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The map label for this gene is nudL [H]

Identifier: 93006949

GI number: 93006949

Start: 2602765

End: 2603502

Strand: Reverse

Name: nudL [H]

Synonym: Pcryo_2125

Alternate gene names: 93006949

Gene position: 2603502-2602765 (Counterclockwise)

Preceding gene: 93006953

Following gene: 93006946

Centisome position: 85.09

GC content: 47.43

Gene sequence:

>738_bases
ATGCTAAATCCCTCACAGTCCGTACGTTTTGATGAAATGACAGTTGCTGTACCAGATTTTATACGTTATCCCACGATCAG
AAAGTTGGCTGAACGGGTGCAGCACGAGACCTTAAAGGCTATTGCTAGTCCCGCGCTTTATGACTCTCACGACCATTCGC
GCAGTGCCCGTATTTTAAATAGTCTTTATCAAACCCCAATCGCCGATGCCTCTATCTTGGTCGCTATCACTCATGAGCGC
CATCCTAAGCTGCTGCTGACTCGCCGCGCTGCTCATATGAACAGTCATGCTGGCGAGGTATCCTGTGCTGGTGGCAAACA
TGAACTAGGTGATGGTAACAATGTCGTTACCGCCCTACGTGAGGCTTGCGAGGAAACTGCGCTACCGCCTAATAAAGTTC
AGCTGCTTGGTCAATTGCCTATCCAAACCTCTAAAAGTGGTATGAGTGTACGTCCTATTGTGGCACTTATTGCGCCAGAT
CTGCTTTTGGTACCAGAGCTTGGGGAGATATCACGCATTTTTTGGGCAGATTTTGAGACTTTATTAACTCAGCCAACAGT
CGAATATTCCATAGAATATACATTGCAAGATCAGGCAGCAACGCTTCTGACACCGAGCTGGCAAGTAGATGGCGAAACAG
TGTGGGGTCTGACGGGACGAGTCATTGCCAGTTTATTAGAAACAGGCTTTGATCGGCAACTAGAGTGGTATTACCGCATA
CAAGATACTCGATCATAG

Upstream 100 bases:

>100_bases
TGATAAAAGACCATGTCTGTCTGACGGTTGTCGCAATCTGCTTGCTGCAACTATTCAAGGTTTTGATGGCTAATACTGAT
AAAAATACAGGGCAATTATA

Downstream 100 bases:

>100_bases
AAGTGTTAGATACTCGCTAATAATCATGTTTTTGGCGAAGGAGGATCGTTATTATAAACGTTAGTGATAATAAATGAATG
CATTCTATTTATAATACTCA

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLNPSQSVRFDEMTVAVPDFIRYPTIRKLAERVQHETLKAIASPALYDSHDHSRSARILNSLYQTPIADASILVAITHER
HPKLLLTRRAAHMNSHAGEVSCAGGKHELGDGNNVVTALREACEETALPPNKVQLLGQLPIQTSKSGMSVRPIVALIAPD
LLLVPELGEISRIFWADFETLLTQPTVEYSIEYTLQDQAATLLTPSWQVDGETVWGLTGRVIASLLETGFDRQLEWYYRI
QDTRS

Sequences:

>Translated_245_residues
MLNPSQSVRFDEMTVAVPDFIRYPTIRKLAERVQHETLKAIASPALYDSHDHSRSARILNSLYQTPIADASILVAITHER
HPKLLLTRRAAHMNSHAGEVSCAGGKHELGDGNNVVTALREACEETALPPNKVQLLGQLPIQTSKSGMSVRPIVALIAPD
LLLVPELGEISRIFWADFETLLTQPTVEYSIEYTLQDQAATLLTPSWQVDGETVWGLTGRVIASLLETGFDRQLEWYYRI
QDTRS
>Mature_245_residues
MLNPSQSVRFDEMTVAVPDFIRYPTIRKLAERVQHETLKAIASPALYDSHDHSRSARILNSLYQTPIADASILVAITHER
HPKLLLTRRAAHMNSHAGEVSCAGGKHELGDGNNVVTALREACEETALPPNKVQLLGQLPIQTSKSGMSVRPIVALIAPD
LLLVPELGEISRIFWADFETLLTQPTVEYSIEYTLQDQAATLLTPSWQVDGETVWGLTGRVIASLLETGFDRQLEWYYRI
QDTRS

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788115, Length=156, Percent_Identity=35.2564102564103, Blast_Score=69, Evalue=4e-13,
Organism=Drosophila melanogaster, GI18859683, Length=155, Percent_Identity=30.3225806451613, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 27310; Mature: 27310

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNPSQSVRFDEMTVAVPDFIRYPTIRKLAERVQHETLKAIASPALYDSHDHSRSARILN
CCCCCCCCEECCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
SLYQTPIADASILVAITHERHPKLLLTRRAAHMNSHAGEVSCAGGKHELGDGNNVVTALR
HHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHH
EACEETALPPNKVQLLGQLPIQTSKSGMSVRPIVALIAPDLLLVPELGEISRIFWADFET
HHHHHHCCCCHHHHHEECCCCCCCCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHH
LLTQPTVEYSIEYTLQDQAATLLTPSWQVDGETVWGLTGRVIASLLETGFDRQLEWYYRI
HHCCCCEEEEEEEEECCCCCEEECCCEECCCCEEECHHHHHHHHHHHCCCCCCEEEEEEE
QDTRS
ECCCC
>Mature Secondary Structure
MLNPSQSVRFDEMTVAVPDFIRYPTIRKLAERVQHETLKAIASPALYDSHDHSRSARILN
CCCCCCCCEECCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
SLYQTPIADASILVAITHERHPKLLLTRRAAHMNSHAGEVSCAGGKHELGDGNNVVTALR
HHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHH
EACEETALPPNKVQLLGQLPIQTSKSGMSVRPIVALIAPDLLLVPELGEISRIFWADFET
HHHHHHCCCCHHHHHEECCCCCCCCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHH
LLTQPTVEYSIEYTLQDQAATLLTPSWQVDGETVWGLTGRVIASLLETGFDRQLEWYYRI
HHCCCCEEEEEEEEECCCCCEEECCCEECCCCEEECHHHHHHHHHHHCCCCCCEEEEEEE
QDTRS
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA