Click here to switch to the map view.

The map label for this gene is 93006824

Identifier: 93006824

GI number: 93006824

Start: 2461059

End: 2461874

Strand: Reverse

Name: 93006824

Synonym: Pcryo_2000

Alternate gene names: NA

Gene position: 2461874-2461059 (Counterclockwise)

Preceding gene: 93006825

Following gene: 93006823

Centisome position: 80.46

GC content: 47.92

Gene sequence:

>816_bases
ATGTCAGCTTATTACACTTTTATAAAACGTGAGCAGCAAGCAGATGGTAGTAGTGTTGCTTATTATCAGCCAACGAAGCA
TGCGCAAGGCGCTTGGAACGAGCATGAGCAACATATGGCGCCAGCCACCGGCTTGCTCACTGCCGAATTACAAAGTTTTA
TACCACAAGAAAATATGCGCATTGCTCGTATCAGTTTAGATATTTTAGGGCTGATACCGCTTGATGATTTTATCGTGACT
ACGCGATGTATCCGTCCGGGTAGGACTATTGAGCTTATCGAAGCAGTGATGAGCAGTCGTGGTCGCGATGCCATCATTGC
GCGTGCATGGCGCTTGATTACTCAAGATACCAGTGTCATTGCAGGGCTTGAAGATCAAAAATCCATACATAAGCCTGAAG
CGTTACCCGCTTGGGATGGTATGAAAGGCTGGCCCGGCGGTTTCATTGAAAGCGTACGTTTGGTGGCTGAACCTAATCGC
CGTCCTGGTAAAGGTATGGTATGGATGACTAATGATATCGACATGGTAGAGGGTATGCCTACCCATGACATGGTGCATTT
ATTGGGTATGGCCGATACTGCCAATGGTGTTGTACCAAGGCTTGGACTGGGGATGGCAAAATTGGAATGGATGTTCCCCA
ATACTGATTTGCAAATTCATATGCATCGCGCGCCGCAAGGTCGCTGGCTTGGAATCGAAGCCGTGCAGCAATACGGTGCT
GATGGCATAGGAATTAGCAGCGCGATATTACATGATACGCAAGGACCTTTTGGTCGTAGTGAGCAAATTCTGACTATTCG
TCCCATGCCGCGCTAG

Upstream 100 bases:

>100_bases
TGCTGACGGTACAAAAGCAAGCCCTTATGCGCTAAACAAAGAAAGACTACCTTTCTTTTATACCTAATCAATCTATTTTA
AAAAGAATTCGAGGACATTC

Downstream 100 bases:

>100_bases
TGCAAAGATGTATCCAATAGGTAGTCATTGTTTGAGATCGCTCTATGAATGAAAAGCATTTGGATGAGTTAGACAATATT
TTGAGTAATTCTGAAAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSAYYTFIKREQQADGSSVAYYQPTKHAQGAWNEHEQHMAPATGLLTAELQSFIPQENMRIARISLDILGLIPLDDFIVT
TRCIRPGRTIELIEAVMSSRGRDAIIARAWRLITQDTSVIAGLEDQKSIHKPEALPAWDGMKGWPGGFIESVRLVAEPNR
RPGKGMVWMTNDIDMVEGMPTHDMVHLLGMADTANGVVPRLGLGMAKLEWMFPNTDLQIHMHRAPQGRWLGIEAVQQYGA
DGIGISSAILHDTQGPFGRSEQILTIRPMPR

Sequences:

>Translated_271_residues
MSAYYTFIKREQQADGSSVAYYQPTKHAQGAWNEHEQHMAPATGLLTAELQSFIPQENMRIARISLDILGLIPLDDFIVT
TRCIRPGRTIELIEAVMSSRGRDAIIARAWRLITQDTSVIAGLEDQKSIHKPEALPAWDGMKGWPGGFIESVRLVAEPNR
RPGKGMVWMTNDIDMVEGMPTHDMVHLLGMADTANGVVPRLGLGMAKLEWMFPNTDLQIHMHRAPQGRWLGIEAVQQYGA
DGIGISSAILHDTQGPFGRSEQILTIRPMPR
>Mature_270_residues
SAYYTFIKREQQADGSSVAYYQPTKHAQGAWNEHEQHMAPATGLLTAELQSFIPQENMRIARISLDILGLIPLDDFIVTT
RCIRPGRTIELIEAVMSSRGRDAIIARAWRLITQDTSVIAGLEDQKSIHKPEALPAWDGMKGWPGGFIESVRLVAEPNRR
PGKGMVWMTNDIDMVEGMPTHDMVHLLGMADTANGVVPRLGLGMAKLEWMFPNTDLQIHMHRAPQGRWLGIEAVQQYGAD
GIGISSAILHDTQGPFGRSEQILTIRPMPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30174; Mature: 30043

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYYTFIKREQQADGSSVAYYQPTKHAQGAWNEHEQHMAPATGLLTAELQSFIPQENMR
CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCE
IARISLDILGLIPLDDFIVTTRCIRPGRTIELIEAVMSSRGRDAIIARAWRLITQDTSVI
EEEEEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHE
AGLEDQKSIHKPEALPAWDGMKGWPGGFIESVRLVAEPNRRPGKGMVWMTNDIDMVEGMP
ECCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCEEEEECCCHHHCCCC
THDMVHLLGMADTANGVVPRLGLGMAKLEWMFPNTDLQIHMHRAPQGRWLGIEAVQQYGA
HHHHHHHHHCCCCCCCCCHHHCCCCEEEEEECCCCCEEEEEEECCCCCEECHHHHHHCCC
DGIGISSAILHDTQGPFGRSEQILTIRPMPR
CCCCCHHHHHCCCCCCCCCCCCEEEECCCCC
>Mature Secondary Structure 
SAYYTFIKREQQADGSSVAYYQPTKHAQGAWNEHEQHMAPATGLLTAELQSFIPQENMR
CCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCE
IARISLDILGLIPLDDFIVTTRCIRPGRTIELIEAVMSSRGRDAIIARAWRLITQDTSVI
EEEEEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHE
AGLEDQKSIHKPEALPAWDGMKGWPGGFIESVRLVAEPNRRPGKGMVWMTNDIDMVEGMP
ECCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCEEEEECCCHHHCCCC
THDMVHLLGMADTANGVVPRLGLGMAKLEWMFPNTDLQIHMHRAPQGRWLGIEAVQQYGA
HHHHHHHHHCCCCCCCCCHHHCCCCEEEEEECCCCCEEEEEEECCCCCEECHHHHHHCCC
DGIGISSAILHDTQGPFGRSEQILTIRPMPR
CCCCCHHHHHCCCCCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA