| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is yhiQ [C]
Identifier: 93006806
GI number: 93006806
Start: 2441597
End: 2442487
Strand: Reverse
Name: yhiQ [C]
Synonym: Pcryo_1982
Alternate gene names: 93006806
Gene position: 2442487-2441597 (Counterclockwise)
Preceding gene: 93006807
Following gene: 93006805
Centisome position: 79.82
GC content: 44.11
Gene sequence:
>891_bases ATGACCAATTTGAAGCAAGTGCTGACTGCTGATATAAGCTGCCAACTACTTTATGTTAATGAAACGCAGGCAAGTCAAGT CGAGAGTTTGCAGGCACTCATAGCTAAGCATAAGCTACCCATTATTTTGAATGCTGAACTGGTGACAGAGAAATTAAATC AAAAACGTCGCCAGCAGTTAAGTCAGATAGTTACCCAACCTATATTGCTGTTGGATGAAAAAGATAAACTTTCATGGTTG AGTGAGGGGTTAAGCGTTGCCCCCGAATGGGATAAACTGCAGCGGCGCGTAGTCAGTGCAGGGCGTAAGTCGGAGCTTTT ATTACAAGCAGCGAAATTGACCGCAGATAGTGAGGTCATTGATGCAACTGCTGGTTTTGGGCATGATAGTCTGATACTGG CGAGTACTGGTGCACAAGTTACCATGCTTGAGCAGCAGCCATTGATGGCGTTATTGTTACTTGTAGAGCAGCTGCGTATG AGTACGCTGCCAAATTGGCAAAAGCTGATGTCACGTTTGCAGATTATTAATACCGATGCGCTCACTTATTTTGCAAGGTT TAATAACTATCTAGGGAATGGTAACGAGCAAGCCATTGATGTGATATATCTTGACCCTATGTTTCCAGAAGACAGTTATC AAGATAGTAAGACGGGGAAGGGCGCGAAAGTCGGTAAGCATATGCAAGCGTTGCATCAATTAGCGCATCCGCCAACGTTA GATGAAGAGCAGCAATTACTACAATCTGCACAAGCCGTTGTCAGTCAAAACGGTCAAAAACAAGGTCGCGTCATCGTTAA GCGTCCACAATTTGCGCCGTCACTTGCTGATCAACAGCCAAGTGAAAGCTGGAATAATGAAGCAGTACGTTTTGACGGTT ATTTCGTTTAA
Upstream 100 bases:
>100_bases GCTTGGGGTTTTGGTTATCAGATGGCAGGCTAAACTTCATGATGGAATGGTTTTTAATAGAGATTCATGATGTTATAAGT ATTAAAAAGGAATGGCAGTC
Downstream 100 bases:
>100_bases TAATATCAAATAAGACAGCTTATAAATTTAGGAGCAGGGAATGTCTGTATTAATCATTTGGGTGATGGGTGCGGCGTTAT TGTTAATCAATATTATGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTNLKQVLTADISCQLLYVNETQASQVESLQALIAKHKLPIILNAELVTEKLNQKRRQQLSQIVTQPILLLDEKDKLSWL SEGLSVAPEWDKLQRRVVSAGRKSELLLQAAKLTADSEVIDATAGFGHDSLILASTGAQVTMLEQQPLMALLLLVEQLRM STLPNWQKLMSRLQIINTDALTYFARFNNYLGNGNEQAIDVIYLDPMFPEDSYQDSKTGKGAKVGKHMQALHQLAHPPTL DEEQQLLQSAQAVVSQNGQKQGRVIVKRPQFAPSLADQQPSESWNNEAVRFDGYFV
Sequences:
>Translated_296_residues MTNLKQVLTADISCQLLYVNETQASQVESLQALIAKHKLPIILNAELVTEKLNQKRRQQLSQIVTQPILLLDEKDKLSWL SEGLSVAPEWDKLQRRVVSAGRKSELLLQAAKLTADSEVIDATAGFGHDSLILASTGAQVTMLEQQPLMALLLLVEQLRM STLPNWQKLMSRLQIINTDALTYFARFNNYLGNGNEQAIDVIYLDPMFPEDSYQDSKTGKGAKVGKHMQALHQLAHPPTL DEEQQLLQSAQAVVSQNGQKQGRVIVKRPQFAPSLADQQPSESWNNEAVRFDGYFV >Mature_295_residues TNLKQVLTADISCQLLYVNETQASQVESLQALIAKHKLPIILNAELVTEKLNQKRRQQLSQIVTQPILLLDEKDKLSWLS EGLSVAPEWDKLQRRVVSAGRKSELLLQAAKLTADSEVIDATAGFGHDSLILASTGAQVTMLEQQPLMALLLLVEQLRMS TLPNWQKLMSRLQIINTDALTYFARFNNYLGNGNEQAIDVIYLDPMFPEDSYQDSKTGKGAKVGKHMQALHQLAHPPTLD EEQQLLQSAQAVVSQNGQKQGRVIVKRPQFAPSLADQQPSESWNNEAVRFDGYFV
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0341 family
Homologues:
Organism=Escherichia coli, GI1789912, Length=206, Percent_Identity=33.9805825242718, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1982_PSYCK (Q1Q994)
Other databases:
- EMBL: CP000323 - RefSeq: YP_581243.1 - ProteinModelPortal: Q1Q994 - SMR: Q1Q994 - STRING: Q1Q994 - GeneID: 4035079 - GenomeReviews: CP000323_GR - KEGG: pcr:Pcryo_1982 - NMPDR: fig|335284.3.peg.1577 - eggNOG: COG0500 - HOGENOM: HBG645154 - OMA: HDSLILA - PhylomeDB: Q1Q994 - ProtClustDB: CLSK839425 - BioCyc: PCRY335284:PCRYO_1982-MONOMER - HAMAP: MF_01523 - InterPro: IPR007536
Pfam domain/function: PF04445 DUF548
EC number: NA
Molecular weight: Translated: 33101; Mature: 32970
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLKQVLTADISCQLLYVNETQASQVESLQALIAKHKLPIILNAELVTEKLNQKRRQQL CCCHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHH SQIVTQPILLLDEKDKLSWLSEGLSVAPEWDKLQRRVVSAGRKSELLLQAAKLTADSEVI HHHHHCCCEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH DATAGFGHDSLILASTGAQVTMLEQQPLMALLLLVEQLRMSTLPNWQKLMSRLQIINTDA HHHCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHH LTYFARFNNYLGNGNEQAIDVIYLDPMFPEDSYQDSKTGKGAKVGKHMQALHQLAHPPTL HHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC DEEQQLLQSAQAVVSQNGQKQGRVIVKRPQFAPSLADQQPSESWNNEAVRFDGYFV CHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEC >Mature Secondary Structure TNLKQVLTADISCQLLYVNETQASQVESLQALIAKHKLPIILNAELVTEKLNQKRRQQL CCHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHH SQIVTQPILLLDEKDKLSWLSEGLSVAPEWDKLQRRVVSAGRKSELLLQAAKLTADSEVI HHHHHCCCEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH DATAGFGHDSLILASTGAQVTMLEQQPLMALLLLVEQLRMSTLPNWQKLMSRLQIINTDA HHHCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHH LTYFARFNNYLGNGNEQAIDVIYLDPMFPEDSYQDSKTGKGAKVGKHMQALHQLAHPPTL HHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC DEEQQLLQSAQAVVSQNGQKQGRVIVKRPQFAPSLADQQPSESWNNEAVRFDGYFV CHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA