Click here to switch to the map view.

The map label for this gene is argS [H]

Identifier: 93007063

GI number: 93007063

Start: 2748054

End: 2749883

Strand: Reverse

Name: argS [H]

Synonym: Pcryo_2239

Alternate gene names: 93007063

Gene position: 2749883-2748054 (Counterclockwise)

Preceding gene: 93007065

Following gene: 93007062

Centisome position: 89.87

GC content: 44.81

Gene sequence:

>1830_bases
ATGTCACAAGCCCAAATCGATACGCTTACCTCACTGTTTGACAGTGCGATTGCAGTCCTAAAAAATGACGGCGAATTACC
GGCTGATTGGCAAAATAATAGCCAAATTACGCGTACTAAGGATACCAGCCATGGTGATTTTGCCAGCAATATTGCCCTGA
CTGCTGCCAAAGCTGCCAAAGCCAATCCGCGCCAAGTGGCTGAAAAAATCGTTAATGCATTGCCTGAGAATCAAGATATC
CGCCAAATAGAAATCGCGGGTCCAGGGTTTATCAATGTGTTTTTGAATACTGAAGCCAAGTTTGCAGTGTTAGATGATAT
CTTCAATTTGCAAAATGGCTTTGGCTTAAGCAAGCAGTTTGACGGACAAAAAATACAGGTCGAATTTGTCTCTGCTAACC
CAACTTCTAGCTTACACGTTGGTCACGGTCGCGGCGCTGCATTTGGTATGAGCGTATCAAACTTGCTTGAGGCGATTGGC
TATGATGTCACGCGTGAGTACTATGTCAATGATGCCGGTCGCCAGATGGATATCTTAGCGACCAGTACTTATTTGCGCTA
TCTAGAAACCAATGGTGAGACTGTCACCTTCCCCGTCAACGGCTATCAAGGCGACTATGTCAGTGATATTGCTCAGACAT
TAAAGACGCAGCATGCTGATACTTACGTACATCGTTTCGCAGATATTGCCGAGAACGTGCCAGAAGATGCGCAGTTCGAA
ATAAATGCCGATGGCGAAAAAGTACTGCTATCAGGTGATAAAGAAGCCCATATCGATGGTCTAATTGCCAATAGTAAAGC
TTTACTTGGTAATGGTTATGAGCTGTTTCTAAATGCAGCATTAAGCAGTATTTTGGCTGATATCAAAGACGATCTAAATG
ACTTCGGTGTGAGTTATGAATGCTGGTTTAGTGAAAGATCAATTGATAGCGAGATTGAGCCAGTCTTACAGATTTTAGAA
GACAAAGGCTACCTCTACGAAAAAGACGGCAATATCTGGTTTAAATCGACGGATTTTGGCGATGAAAAAGACCGTGTCGT
ACGCCGCGCTAATGGGCAAAGTACCTACTTTGCCTCTGATATCGCCTATCATAAAAATAAATTCGATCGCGGTTTTGACA
AAGTCGTGAACGTTTGGGGTGCAGACCACCATGGCTATGTACCGCGCGTAAAAGCGGCTTTATTGGCGCTTGGTATCGAT
GCCGACCGTTTAGATGTGGTATTAGTGCAGTTTGTCGCATTATGGCGCGGTGATGAAAAAGTACAAATGTCATCACGCTC
TGGCAAATTTGTGACCTTACGTGAGCTACGTCACGAAGTTGGCAACGATGCAGCGCGTTTTTATTACGTCGCGCGTAAGC
CTGAAGTACATGTTGATTTTGACTTGGAGCTTGCGAAATCGCAAAGTAAAGACAACTTGGTTTATTACATTCAATATGCA
CATGCCCGCGTTTGCCGTGTGTTAGAAAAACTAGAAACCAGTGGTTTAAGTGTGGATGATGCGATAGGTGCGGCGCAGCA
AGAATTACTTGTTGCACCAAGTGAAGAGGAGTTGATTAAGCTGCTTGCCGCTTATCCTGCTACCTTGATGCGCTCAGCGA
CAGGTTATGAGCCGCACATCTTGACTAATTACCTTAAAGAGTTGGCAGCGTTATTCCATGGTTGGTACGATAGCAATCGT
ATTTTGCCTGTGAGCCTGACTTCAGGTGAGACACCAAGCGCCGATGAAATGGCGATGATGCAAGCTCGTTTACGTTTATC
TAAAGCAGTACGCCAAGTTATCAGTAACGGGCTTGGTCTATTAGGGCTGTCTGCACCGTCTAGCATGTAA

Upstream 100 bases:

>100_bases
AATAGCAGGTAAAGGTTGTTATATTTGCAGGTTACTTATCTTTTTATCGTATTTTATATTCCACCACTTTTATTGTTTAT
TTATCCGAGTTTATAGTCCT

Downstream 100 bases:

>100_bases
TAAAGCTAGCAACTGATAGTAATAATTCAATAATGACAGATAGATTCAGTAGGGAGAATGCGATCCATGTTAGCCAAAAA
ACCAAGAGGTGCCACTGAAA

Product: arginyl-tRNA synthetase

Products: NA

Alternate protein names: Arginine--tRNA ligase; ArgRS [H]

Number of amino acids: Translated: 609; Mature: 608

Protein sequence:

>609_residues
MSQAQIDTLTSLFDSAIAVLKNDGELPADWQNNSQITRTKDTSHGDFASNIALTAAKAAKANPRQVAEKIVNALPENQDI
RQIEIAGPGFINVFLNTEAKFAVLDDIFNLQNGFGLSKQFDGQKIQVEFVSANPTSSLHVGHGRGAAFGMSVSNLLEAIG
YDVTREYYVNDAGRQMDILATSTYLRYLETNGETVTFPVNGYQGDYVSDIAQTLKTQHADTYVHRFADIAENVPEDAQFE
INADGEKVLLSGDKEAHIDGLIANSKALLGNGYELFLNAALSSILADIKDDLNDFGVSYECWFSERSIDSEIEPVLQILE
DKGYLYEKDGNIWFKSTDFGDEKDRVVRRANGQSTYFASDIAYHKNKFDRGFDKVVNVWGADHHGYVPRVKAALLALGID
ADRLDVVLVQFVALWRGDEKVQMSSRSGKFVTLRELRHEVGNDAARFYYVARKPEVHVDFDLELAKSQSKDNLVYYIQYA
HARVCRVLEKLETSGLSVDDAIGAAQQELLVAPSEEELIKLLAAYPATLMRSATGYEPHILTNYLKELAALFHGWYDSNR
ILPVSLTSGETPSADEMAMMQARLRLSKAVRQVISNGLGLLGLSAPSSM

Sequences:

>Translated_609_residues
MSQAQIDTLTSLFDSAIAVLKNDGELPADWQNNSQITRTKDTSHGDFASNIALTAAKAAKANPRQVAEKIVNALPENQDI
RQIEIAGPGFINVFLNTEAKFAVLDDIFNLQNGFGLSKQFDGQKIQVEFVSANPTSSLHVGHGRGAAFGMSVSNLLEAIG
YDVTREYYVNDAGRQMDILATSTYLRYLETNGETVTFPVNGYQGDYVSDIAQTLKTQHADTYVHRFADIAENVPEDAQFE
INADGEKVLLSGDKEAHIDGLIANSKALLGNGYELFLNAALSSILADIKDDLNDFGVSYECWFSERSIDSEIEPVLQILE
DKGYLYEKDGNIWFKSTDFGDEKDRVVRRANGQSTYFASDIAYHKNKFDRGFDKVVNVWGADHHGYVPRVKAALLALGID
ADRLDVVLVQFVALWRGDEKVQMSSRSGKFVTLRELRHEVGNDAARFYYVARKPEVHVDFDLELAKSQSKDNLVYYIQYA
HARVCRVLEKLETSGLSVDDAIGAAQQELLVAPSEEELIKLLAAYPATLMRSATGYEPHILTNYLKELAALFHGWYDSNR
ILPVSLTSGETPSADEMAMMQARLRLSKAVRQVISNGLGLLGLSAPSSM
>Mature_608_residues
SQAQIDTLTSLFDSAIAVLKNDGELPADWQNNSQITRTKDTSHGDFASNIALTAAKAAKANPRQVAEKIVNALPENQDIR
QIEIAGPGFINVFLNTEAKFAVLDDIFNLQNGFGLSKQFDGQKIQVEFVSANPTSSLHVGHGRGAAFGMSVSNLLEAIGY
DVTREYYVNDAGRQMDILATSTYLRYLETNGETVTFPVNGYQGDYVSDIAQTLKTQHADTYVHRFADIAENVPEDAQFEI
NADGEKVLLSGDKEAHIDGLIANSKALLGNGYELFLNAALSSILADIKDDLNDFGVSYECWFSERSIDSEIEPVLQILED
KGYLYEKDGNIWFKSTDFGDEKDRVVRRANGQSTYFASDIAYHKNKFDRGFDKVVNVWGADHHGYVPRVKAALLALGIDA
DRLDVVLVQFVALWRGDEKVQMSSRSGKFVTLRELRHEVGNDAARFYYVARKPEVHVDFDLELAKSQSKDNLVYYIQYAH
ARVCRVLEKLETSGLSVDDAIGAAQQELLVAPSEEELIKLLAAYPATLMRSATGYEPHILTNYLKELAALFHGWYDSNRI
LPVSLTSGETPSADEMAMMQARLRLSKAVRQVISNGLGLLGLSAPSSM

Specific function: Unknown

COG id: COG0018

COG function: function code J; Arginyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI15149476, Length=640, Percent_Identity=24.0625, Blast_Score=117, Evalue=3e-26,
Organism=Escherichia coli, GI1788184, Length=638, Percent_Identity=25.2351097178683, Blast_Score=117, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71985061, Length=617, Percent_Identity=25.7698541329011, Blast_Score=109, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71985068, Length=570, Percent_Identity=25.4385964912281, Blast_Score=97, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6320548, Length=608, Percent_Identity=25.1644736842105, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6321883, Length=590, Percent_Identity=25.2542372881356, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI18859963, Length=609, Percent_Identity=22.495894909688, Blast_Score=84, Evalue=3e-16,

Paralogues:

None

Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001278
- InterPro:   IPR015945
- InterPro:   IPR005148
- InterPro:   IPR008909
- InterPro:   IPR014729
- InterPro:   IPR009080 [H]

Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d [H]

EC number: =6.1.1.19 [H]

Molecular weight: Translated: 67402; Mature: 67271

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAQIDTLTSLFDSAIAVLKNDGELPADWQNNSQITRTKDTSHGDFASNIALTAAKAAK
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHEEEHHHCC
ANPRQVAEKIVNALPENQDIRQIEIAGPGFINVFLNTEAKFAVLDDIFNLQNGFGLSKQF
CCHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCC
DGQKIQVEFVSANPTSSLHVGHGRGAAFGMSVSNLLEAIGYDVTREYYVNDAGRQMDILA
CCCEEEEEEEECCCCCCEECCCCCCCEECCCHHHHHHHHCCCCCHHEEECCCCCEEEEEE
TSTYLRYLETNGETVTFPVNGYQGDYVSDIAQTLKTQHADTYVHRFADIAENVPEDAQFE
HHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
INADGEKVLLSGDKEAHIDGLIANSKALLGNGYELFLNAALSSILADIKDDLNDFGVSYE
ECCCCCEEEEECCCCCCCCEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE
CWFSERSIDSEIEPVLQILEDKGYLYEKDGNIWFKSTDFGDEKDRVVRRANGQSTYFASD
EEECCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHCCCCCEEEEHH
IAYHKNKFDRGFDKVVNVWGADHHGYVPRVKAALLALGIDADRLDVVLVQFVALWRGDEK
HHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
VQMSSRSGKFVTLRELRHEVGNDAARFYYVARKPEVHVDFDLELAKSQSKDNLVYYIQYA
EEECCCCCCEEEHHHHHHHHCCCCEEEEEEECCCCEEEEEEHHHHCCCCCCCEEEEEEHH
HARVCRVLEKLETSGLSVDDAIGAAQQELLVAPSEEELIKLLAAYPATLMRSATGYEPHI
HHHHHHHHHHHHHCCCCHHHHHCHHHHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHH
LTNYLKELAALFHGWYDSNRILPVSLTSGETPSADEMAMMQARLRLSKAVRQVISNGLGL
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE
LGLSAPSSM
EEECCCCCC
>Mature Secondary Structure 
SQAQIDTLTSLFDSAIAVLKNDGELPADWQNNSQITRTKDTSHGDFASNIALTAAKAAK
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHEEEHHHCC
ANPRQVAEKIVNALPENQDIRQIEIAGPGFINVFLNTEAKFAVLDDIFNLQNGFGLSKQF
CCHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCC
DGQKIQVEFVSANPTSSLHVGHGRGAAFGMSVSNLLEAIGYDVTREYYVNDAGRQMDILA
CCCEEEEEEEECCCCCCEECCCCCCCEECCCHHHHHHHHCCCCCHHEEECCCCCEEEEEE
TSTYLRYLETNGETVTFPVNGYQGDYVSDIAQTLKTQHADTYVHRFADIAENVPEDAQFE
HHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
INADGEKVLLSGDKEAHIDGLIANSKALLGNGYELFLNAALSSILADIKDDLNDFGVSYE
ECCCCCEEEEECCCCCCCCEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE
CWFSERSIDSEIEPVLQILEDKGYLYEKDGNIWFKSTDFGDEKDRVVRRANGQSTYFASD
EEECCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHCCCCCEEEEHH
IAYHKNKFDRGFDKVVNVWGADHHGYVPRVKAALLALGIDADRLDVVLVQFVALWRGDEK
HHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
VQMSSRSGKFVTLRELRHEVGNDAARFYYVARKPEVHVDFDLELAKSQSKDNLVYYIQYA
EEECCCCCCEEEHHHHHHHHCCCCEEEEEEECCCCEEEEEEHHHHCCCCCCCEEEEEEHH
HARVCRVLEKLETSGLSVDDAIGAAQQELLVAPSEEELIKLLAAYPATLMRSATGYEPHI
HHHHHHHHHHHHHCCCCHHHHHCHHHHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHH
LTNYLKELAALFHGWYDSNRILPVSLTSGETPSADEMAMMQARLRLSKAVRQVISNGLGL
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE
LGLSAPSSM
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA