| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is ygfY [C]
Identifier: 93006842
GI number: 93006842
Start: 2481592
End: 2481873
Strand: Reverse
Name: ygfY [C]
Synonym: Pcryo_2018
Alternate gene names: 93006842
Gene position: 2481873-2481592 (Counterclockwise)
Preceding gene: 93006843
Following gene: 93006841
Centisome position: 81.11
GC content: 40.07
Gene sequence:
>282_bases ATGACCATTAATAACCAGCCAGAGCCAACTAATGAGCAGCGCCGTATTATTTATCAAGCCCGCCGTGGTTTGAAAGAGTT GGATTTTTATTTTGAACCCTATATTAAAGAGCTTTATTTAACGGCAGAAGCTGCCGAACAAGAAAGCTTTGCGCAAATGC TGACTCATGAAGACCCAGATTTATTAGATTATTTTACCAATCAAAGCCGACCAGAAGATGAGGCGATATGGGAGTTGGTT AATAAGATTAAGACGTGGCGTCACAGTAAAAGTCTGAGTTAA
Upstream 100 bases:
>100_bases ATGAGCAAAAATAGATTTATCGATGATAATAATTGTGAACGATAGAGTTTTGGTGCTTTATATTTATTTACATACCTTTT AAACGAATGAGAATACCTTT
Downstream 100 bases:
>100_bases TTGTTTAAATGGCTAGTTTTATTTTTTGATTGTTAAAGTAGTATTGAGTCTTTTCTATTAATAAGAAATATTCTTTGGTA GCTCACTATGACAGCATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MTINNQPEPTNEQRRIIYQARRGLKELDFYFEPYIKELYLTAEAAEQESFAQMLTHEDPDLLDYFTNQSRPEDEAIWELV NKIKTWRHSKSLS
Sequences:
>Translated_93_residues MTINNQPEPTNEQRRIIYQARRGLKELDFYFEPYIKELYLTAEAAEQESFAQMLTHEDPDLLDYFTNQSRPEDEAIWELV NKIKTWRHSKSLS >Mature_92_residues TINNQPEPTNEQRRIIYQARRGLKELDFYFEPYIKELYLTAEAAEQESFAQMLTHEDPDLLDYFTNQSRPEDEAIWELVN KIKTWRHSKSLS
Specific function: Unknown
COG id: COG2938
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0350 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005631 [H]
Pfam domain/function: PF03937 DUF339 [H]
EC number: NA
Molecular weight: Translated: 11182; Mature: 11050
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINNQPEPTNEQRRIIYQARRGLKELDFYFEPYIKELYLTAEAAEQESFAQMLTHEDPD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH LLDYFTNQSRPEDEAIWELVNKIKTWRHSKSLS HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TINNQPEPTNEQRRIIYQARRGLKELDFYFEPYIKELYLTAEAAEQESFAQMLTHEDPD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH LLDYFTNQSRPEDEAIWELVNKIKTWRHSKSLS HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA