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The map label for this gene is cmoB

Identifier: 93007065

GI number: 93007065

Start: 2750561

End: 2751652

Strand: Reverse

Name: cmoB

Synonym: Pcryo_2241

Alternate gene names: 93007065

Gene position: 2751652-2750561 (Counterclockwise)

Preceding gene: 93007066

Following gene: 93007063

Centisome position: 89.93

GC content: 46.25

Gene sequence:

>1092_bases
ATGCTTAACGACACTATTACCCACGCCGAACGTGAACTGTATTTAACCCTGCTAGAACTAGCGCAACAGCAGCCAAGTGC
TTATGAATGGCTTACGCGCTTGCCAACATGGTTAAATGATATCAAGGACAAAGCCAATTACGCGCATGCGCCTGCCTATC
AAGCATCGGTTGCGCGTTTACCGAATTTGACGGTCAATAATGTCGATCTGAACAGTGATGTCTTGACGATTGAGGCAAAT
CTTAGTGAGTCTCAGCGCAAACAAACAATGGCATTATTAAAGCAGCTGATGCCGTGGCGCAAAGGGCCTTTTCAAATTGG
TGGTCAGATCAGTAGTCGTCAAACTGTTGATACCCAAGATAACAGCGATACCAATGCGCCAATATTGATTGATACCGAAT
GGCACAGTGATTGGAAATGGCAACGAGTCGCACCGCATTTGGGTAACTTAAAAGGTCGCCGCGTCTTAGATGTTGGTGGT
GGTTCTGGTTATCATGGTTGGCGTATGGCAGGGTCAGGCGCCGATACGGTCATCATCATTGACCCATCGTGCTTGTTTTA
TCATCAGTTTATGGCGATTCGGCATTTTGTAGGTAGCGCCGATGCTCATACTTATACTCATGGTACAGGGCGTTACCGAA
CTCATTATATTCCAGTGCCGCTTGAAGCATTGCCTGAGCATAGCCAATTATTTGACACCGTATTTAGTATGGGTGTGCTC
TATCATCGCCAATCGCCGTTTGAGCACTTGCAACAGCTTAAAGGGCAGTTGGTCAAAGGTGGCGAGCTGGTACTTGAAAC
TTTGGTAATAGAAGGCGATGCCAATACGGTACTGGTACCGCATGACCGCTATGCTCAAATGAATAATGTGTATTTTTTAC
CTTCGGTTGCCGCATTAATAGGCTGGTTAGAGAAAGCTGGTTTTACTGAGGTGCGCTGCGTCGATGTGGCAGTTACCTCG
ACGGAAGAACAGCGCAAAACGGAATGGATGACTTATCATTCGTTAGCAGATTTTTTAGATCCTAATGATTCTAGCAAAAC
TCTTGAAGGCTATCCTGCGCCGCTGCGTGCTACTCTAATTGCCAAGAAATGA

Upstream 100 bases:

>100_bases
TCACGTGGTTTCAGTTTTTAAACTTCGTCTCTATTGTGGCGTTTAAATAATTCTTATTTTTAACACAGTTGTTTTTTGAT
CAATACGGTAACCTGCTTTT

Downstream 100 bases:

>100_bases
TTGCAAAAAAATAATTGGCAAAGCAGTAAATTGTCAATGCTTTTTAGATAAACCACCGTGTAAATGCCATTTCTAACAAT
ATTTTTAAGATAAAACCGAT

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MLNDTITHAERELYLTLLELAQQQPSAYEWLTRLPTWLNDIKDKANYAHAPAYQASVARLPNLTVNNVDLNSDVLTIEAN
LSESQRKQTMALLKQLMPWRKGPFQIGGQISSRQTVDTQDNSDTNAPILIDTEWHSDWKWQRVAPHLGNLKGRRVLDVGG
GSGYHGWRMAGSGADTVIIIDPSCLFYHQFMAIRHFVGSADAHTYTHGTGRYRTHYIPVPLEALPEHSQLFDTVFSMGVL
YHRQSPFEHLQQLKGQLVKGGELVLETLVIEGDANTVLVPHDRYAQMNNVYFLPSVAALIGWLEKAGFTEVRCVDVAVTS
TEEQRKTEWMTYHSLADFLDPNDSSKTLEGYPAPLRATLIAKK

Sequences:

>Translated_363_residues
MLNDTITHAERELYLTLLELAQQQPSAYEWLTRLPTWLNDIKDKANYAHAPAYQASVARLPNLTVNNVDLNSDVLTIEAN
LSESQRKQTMALLKQLMPWRKGPFQIGGQISSRQTVDTQDNSDTNAPILIDTEWHSDWKWQRVAPHLGNLKGRRVLDVGG
GSGYHGWRMAGSGADTVIIIDPSCLFYHQFMAIRHFVGSADAHTYTHGTGRYRTHYIPVPLEALPEHSQLFDTVFSMGVL
YHRQSPFEHLQQLKGQLVKGGELVLETLVIEGDANTVLVPHDRYAQMNNVYFLPSVAALIGWLEKAGFTEVRCVDVAVTS
TEEQRKTEWMTYHSLADFLDPNDSSKTLEGYPAPLRATLIAKK
>Mature_363_residues
MLNDTITHAERELYLTLLELAQQQPSAYEWLTRLPTWLNDIKDKANYAHAPAYQASVARLPNLTVNNVDLNSDVLTIEAN
LSESQRKQTMALLKQLMPWRKGPFQIGGQISSRQTVDTQDNSDTNAPILIDTEWHSDWKWQRVAPHLGNLKGRRVLDVGG
GSGYHGWRMAGSGADTVIIIDPSCLFYHQFMAIRHFVGSADAHTYTHGTGRYRTHYIPVPLEALPEHSQLFDTVFSMGVL
YHRQSPFEHLQQLKGQLVKGGELVLETLVIEGDANTVLVPHDRYAQMNNVYFLPSVAALIGWLEKAGFTEVRCVDVAVTS
TEEQRKTEWMTYHSLADFLDPNDSSKTLEGYPAPLRATLIAKK

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family

Homologues:

Organism=Escherichia coli, GI1788178, Length=335, Percent_Identity=51.6417910447761, Blast_Score=326, Evalue=2e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CMOB_PSYCK (Q1Q8I5)

Other databases:

- EMBL:   CP000323
- RefSeq:   YP_581502.1
- ProteinModelPortal:   Q1Q8I5
- STRING:   Q1Q8I5
- GeneID:   4035539
- GenomeReviews:   CP000323_GR
- KEGG:   pcr:Pcryo_2241
- NMPDR:   fig|335284.3.peg.2242
- eggNOG:   COG0500
- HOGENOM:   HBG296882
- OMA:   DVIFCLG
- PhylomeDB:   Q1Q8I5
- ProtClustDB:   PRK15068
- BioCyc:   PCRY335284:PCRYO_2241-MONOMER
- HAMAP:   MF_01590
- InterPro:   IPR010017
- TIGRFAMs:   TIGR00452

Pfam domain/function: PF08003 Methyltransf_9

EC number: NA

Molecular weight: Translated: 40910; Mature: 40910

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNDTITHAERELYLTLLELAQQQPSAYEWLTRLPTWLNDIKDKANYAHAPAYQASVARL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
PNLTVNNVDLNSDVLTIEANLSESQRKQTMALLKQLMPWRKGPFQIGGQISSRQTVDTQD
CCCEEECEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCC
NSDTNAPILIDTEWHSDWKWQRVAPHLGNLKGRRVLDVGGGSGYHGWRMAGSGADTVIII
CCCCCCCEEEECCCCCCCCHHHHCCHHCCCCCCEEEEECCCCCCCCEEEECCCCCEEEEE
DPSCLFYHQFMAIRHFVGSADAHTYTHGTGRYRTHYIPVPLEALPEHSQLFDTVFSMGVL
CCHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCHHHCCCHHHHHHHHHHHHHH
YHRQSPFEHLQQLKGQLVKGGELVLETLVIEGDANTVLVPHDRYAQMNNVYFLPSVAALI
HHCCCHHHHHHHHHHHHCCCHHEEEEEEEEECCCCEEEECCHHHHHCCCEEEHHHHHHHH
GWLEKAGFTEVRCVDVAVTSTEEQRKTEWMTYHSLADFLDPNDSSKTLEGYPAPLRATLI
HHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
AKK
ECC
>Mature Secondary Structure
MLNDTITHAERELYLTLLELAQQQPSAYEWLTRLPTWLNDIKDKANYAHAPAYQASVARL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
PNLTVNNVDLNSDVLTIEANLSESQRKQTMALLKQLMPWRKGPFQIGGQISSRQTVDTQD
CCCEEECEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCC
NSDTNAPILIDTEWHSDWKWQRVAPHLGNLKGRRVLDVGGGSGYHGWRMAGSGADTVIII
CCCCCCCEEEECCCCCCCCHHHHCCHHCCCCCCEEEEECCCCCCCCEEEECCCCCEEEEE
DPSCLFYHQFMAIRHFVGSADAHTYTHGTGRYRTHYIPVPLEALPEHSQLFDTVFSMGVL
CCHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCHHHCCCHHHHHHHHHHHHHH
YHRQSPFEHLQQLKGQLVKGGELVLETLVIEGDANTVLVPHDRYAQMNNVYFLPSVAALI
HHCCCHHHHHHHHHHHHCCCHHEEEEEEEEECCCCEEEECCHHHHHCCCEEEHHHHHHHH
GWLEKAGFTEVRCVDVAVTSTEEQRKTEWMTYHSLADFLDPNDSSKTLEGYPAPLRATLI
HHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
AKK
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA