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The map label for this gene is ybeQ [H]

Identifier: 93007054

GI number: 93007054

Start: 2736889

End: 2737683

Strand: Direct

Name: ybeQ [H]

Synonym: Pcryo_2230

Alternate gene names: 93007054

Gene position: 2736889-2737683 (Clockwise)

Preceding gene: 93007053

Following gene: 93007056

Centisome position: 89.44

GC content: 41.01

Gene sequence:

>795_bases
ATGCTTATCTGGTTTGTAGTCGGAGCGATAGCCTTATCTGTAATAGCATTTAAATATTATGGAAGAAACAGAGAATCTGA
TAGTTTTAAGCTTATGGAGAGATTAGCTAGCCAAGGGGATGCGCGAGCTCAAATAAATCTTGCCATGATGTATTACGGTG
GTACAGGCGTACGTCAAGATCTTCCTAAAGCTATTCAATGGGCAGAAAAACCAGCTCGGCAAGGTAATGCTGAGGCTCTA
TTTGTTATGGGTATGATGCATACTCAAAAGAATGATACTAAGGCTTTTGAGTTTTACCTACAATCAGCTAATCAGGGCTA
TCCTAGTGCTCAGAACATGGTTGGCCTTTCATACAAGGAAGGAAGAGGTGTACAACAAGACTATACCAAGGCATTTGAAT
GGATACAAAAAGCAGCTAATCAGGGCTATCCTAGTGCTCAATACGAGCTTAGTCTAATGTATGAGAAAGGCATAGGCGTA
AAACAGGATAACGCTAAAGCGTTTGAGTGGTATCTAAAATCAGCTAACCAAGGTAATGCGCAAGCTCAAAGCAATCTTGG
TGCTATGTATGATCAAGGCATAGGCGTACAACAAGACTATGCCAAGGCATTTGAATGGTATACAAGATCAGCTAGCCAAG
GTGATGCGCGAGCTCAATTTAATCTTGGTAGGATGTATCATTTTGGCAAAGGTGTACAACAAGATGATGCTAAGGCACGT
GATTGGCTGGGTAAGTCTTGCAAAAACGGGTTTCAAGATGCTTGCACCATTTATCGATTATTACCTAAAAGATAG

Upstream 100 bases:

>100_bases
TTCTATAGCAGCGTTTTAATTTTCTTTTATCTATTGCAGTCGTTATTTCATAGTTGTATTTATTTTTTAAAATCTAGCAG
TCTTATTTAGGAAAGTGTAT

Downstream 100 bases:

>100_bases
ATCGCTGTAACCATAGTTAAGCTGCATACACTCAATCCCATGGCTGTTGTTCTTTATCAGTAGCATACCTAGCCATAGCT
ATTAAAGACTCTTTACCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MLIWFVVGAIALSVIAFKYYGRNRESDSFKLMERLASQGDARAQINLAMMYYGGTGVRQDLPKAIQWAEKPARQGNAEAL
FVMGMMHTQKNDTKAFEFYLQSANQGYPSAQNMVGLSYKEGRGVQQDYTKAFEWIQKAANQGYPSAQYELSLMYEKGIGV
KQDNAKAFEWYLKSANQGNAQAQSNLGAMYDQGIGVQQDYAKAFEWYTRSASQGDARAQFNLGRMYHFGKGVQQDDAKAR
DWLGKSCKNGFQDACTIYRLLPKR

Sequences:

>Translated_264_residues
MLIWFVVGAIALSVIAFKYYGRNRESDSFKLMERLASQGDARAQINLAMMYYGGTGVRQDLPKAIQWAEKPARQGNAEAL
FVMGMMHTQKNDTKAFEFYLQSANQGYPSAQNMVGLSYKEGRGVQQDYTKAFEWIQKAANQGYPSAQYELSLMYEKGIGV
KQDNAKAFEWYLKSANQGNAQAQSNLGAMYDQGIGVQQDYAKAFEWYTRSASQGDARAQFNLGRMYHFGKGVQQDDAKAR
DWLGKSCKNGFQDACTIYRLLPKR
>Mature_264_residues
MLIWFVVGAIALSVIAFKYYGRNRESDSFKLMERLASQGDARAQINLAMMYYGGTGVRQDLPKAIQWAEKPARQGNAEAL
FVMGMMHTQKNDTKAFEFYLQSANQGYPSAQNMVGLSYKEGRGVQQDYTKAFEWIQKAANQGYPSAQYELSLMYEKGIGV
KQDNAKAFEWYLKSANQGNAQAQSNLGAMYDQGIGVQQDYAKAFEWYTRSASQGDARAQFNLGRMYHFGKGVQQDDAKAR
DWLGKSCKNGFQDACTIYRLLPKR

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=197, Percent_Identity=32.48730964467, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI151301150, Length=188, Percent_Identity=31.9148936170213, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI217330658, Length=151, Percent_Identity=29.8013245033113, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI217330656, Length=151, Percent_Identity=29.8013245033113, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI33620759, Length=200, Percent_Identity=27.5, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI87081769, Length=256, Percent_Identity=37.5, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1786867, Length=126, Percent_Identity=37.3015873015873, Blast_Score=82, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17563256, Length=231, Percent_Identity=29.4372294372294, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI21355295, Length=225, Percent_Identity=30.6666666666667, Blast_Score=96, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 29813; Mature: 29813

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIWFVVGAIALSVIAFKYYGRNRESDSFKLMERLASQGDARAQINLAMMYYGGTGVRQD
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHH
LPKAIQWAEKPARQGNAEALFVMGMMHTQKNDTKAFEFYLQSANQGYPSAQNMVGLSYKE
HHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCHHHHHHHHHHCCCCCCCHHHCCCCCHHC
GRGVQQDYTKAFEWIQKAANQGYPSAQYELSLMYEKGIGVKQDNAKAFEWYLKSANQGNA
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCH
QAQSNLGAMYDQGIGVQQDYAKAFEWYTRSASQGDARAQFNLGRMYHFGKGVQQDDAKAR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
DWLGKSCKNGFQDACTIYRLLPKR
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLIWFVVGAIALSVIAFKYYGRNRESDSFKLMERLASQGDARAQINLAMMYYGGTGVRQD
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHH
LPKAIQWAEKPARQGNAEALFVMGMMHTQKNDTKAFEFYLQSANQGYPSAQNMVGLSYKE
HHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCHHHHHHHHHHCCCCCCCHHHCCCCCHHC
GRGVQQDYTKAFEWIQKAANQGYPSAQYELSLMYEKGIGVKQDNAKAFEWYLKSANQGNA
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCH
QAQSNLGAMYDQGIGVQQDYAKAFEWYTRSASQGDARAQFNLGRMYHFGKGVQQDDAKAR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
DWLGKSCKNGFQDACTIYRLLPKR
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]