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The map label for this gene is cmoA [H]

Identifier: 93007066

GI number: 93007066

Start: 2751703

End: 2752491

Strand: Reverse

Name: cmoA [H]

Synonym: Pcryo_2242

Alternate gene names: 93007066

Gene position: 2752491-2751703 (Counterclockwise)

Preceding gene: 93007071

Following gene: 93007065

Centisome position: 89.95

GC content: 43.85

Gene sequence:

>789_bases
ATGAGTCACACTATGAGCCAATCTCAGCCTACCACTGTTAAACATGACACCTTATTCACCACGCCACTAGATAAAGCAGC
TCGCTTTTCATTTGATGAGCAAGTGGTGGCTTGTTTTCCGGATATGATCCGTCGCAGTGTTCCCGGTTACGGTCAGGTAT
TGGCGATGTTACCCATATTTGCTCGTCGTCATTGTAAATATCGCCAACAGAGTGATAGTGGGCAGCGTGTGAGCCGTATT
TATGATTTGGGTTGTTCACTGGGTGCTGCAAGTATGACCTTGGCTGGCGAGTTTGAGCCGCAAGATTTGCAAATTAAAGC
GATTGATATTTCACCTGCGATGACCACTGAAGCGACTACTTTACTGAATGATAATTATCCTGAGCATGACATAGAGGTCA
TCACTGCGGATATTCGCGATATTGAGCTTGAGCCATGTGATATGGTGATTTTGAATTTAACCTTACAGTTTTTACCGGCT
GCCGATAGAGTGGCAGTGTTAGAAAAGATTTATGTGGCACTCAGCGAAGGCGGTATATTGGTATTGACCGAAAAGACTCA
TGCCTTTGATGAGCAGTATGATGCGTGGTTGGTTGAACGTTATTATGATTTTAAACGCGCCAATGGCTATACCGAGATGG
AAATCAGCGGCAAACGAAATGCGCTAGAAAACGTCCTTATTACGGATACTTTAGATGAGCATCACGCACGATTGAGTGAT
GTTGGCTTTCAGCGTCATCTCACGTGGTTTCAGTTTTTAAACTTCGTCTCTATTGTGGCGTTTAAATAA

Upstream 100 bases:

>100_bases
CTTTTGCTACGCTAAAAAGCTCGTTATTATCAGCTGCTTATTATTGATAGCGTCAGTCAAGATGATTACACACGTTAAAG
TTTAGTTTAATTACCAAAGA

Downstream 100 bases:

>100_bases
TTCTTATTTTTAACACAGTTGTTTTTTGATCAATACGGTAACCTGCTTTTATGCTTAACGACACTATTACCCACGCCGAA
CGTGAACTGTATTTAACCCT

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSHTMSQSQPTTVKHDTLFTTPLDKAARFSFDEQVVACFPDMIRRSVPGYGQVLAMLPIFARRHCKYRQQSDSGQRVSRI
YDLGCSLGAASMTLAGEFEPQDLQIKAIDISPAMTTEATTLLNDNYPEHDIEVITADIRDIELEPCDMVILNLTLQFLPA
ADRVAVLEKIYVALSEGGILVLTEKTHAFDEQYDAWLVERYYDFKRANGYTEMEISGKRNALENVLITDTLDEHHARLSD
VGFQRHLTWFQFLNFVSIVAFK

Sequences:

>Translated_262_residues
MSHTMSQSQPTTVKHDTLFTTPLDKAARFSFDEQVVACFPDMIRRSVPGYGQVLAMLPIFARRHCKYRQQSDSGQRVSRI
YDLGCSLGAASMTLAGEFEPQDLQIKAIDISPAMTTEATTLLNDNYPEHDIEVITADIRDIELEPCDMVILNLTLQFLPA
ADRVAVLEKIYVALSEGGILVLTEKTHAFDEQYDAWLVERYYDFKRANGYTEMEISGKRNALENVLITDTLDEHHARLSD
VGFQRHLTWFQFLNFVSIVAFK
>Mature_261_residues
SHTMSQSQPTTVKHDTLFTTPLDKAARFSFDEQVVACFPDMIRRSVPGYGQVLAMLPIFARRHCKYRQQSDSGQRVSRIY
DLGCSLGAASMTLAGEFEPQDLQIKAIDISPAMTTEATTLLNDNYPEHDIEVITADIRDIELEPCDMVILNLTLQFLPAA
DRVAVLEKIYVALSEGGILVLTEKTHAFDEQYDAWLVERYYDFKRANGYTEMEISGKRNALENVLITDTLDEHHARLSDV
GFQRHLTWFQFLNFVSIVAFK

Specific function: Catalyzes the conversion of 5-methoxyuridine (mo5U) to uridine-5-oxyacetic acid (cmo5U) at position 34 in tRNA. May also participate in the methylation of uridine-5-oxyacetic acid (cmo5U) to uridine-5-oxyacetic acid methyl ester (mcmo5U) [H]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoA family [H]

Homologues:

Organism=Escherichia coli, GI1788177, Length=247, Percent_Identity=44.5344129554656, Blast_Score=217, Evalue=8e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR005271 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 29764; Mature: 29633

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHTMSQSQPTTVKHDTLFTTPLDKAARFSFDEQVVACFPDMIRRSVPGYGQVLAMLPIF
CCCCCCCCCCCEEECCEEEECCCCHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ARRHCKYRQQSDSGQRVSRIYDLGCSLGAASMTLAGEFEPQDLQIKAIDISPAMTTEATT
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCHHHH
LLNDNYPEHDIEVITADIRDIELEPCDMVILNLTLQFLPAADRVAVLEKIYVALSEGGIL
HHCCCCCCCCEEEEEECCCCCCCCCHHEEEEEHHHHHCCCCHHHHHHHHHHHHCCCCCEE
VLTEKTHAFDEQYDAWLVERYYDFKRANGYTEMEISGKRNALENVLITDTLDEHHARLSD
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCEEEECCHHHHHHHHHH
VGFQRHLTWFQFLNFVSIVAFK
CCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SHTMSQSQPTTVKHDTLFTTPLDKAARFSFDEQVVACFPDMIRRSVPGYGQVLAMLPIF
CCCCCCCCCCEEECCEEEECCCCHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ARRHCKYRQQSDSGQRVSRIYDLGCSLGAASMTLAGEFEPQDLQIKAIDISPAMTTEATT
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCHHHH
LLNDNYPEHDIEVITADIRDIELEPCDMVILNLTLQFLPAADRVAVLEKIYVALSEGGIL
HHCCCCCCCCEEEEEECCCCCCCCCHHEEEEEHHHHHCCCCHHHHHHHHHHHHCCCCCEE
VLTEKTHAFDEQYDAWLVERYYDFKRANGYTEMEISGKRNALENVLITDTLDEHHARLSD
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCEEEECCHHHHHHHHHH
VGFQRHLTWFQFLNFVSIVAFK
CCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA