| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is pstS [H]
Identifier: 93007043
GI number: 93007043
Start: 2723659
End: 2724813
Strand: Direct
Name: pstS [H]
Synonym: Pcryo_2219
Alternate gene names: 93007043
Gene position: 2723659-2724813 (Clockwise)
Preceding gene: 93007042
Following gene: 93007044
Centisome position: 89.01
GC content: 47.01
Gene sequence:
>1155_bases ATGCGTTATTCATTCATGGCAGTAGCAATCGCTAGCACTTTGACATTAGCCGCTTGTAACCAAACGACTAGCAACAACGA GAGCGATAAAACCGACGAAGCAGCCACAACAGCACCATCAAACACTGCTGTGAGTAGCGACGCTAGTGCTAGCTCAGCTG AAAGTGCATCGATGAGTATTACCGGTGCTGGTGCTTCTTTTCCACAGCCTATCTATGCTAAGTGGTCAGATGCCTACAAT AAAGCCACAGGTGGTCAAGTGAACTATCAGTCTATTGGCTCATCAGGTGGTATCAAACAAATCGTTGCTAAGACGGTAGA TTTTGGGGCATCTGATGCGCCGATGACACCAGAAGAGTTGAACGAAGCCGGTCTGATACAGTTCCCAAGCGTCATCGGTG GCGTGGTACCTATTGTTAATATCGATGGTATTGAGCCCGGTCAGTTAAAGCTCGATGGCAAAATGCTTGCTGATATTTAT CTGGGTAAAATCAGCAAATGGAACGACCCTGCAATTGCGGCGATGAATCCTGAACTTAAATTACCAGACGCTGCCATTAC CACAGTGTTTCGCTCAGATGGTTCTGGTACAACCTTTAACTTCACTGATTATCTAGCCAAAGTGTCAAGCGATTGGAATG ACAGTGTAGGTGTCGATAAGACCGTCAAATGGCCAACGTCGGCTACCGGTGCGGGTGGTAAAGGTAATGAAGGTGTGTCG AGCTATGTCACGCGTATGAAAAACTCTATCGGCTATGTTGAATACGCTTACGCTAAGCAAAACGGTATGGCACACGTCGC CCTGAAAAATGCTGCGGGCAATGTCGTACAACCTTCTGCCAAAACCTTTGCAGCAGCAGGTGACATCGATTGGTCACAGC AAGAAGGCTTTTATAAAGTCATTACCAACTCTGAAACAGCGCAAGCTTGGCCAATCGCCGCCGCCACTTTTATCTTAGTA CATAAGCAGCCACAAGATGCCAAACAAGTCGCTGGTGTATTGAAGTTCTTTGACTGGGCTTATGAGCAAGGTGATGACGA CGCTATGGCGCTTGATTACGTACCGTTCTCTGATACTGCAGTTGCCTTATTTAAAGCAAAATGGAGTGAGGTCAAAGGCA GTGACGGCCAACCTGTCTATAAGCCTGCACAGTAA
Upstream 100 bases:
>100_bases TATTAACCGCAGAGCATCATTTCAGCCAACCCCAGAAAACCATTGTCATTGTTATTTATAAATGCTTGATACTCAAAATT GATTAATTTTAGGAGAAATA
Downstream 100 bases:
>100_bases CCTGTTTATACTAGTGATTGCATAATCACTGTCGAGCCAACCTCTCAAACCACTATTCTCCGGTAGGGGTTTGAGAGGTT TTATCACAGAAAATTTAAAG
Product: periplasmic phosphate binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MRYSFMAVAIASTLTLAACNQTTSNNESDKTDEAATTAPSNTAVSSDASASSAESASMSITGAGASFPQPIYAKWSDAYN KATGGQVNYQSIGSSGGIKQIVAKTVDFGASDAPMTPEELNEAGLIQFPSVIGGVVPIVNIDGIEPGQLKLDGKMLADIY LGKISKWNDPAIAAMNPELKLPDAAITTVFRSDGSGTTFNFTDYLAKVSSDWNDSVGVDKTVKWPTSATGAGGKGNEGVS SYVTRMKNSIGYVEYAYAKQNGMAHVALKNAAGNVVQPSAKTFAAAGDIDWSQQEGFYKVITNSETAQAWPIAAATFILV HKQPQDAKQVAGVLKFFDWAYEQGDDDAMALDYVPFSDTAVALFKAKWSEVKGSDGQPVYKPAQ
Sequences:
>Translated_384_residues MRYSFMAVAIASTLTLAACNQTTSNNESDKTDEAATTAPSNTAVSSDASASSAESASMSITGAGASFPQPIYAKWSDAYN KATGGQVNYQSIGSSGGIKQIVAKTVDFGASDAPMTPEELNEAGLIQFPSVIGGVVPIVNIDGIEPGQLKLDGKMLADIY LGKISKWNDPAIAAMNPELKLPDAAITTVFRSDGSGTTFNFTDYLAKVSSDWNDSVGVDKTVKWPTSATGAGGKGNEGVS SYVTRMKNSIGYVEYAYAKQNGMAHVALKNAAGNVVQPSAKTFAAAGDIDWSQQEGFYKVITNSETAQAWPIAAATFILV HKQPQDAKQVAGVLKFFDWAYEQGDDDAMALDYVPFSDTAVALFKAKWSEVKGSDGQPVYKPAQ >Mature_384_residues MRYSFMAVAIASTLTLAACNQTTSNNESDKTDEAATTAPSNTAVSSDASASSAESASMSITGAGASFPQPIYAKWSDAYN KATGGQVNYQSIGSSGGIKQIVAKTVDFGASDAPMTPEELNEAGLIQFPSVIGGVVPIVNIDGIEPGQLKLDGKMLADIY LGKISKWNDPAIAAMNPELKLPDAAITTVFRSDGSGTTFNFTDYLAKVSSDWNDSVGVDKTVKWPTSATGAGGKGNEGVS SYVTRMKNSIGYVEYAYAKQNGMAHVALKNAAGNVVQPSAKTFAAAGDIDWSQQEGFYKVITNSETAQAWPIAAATFILV HKQPQDAKQVAGVLKFFDWAYEQGDDDAMALDYVPFSDTAVALFKAKWSEVKGSDGQPVYKPAQ
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=327, Percent_Identity=55.3516819571865, Blast_Score=358, Evalue=1e-100,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 40468; Mature: 40468
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYSFMAVAIASTLTLAACNQTTSNNESDKTDEAATTAPSNTAVSSDASASSAESASMSI CCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEE TGAGASFPQPIYAKWSDAYNKATGGQVNYQSIGSSGGIKQIVAKTVDFGASDAPMTPEEL EECCCCCCCCHHHHHHHHHCCCCCCEEEHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHH NEAGLIQFPSVIGGVVPIVNIDGIEPGQLKLDGKMLADIYLGKISKWNDPAIAAMNPELK CCCCCEECHHHHCCCEEEEEECCCCCCCEEECCEEEEHHHHHCCCCCCCCEEEEECCCCC LPDAAITTVFRSDGSGTTFNFTDYLAKVSSDWNDSVGVDKTVKWPTSATGAGGKGNEGVS CCCHHEEEEEECCCCCCEEEHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCHHH SYVTRMKNSIGYVEYAYAKQNGMAHVALKNAAGNVVQPSAKTFAAAGDIDWSQQEGFYKV HHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCHHEEECCCCCCCCCCCEEEE ITNSETAQAWPIAAATFILVHKQPQDAKQVAGVLKFFDWAYEQGDDDAMALDYVPFSDTA EECCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCE VALFKAKWSEVKGSDGQPVYKPAQ EEEHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MRYSFMAVAIASTLTLAACNQTTSNNESDKTDEAATTAPSNTAVSSDASASSAESASMSI CCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEE TGAGASFPQPIYAKWSDAYNKATGGQVNYQSIGSSGGIKQIVAKTVDFGASDAPMTPEEL EECCCCCCCCHHHHHHHHHCCCCCCEEEHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHH NEAGLIQFPSVIGGVVPIVNIDGIEPGQLKLDGKMLADIYLGKISKWNDPAIAAMNPELK CCCCCEECHHHHCCCEEEEEECCCCCCCEEECCEEEEHHHHHCCCCCCCCEEEEECCCCC LPDAAITTVFRSDGSGTTFNFTDYLAKVSSDWNDSVGVDKTVKWPTSATGAGGKGNEGVS CCCHHEEEEEECCCCCCEEEHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCHHH SYVTRMKNSIGYVEYAYAKQNGMAHVALKNAAGNVVQPSAKTFAAAGDIDWSQQEGFYKV HHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCHHEEECCCCCCCCCCCEEEE ITNSETAQAWPIAAATFILVHKQPQDAKQVAGVLKFFDWAYEQGDDDAMALDYVPFSDTA EECCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCE VALFKAKWSEVKGSDGQPVYKPAQ EEEHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]