| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is yceI [C]
Identifier: 93007032
GI number: 93007032
Start: 2712777
End: 2713400
Strand: Direct
Name: yceI [C]
Synonym: Pcryo_2208
Alternate gene names: 93007032
Gene position: 2712777-2713400 (Clockwise)
Preceding gene: 93007030
Following gene: 93007034
Centisome position: 88.66
GC content: 41.51
Gene sequence:
>624_bases ATGAAAAATACAATCGCGAAAAACAGTATAAAAGCTGTTCTATTTGGCTCAGCAATTGCTATGACAACACTGGCAAGTGC GGCGCTGCCAACTCAATGGCAGCTAGATGATGCACATACGCGTGTCGGATTTTCAGTCAATCACTTAGGGTTTTCGACCA CCATGGGTCACTTTAATGATGTCAAAGGCATGGTCAATTACAATATTAAAGCACCTAATAAAGCCAATATGAATTTCACT ATTGTTACTGACAGTATCGATACCAATTGGGATGCTCGCGATGCTCATTTAAAAAAAGATGAGTTTTTTAATGTAGCAAA ATATCCAACCATGACTTTTAAATCGACTAACATCACCTTTAAGAATCCACAACAAGCCACAGTCACAGGTGACTTCACTC TACTGGGTCAAACCAAGCCACTGACCCTAGATGTGACTCTGAATAAAATAGCCAATAGCCCGATGACCAAAGAGCCAGTT ATTGGTTTTCGTGCAACCGGTGTGATTGACCGTGCCGCTTATGGCATGACCGCTTTTGCAAGTGGCATTACGACTGAAGT ACCCATTCAAATAGACGGTGAGCTGATTGAGAAAAAAGCGGCGACGAAGAATAAAGCAAAATAG
Upstream 100 bases:
>100_bases CTATTAATTTTTAAGATTAATTTAATAATAATATTCAATTAGTATTGGTGATTTAATTATCAATACTAATTGAATACTAA CATTTAATAAGGATAAGACA
Downstream 100 bases:
>100_bases CTTTATACATATCAATGTTATGCTTTTATGAAGTAAGTTTGCAGTTAAAAATATCGTAATAAAAAGCAGCCACAATGATG GCTGCTTTTTTATGGTAAAA
Product: YceI protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKNTIAKNSIKAVLFGSAIAMTTLASAALPTQWQLDDAHTRVGFSVNHLGFSTTMGHFNDVKGMVNYNIKAPNKANMNFT IVTDSIDTNWDARDAHLKKDEFFNVAKYPTMTFKSTNITFKNPQQATVTGDFTLLGQTKPLTLDVTLNKIANSPMTKEPV IGFRATGVIDRAAYGMTAFASGITTEVPIQIDGELIEKKAATKNKAK
Sequences:
>Translated_207_residues MKNTIAKNSIKAVLFGSAIAMTTLASAALPTQWQLDDAHTRVGFSVNHLGFSTTMGHFNDVKGMVNYNIKAPNKANMNFT IVTDSIDTNWDARDAHLKKDEFFNVAKYPTMTFKSTNITFKNPQQATVTGDFTLLGQTKPLTLDVTLNKIANSPMTKEPV IGFRATGVIDRAAYGMTAFASGITTEVPIQIDGELIEKKAATKNKAK >Mature_207_residues MKNTIAKNSIKAVLFGSAIAMTTLASAALPTQWQLDDAHTRVGFSVNHLGFSTTMGHFNDVKGMVNYNIKAPNKANMNFT IVTDSIDTNWDARDAHLKKDEFFNVAKYPTMTFKSTNITFKNPQQATVTGDFTLLGQTKPLTLDVTLNKIANSPMTKEPV IGFRATGVIDRAAYGMTAFASGITTEVPIQIDGELIEKKAATKNKAK
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=193, Percent_Identity=34.1968911917098, Blast_Score=99, Evalue=2e-22,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 22566; Mature: 22566
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTIAKNSIKAVLFGSAIAMTTLASAALPTQWQLDDAHTRVGFSVNHLGFSTTMGHFND CCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEECCCCCEEECEEEECCCCCCCCCCCCC VKGMVNYNIKAPNKANMNFTIVTDSIDTNWDARDAHLKKDEFFNVAKYPTMTFKSTNITF CCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCEEHCCCCEEEEEECCEEE KNPQQATVTGDFTLLGQTKPLTLDVTLNKIANSPMTKEPVIGFRATGVIDRAAYGMTAFA CCCCCEEEEEEEEEECCCCCEEEEEEEHHHCCCCCCCCCCCEEEECCCHHHHHHCHHHHH SGITTEVPIQIDGELIEKKAATKNKAK CCCCEECCEEECHHHHHHHHCCCCCCC >Mature Secondary Structure MKNTIAKNSIKAVLFGSAIAMTTLASAALPTQWQLDDAHTRVGFSVNHLGFSTTMGHFND CCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEECCCCCEEECEEEECCCCCCCCCCCCC VKGMVNYNIKAPNKANMNFTIVTDSIDTNWDARDAHLKKDEFFNVAKYPTMTFKSTNITF CCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCEEHCCCCEEEEEECCEEE KNPQQATVTGDFTLLGQTKPLTLDVTLNKIANSPMTKEPVIGFRATGVIDRAAYGMTAFA CCCCCEEEEEEEEEECCCCCEEEEEEEHHHCCCCCCCCCCCEEEECCCHHHHHHCHHHHH SGITTEVPIQIDGELIEKKAATKNKAK CCCCEECCEEECHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA