| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006772
Identifier: 93006772
GI number: 93006772
Start: 2403342
End: 2405048
Strand: Reverse
Name: 93006772
Synonym: Pcryo_1948
Alternate gene names: NA
Gene position: 2405048-2403342 (Counterclockwise)
Preceding gene: 93006773
Following gene: 93006771
Centisome position: 78.6
GC content: 41.89
Gene sequence:
>1707_bases ATGGTAAATTTATCGACGTTTCAAACGTATTTAGCGGCTGAACCCCCTTTGTTAGAAGCTTGCAATAAGTCTAAGAGTAG CAATGAGCCTCACTTGCATAAATGGGCGGCACTATTGCCAGCGCAAACAGAGGCCCAGCAAGTCGAACAAATAGAAAAAG TATTAACAGAATTGCGTCTGATTCCTACTGATGATAGGCAGCGTTTAAGATTGATTAAGATTGTCACTAATGCCGCCAGT CAGCTAATTGCGGCGCTACGCCAACCGTACATTTATGAGACAGGGGCGCTCAATGAAGCTCAGCTTGGCTATGTTGCTCG GGTTAAGTCGCTGTACTATTCATTGATTATGACCTATGACGGCGTGATACGCCGCGAAACTACCCTTTCAAAGGATAAGC AGCAAGCACCTTCAAGTAATCTGTTGCAGCGCTATTTTACCAGTGAAAAATCATCTCCTGTTACCTTGGCGATTGCCACT TACCAAACGCTACTGATGTATCAAAAACTGCTATTTGAAGATGGCTTTTGCTATCAAAAGTCGCCAGCCTATATATGGGC CAATGTAAATAACTTATATCTTAACGCATGCCAGCAGCGAGCCTCACATATCGTACTGATTGCTTACATTCCAGCGCAGC AAGGTGATACTATCCATCATTTATATTGCCAAATATGCTTGCATGAGTTGCTAAATGTACGTGCACTGCGTCGACCTCAT ATCTTACTGCTACAGCGTCTGCTGCCAGCGTGGAGTGCACATATAGTTGCTACCATAGAGCCGCGCACAGCAACGCGAGT GTTCGTCAATCTACAGAGTAAAGAGCCGCCTACTTATTTAACTGCATTATCTACTATCAACCCATATGATGCTCATCACA CCTGCTTATTTATAGAGCTTGAACCTTTAGTGACGTATTTACAATCGCGTATGAAAACCTTAATCGATACTGATCGAAGA GGGGTTGAATATTTTTTGATTAATACCGTTTCAATGGCGATAAGATATCGTTATATTCAACCAAAGCGCATGCCTCCTAT TGATCATAATACAAAGCAGACGGCGACGATAATATCGGGTTTTAATGAAATACATTACCGTATCAGTAACGGTGAAGCTT TCAGCAGTTTAATAGCATCTAAAAATCTGCCCGAGTATCAGCAGCCGCGTTATGATACCTTACCAAAAAATAATGCTGCC CATAAAGAATCATTAGCGGAAATATTTGAGGGTAATAATCAGTTGTCACACTTTCGTACCCTACGCTTGTTTCTAGATTC ATCTGAGACAATTGATAAAATTGATGATCTCACTTCCATCGCACCACCTTTACAAATAATGAGCCTTTTTTTACTATGTC GCAAAGATAAGGCTACCGCGTCTAAATGGTCCATGGGAGTGGTGCGTTGGCTTAATTTGGATAGCGCAAAACTCGAGCTT GAATGGCAAATCCTTGGTCATAAGATAATCGCCTGTGGAATTTGTCTACAAGATAGACAGAATCGCAGTCAGCATTTTGT GCCAGCGTTTGTCATCGGAGCTGATGAACACCTACAAACGTCTTATAGTCTATTATTGCCGACCTCTCATTTTCAAACAG ATGATAAGGTTATCATGCGTATTAATGACCAACAGAAATCTTTGCGCTTGGGTCGTAGTCTAATGGTGACTGATGAATTT AGCCAATATGAAGGGGTGCAGGGTTAA
Upstream 100 bases:
>100_bases AACATATATAGAAGAATGGTTAGGTATGATAGCAATATTCTTTTTTAAGAATATATCCTTCTACACTCATGGATAACTTA CGCAATTACTAAGGATGGTA
Downstream 100 bases:
>100_bases TGACGTTAATCTACATAAAAGCCGGCCTCTAAAGACCTAGTTAGTCGTGTCATATAAAATTGCTGTGTCGAATTATTTAA CAATTACCATGATAAGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MVNLSTFQTYLAAEPPLLEACNKSKSSNEPHLHKWAALLPAQTEAQQVEQIEKVLTELRLIPTDDRQRLRLIKIVTNAAS QLIAALRQPYIYETGALNEAQLGYVARVKSLYYSLIMTYDGVIRRETTLSKDKQQAPSSNLLQRYFTSEKSSPVTLAIAT YQTLLMYQKLLFEDGFCYQKSPAYIWANVNNLYLNACQQRASHIVLIAYIPAQQGDTIHHLYCQICLHELLNVRALRRPH ILLLQRLLPAWSAHIVATIEPRTATRVFVNLQSKEPPTYLTALSTINPYDAHHTCLFIELEPLVTYLQSRMKTLIDTDRR GVEYFLINTVSMAIRYRYIQPKRMPPIDHNTKQTATIISGFNEIHYRISNGEAFSSLIASKNLPEYQQPRYDTLPKNNAA HKESLAEIFEGNNQLSHFRTLRLFLDSSETIDKIDDLTSIAPPLQIMSLFLLCRKDKATASKWSMGVVRWLNLDSAKLEL EWQILGHKIIACGICLQDRQNRSQHFVPAFVIGADEHLQTSYSLLLPTSHFQTDDKVIMRINDQQKSLRLGRSLMVTDEF SQYEGVQG
Sequences:
>Translated_568_residues MVNLSTFQTYLAAEPPLLEACNKSKSSNEPHLHKWAALLPAQTEAQQVEQIEKVLTELRLIPTDDRQRLRLIKIVTNAAS QLIAALRQPYIYETGALNEAQLGYVARVKSLYYSLIMTYDGVIRRETTLSKDKQQAPSSNLLQRYFTSEKSSPVTLAIAT YQTLLMYQKLLFEDGFCYQKSPAYIWANVNNLYLNACQQRASHIVLIAYIPAQQGDTIHHLYCQICLHELLNVRALRRPH ILLLQRLLPAWSAHIVATIEPRTATRVFVNLQSKEPPTYLTALSTINPYDAHHTCLFIELEPLVTYLQSRMKTLIDTDRR GVEYFLINTVSMAIRYRYIQPKRMPPIDHNTKQTATIISGFNEIHYRISNGEAFSSLIASKNLPEYQQPRYDTLPKNNAA HKESLAEIFEGNNQLSHFRTLRLFLDSSETIDKIDDLTSIAPPLQIMSLFLLCRKDKATASKWSMGVVRWLNLDSAKLEL EWQILGHKIIACGICLQDRQNRSQHFVPAFVIGADEHLQTSYSLLLPTSHFQTDDKVIMRINDQQKSLRLGRSLMVTDEF SQYEGVQG >Mature_568_residues MVNLSTFQTYLAAEPPLLEACNKSKSSNEPHLHKWAALLPAQTEAQQVEQIEKVLTELRLIPTDDRQRLRLIKIVTNAAS QLIAALRQPYIYETGALNEAQLGYVARVKSLYYSLIMTYDGVIRRETTLSKDKQQAPSSNLLQRYFTSEKSSPVTLAIAT YQTLLMYQKLLFEDGFCYQKSPAYIWANVNNLYLNACQQRASHIVLIAYIPAQQGDTIHHLYCQICLHELLNVRALRRPH ILLLQRLLPAWSAHIVATIEPRTATRVFVNLQSKEPPTYLTALSTINPYDAHHTCLFIELEPLVTYLQSRMKTLIDTDRR GVEYFLINTVSMAIRYRYIQPKRMPPIDHNTKQTATIISGFNEIHYRISNGEAFSSLIASKNLPEYQQPRYDTLPKNNAA HKESLAEIFEGNNQLSHFRTLRLFLDSSETIDKIDDLTSIAPPLQIMSLFLLCRKDKATASKWSMGVVRWLNLDSAKLEL EWQILGHKIIACGICLQDRQNRSQHFVPAFVIGADEHLQTSYSLLLPTSHFQTDDKVIMRINDQQKSLRLGRSLMVTDEF SQYEGVQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65027; Mature: 65027
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNLSTFQTYLAAEPPLLEACNKSKSSNEPHLHKWAALLPAQTEAQQVEQIEKVLTELRL CCCHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC IPTDDRQRLRLIKIVTNAASQLIAALRQPYIYETGALNEAQLGYVARVKSLYYSLIMTYD CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHC GVIRRETTLSKDKQQAPSSNLLQRYFTSEKSSPVTLAIATYQTLLMYQKLLFEDGFCYQK CHHHHHHHHCCHHHHCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEC SPAYIWANVNNLYLNACQQRASHIVLIAYIPAQQGDTIHHLYCQICLHELLNVRALRRPH CCCEEEEECCHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCH ILLLQRLLPAWSAHIVATIEPRTATRVFVNLQSKEPPTYLTALSTINPYDAHHTCLFIEL HHHHHHHHHHCCCEEEEEECCCCEEEEEEEEECCCCCHHEEHHHCCCCCCCCCEEEEEEH EPLVTYLQSRMKTLIDTDRRGVEYFLINTVSMAIRYRYIQPKRMPPIDHNTKQTATIISG HHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHC FNEIHYRISNGEAFSSLIASKNLPEYQQPRYDTLPKNNAAHKESLAEIFEGNNQLSHFRT CCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHE LRLFLDSSETIDKIDDLTSIAPPLQIMSLFLLCRKDKATASKWSMGVVRWLNLDSAKLEL EHHEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCEEEE EWQILGHKIIACGICLQDRQNRSQHFVPAFVIGADEHLQTSYSLLLPTSHFQTDDKVIMR EEEECCCEEEHEEEEHHCCCCCCCCCCEEEEECCCHHHHCCEEEEECCCCCCCCCEEEEE INDQQKSLRLGRSLMVTDEFSQYEGVQG ECCHHHHHHHCCEEEEECCHHHCCCCCC >Mature Secondary Structure MVNLSTFQTYLAAEPPLLEACNKSKSSNEPHLHKWAALLPAQTEAQQVEQIEKVLTELRL CCCHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC IPTDDRQRLRLIKIVTNAASQLIAALRQPYIYETGALNEAQLGYVARVKSLYYSLIMTYD CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHC GVIRRETTLSKDKQQAPSSNLLQRYFTSEKSSPVTLAIATYQTLLMYQKLLFEDGFCYQK CHHHHHHHHCCHHHHCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEC SPAYIWANVNNLYLNACQQRASHIVLIAYIPAQQGDTIHHLYCQICLHELLNVRALRRPH CCCEEEEECCHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCH ILLLQRLLPAWSAHIVATIEPRTATRVFVNLQSKEPPTYLTALSTINPYDAHHTCLFIEL HHHHHHHHHHCCCEEEEEECCCCEEEEEEEEECCCCCHHEEHHHCCCCCCCCCEEEEEEH EPLVTYLQSRMKTLIDTDRRGVEYFLINTVSMAIRYRYIQPKRMPPIDHNTKQTATIISG HHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHC FNEIHYRISNGEAFSSLIASKNLPEYQQPRYDTLPKNNAAHKESLAEIFEGNNQLSHFRT CCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHE LRLFLDSSETIDKIDDLTSIAPPLQIMSLFLLCRKDKATASKWSMGVVRWLNLDSAKLEL EHHEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCEEEE EWQILGHKIIACGICLQDRQNRSQHFVPAFVIGADEHLQTSYSLLLPTSHFQTDDKVIMR EEEECCCEEEHEEEEHHCCCCCCCCCCEEEEECCCHHHHCCEEEEECCCCCCCCCEEEEE INDQQKSLRLGRSLMVTDEFSQYEGVQG ECCHHHHHHHCCEEEEECCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA