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The map label for this gene is ycbR [H]

Identifier: 93006960

GI number: 93006960

Start: 2614696

End: 2615991

Strand: Reverse

Name: ycbR [H]

Synonym: Pcryo_2136

Alternate gene names: 93006960

Gene position: 2615991-2614696 (Counterclockwise)

Preceding gene: 93006961

Following gene: 93006959

Centisome position: 85.49

GC content: 47.07

Gene sequence:

>1296_bases
ATGAACCATCTCACCGTCGGACAACGCTCGCCTTTAAGCAATCTTGCTATTGACGATACCGCACCAATCACGCTCAAATT
CACTCGCCAAAGCCCAATAGAGATGGACATCAGTTGCTTTGCCTTAGATGCAGCGGGCAAACTGATCAATGATGATTACA
TGGTGTTTTATAATCAGCCGACCTCTCCATGTGGGCAAATCAAGCTCACCCATTACGAATCGCAGCCAACGGCGAATAAA
GGTATCCAAGCTGAGTTTGAAGTGAATTTATCCAAACTGGCTACCAATATAGACAGCTTGTTTTTTGTGTTATCAGCCGA
CACCCCGCTCAATCAAATTCAATCGTTAGAGATTGGTATTTGGCAGCAATCGCAAAAGGTACAGGCAGAATATCAAGCAG
TAGATTTTGCCCAGCAGCAAGCCAGTATGTTGATGCAGCTTTATCGTAAGAGTGGCGTTTGGCGAGTGTCCAACGTCGCG
CAAGGCTTTAATGGTGGACTTGCCGCCATCGTGCAGCATTTCGGTGGCGATGTAGAAGAGGGCAGCCCACAAGCAGTAGA
GGCGACCGTCACGCCAGTTAAAGCAAAACCGTCATTAGAGAAGGTCATGCTAGACAAAGCGCCAAAACTCGTCAATCTGG
CCAAAAAAGCCACGATATCGCTTGAGAAACGCCAATTGCAGAAATTGACCGCAAAGGTAGCATTGGTGTTAGATGCCTCA
GGCTCAATGAACAGACAGTACAAAAAAGGCCGCGTGCAAGAAGTGGTCAACCGCATATTGCCATTGGCAGTGAGCTTCGA
TGACGACCAAGCGCTAGACTGCTGGGCGTTTGCCCGAGATCCGCAGTATTTGGGCGAGATTGGGCTTAGCAACTATGACG
GTTTCATCAATAACGCTCATGGTGGCTGGCGCAAATGGGCACTTGGCCCGCGCATTAACAATGAAGCAGAAGTCATGAAA
GCCGTGACGGATTTTTATCAAAAAGACGGCTTGGATGTGCCCGTATACGTGCTATTTATCAGTGATGGCGGGGTGAATGA
CAATCGCGGTATCACCAGAGTCATGACGGACGCCGCGAAACTACCGATATTTTGGCAGTTTGTGGGCTTGGGTGGTCGTG
GTTATGGCATCCTAAAAAAACTAGATGACATGGAAGGGCGCGTGATTGATAATTGCGATTTTTTTGAATTAGATGATTTG
GATGACATTAGTGAAGAGTCTCTTTATGAGAGTATGCTAGAAGAGTTCCCAAGCTGGCTAAAAGAAGCTCGTAAGATTGG
ATTGATAACATCATAA

Upstream 100 bases:

>100_bases
TATCTTTAAAGAGATTGAACGACATGAAGTTTAAAAACTAGTAGAAGCGCTTTAGTGCGCTATTATTTTTATAATTATCT
TTATGAATGTAAGGAACACC

Downstream 100 bases:

>100_bases
CTGAGGAGTAACCGCCATGTTCACTGTGAAAACAACATCAACTACAAAAGCCCTCACTTTAAGTGCTTTGTTTTTAAGTC
TAAGCGCTTGCGTCTCTTTA

Product: stress protein

Products: NA

Alternate protein names: ORF17 [H]

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MNHLTVGQRSPLSNLAIDDTAPITLKFTRQSPIEMDISCFALDAAGKLINDDYMVFYNQPTSPCGQIKLTHYESQPTANK
GIQAEFEVNLSKLATNIDSLFFVLSADTPLNQIQSLEIGIWQQSQKVQAEYQAVDFAQQQASMLMQLYRKSGVWRVSNVA
QGFNGGLAAIVQHFGGDVEEGSPQAVEATVTPVKAKPSLEKVMLDKAPKLVNLAKKATISLEKRQLQKLTAKVALVLDAS
GSMNRQYKKGRVQEVVNRILPLAVSFDDDQALDCWAFARDPQYLGEIGLSNYDGFINNAHGGWRKWALGPRINNEAEVMK
AVTDFYQKDGLDVPVYVLFISDGGVNDNRGITRVMTDAAKLPIFWQFVGLGGRGYGILKKLDDMEGRVIDNCDFFELDDL
DDISEESLYESMLEEFPSWLKEARKIGLITS

Sequences:

>Translated_431_residues
MNHLTVGQRSPLSNLAIDDTAPITLKFTRQSPIEMDISCFALDAAGKLINDDYMVFYNQPTSPCGQIKLTHYESQPTANK
GIQAEFEVNLSKLATNIDSLFFVLSADTPLNQIQSLEIGIWQQSQKVQAEYQAVDFAQQQASMLMQLYRKSGVWRVSNVA
QGFNGGLAAIVQHFGGDVEEGSPQAVEATVTPVKAKPSLEKVMLDKAPKLVNLAKKATISLEKRQLQKLTAKVALVLDAS
GSMNRQYKKGRVQEVVNRILPLAVSFDDDQALDCWAFARDPQYLGEIGLSNYDGFINNAHGGWRKWALGPRINNEAEVMK
AVTDFYQKDGLDVPVYVLFISDGGVNDNRGITRVMTDAAKLPIFWQFVGLGGRGYGILKKLDDMEGRVIDNCDFFELDDL
DDISEESLYESMLEEFPSWLKEARKIGLITS
>Mature_431_residues
MNHLTVGQRSPLSNLAIDDTAPITLKFTRQSPIEMDISCFALDAAGKLINDDYMVFYNQPTSPCGQIKLTHYESQPTANK
GIQAEFEVNLSKLATNIDSLFFVLSADTPLNQIQSLEIGIWQQSQKVQAEYQAVDFAQQQASMLMQLYRKSGVWRVSNVA
QGFNGGLAAIVQHFGGDVEEGSPQAVEATVTPVKAKPSLEKVMLDKAPKLVNLAKKATISLEKRQLQKLTAKVALVLDAS
GSMNRQYKKGRVQEVVNRILPLAVSFDDDQALDCWAFARDPQYLGEIGLSNYDGFINNAHGGWRKWALGPRINNEAEVMK
AVTDFYQKDGLDVPVYVLFISDGGVNDNRGITRVMTDAAKLPIFWQFVGLGGRGYGILKKLDDMEGRVIDNCDFFELDDL
DDISEESLYESMLEEFPSWLKEARKIGLITS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47893; Mature: 47893

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLTVGQRSPLSNLAIDDTAPITLKFTRQSPIEMDISCFALDAAGKLINDDYMVFYNQP
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECEEEEEEECCCCEECCCEEEEECCC
TSPCGQIKLTHYESQPTANKGIQAEFEVNLSKLATNIDSLFFVLSADTPLNQIQSLEIGI
CCCCCCEEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHEEEEEECCCCHHHHHCCEEEE
WQQSQKVQAEYQAVDFAQQQASMLMQLYRKSGVWRVSNVAQGFNGGLAAIVQHFGGDVEE
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCHHHHHHHHHCCCCCC
GSPQAVEATVTPVKAKPSLEKVMLDKAPKLVNLAKKATISLEKRQLQKLTAKVALVLDAS
CCCCEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
GSMNRQYKKGRVQEVVNRILPLAVSFDDDQALDCWAFARDPQYLGEIGLSNYDGFINNAH
CCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEECCCHHHHHHCCCCCCCCCCCCCC
GGWRKWALGPRINNEAEVMKAVTDFYQKDGLDVPVYVLFISDGGVNDNRGITRVMTDAAK
CCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHC
LPIFWQFVGLGGRGYGILKKLDDMEGRVIDNCDFFELDDLDDISEESLYESMLEEFPSWL
CCEEEEEEECCCCCCHHHHHHHCCCCCEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHH
KEARKIGLITS
HHHHHCCCCCC
>Mature Secondary Structure
MNHLTVGQRSPLSNLAIDDTAPITLKFTRQSPIEMDISCFALDAAGKLINDDYMVFYNQP
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECEEEEEEECCCCEECCCEEEEECCC
TSPCGQIKLTHYESQPTANKGIQAEFEVNLSKLATNIDSLFFVLSADTPLNQIQSLEIGI
CCCCCCEEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHEEEEEECCCCHHHHHCCEEEE
WQQSQKVQAEYQAVDFAQQQASMLMQLYRKSGVWRVSNVAQGFNGGLAAIVQHFGGDVEE
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCHHHHHHHHHCCCCCC
GSPQAVEATVTPVKAKPSLEKVMLDKAPKLVNLAKKATISLEKRQLQKLTAKVALVLDAS
CCCCEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
GSMNRQYKKGRVQEVVNRILPLAVSFDDDQALDCWAFARDPQYLGEIGLSNYDGFINNAH
CCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEECCCHHHHHHCCCCCCCCCCCCCC
GGWRKWALGPRINNEAEVMKAVTDFYQKDGLDVPVYVLFISDGGVNDNRGITRVMTDAAK
CCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHC
LPIFWQFVGLGGRGYGILKKLDDMEGRVIDNCDFFELDDLDDISEESLYESMLEEFPSWL
CCEEEEEEECCCCCCHHHHHHHCCCCCEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHH
KEARKIGLITS
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377; 8760916 [H]