCHHHHHHHHHHCCCCCCHHH
VQAIRETGNASDKDLTVVTTVDLDTILPQVPKVQALFTTGGKATEVLLNLLAEPPAKSKY
HHHHHHHCCCCCCCEEEEEEECHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCC
PKTNQSMDYPYKWQDKDNKKADVNSLTLYRLPSTSRAYPLALDKKVSAYKDFFKKIGKL
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA