| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is yebA [H]
Identifier: 93006767
GI number: 93006767
Start: 2395836
End: 2398139
Strand: Reverse
Name: yebA [H]
Synonym: Pcryo_1943
Alternate gene names: 93006767
Gene position: 2398139-2395836 (Counterclockwise)
Preceding gene: 93006768
Following gene: 93006766
Centisome position: 78.37
GC content: 46.31
Gene sequence:
>2304_bases ATGAACAATTCTAAACGATCTTCCTCAAATGACATTGAAAATGTATCGATCGATTTTCTTACTAAAAATTCTACAGAGAC AGCCATTTTTGAGCAATTGGCAACGGGTCAAAGCACCCGCGCTAGTGTTGACCACGGTTACGCTAGAAAATGGTATCGCA ATTTTTTAGCGCTACCAGCCTATTATTGGGTATTAATTGCCCAAGTCATTGTTATCTTACCTCATGCGGCACACTTACCA TTATGGCTAATGGGTTTTGCTGTCGTCAGTATTATTGCCCAATTGCCACGCATCAAAGTGCGTTTTAAAAAAATAGCATA TTTAAAACGCGTCTATCAAGGCATGCAAATGCTTGGCTTCTTATTGGGGCTGGCAGGATTGTGGCTGACCTACAATACTG CATTTGGACTGGATATGGGTGTGGCATTTTTAGTGCTCTGCCTTATCAGTAAACTGTGGGAGCTTTACAAGCGCCGCGAT GCTTATGTGGTGTTGAATTTATCATTGTTTGTACTTGCAGCGTTGTTTTTGATGGATCAAGGGTTAATAACGACTTTAGA AGTGATTTGTGGCATGATTGTTGTGTTGTTGGCATTTATCGCGCTAAATGATGATGGTAATAGTCGCGGTGATGGTCGTC TGCGCACCTTGGGTGTATTGGGCATTGGAGCATTGCCATTATTGGTGGTGCTGTTTCTATTCTTTCCGCGTTTGCCCCCA CTGTGGTCAGTACAGTTATCAGGGCAGCAAGCGACCACAGGCGTCTCTGATAGTATGTCGCCAGGTGATTTTGCTAATTT AGGTCAGTCAACCGAATTGGCTTTTCGGGTAGAGTTTACAGACAATCGACCCCCGCAGCAGGAGTTGTATTGGCGAGGCT TGGTATTTAGCGATTTTGATGGCATTACTTGGCGTCAAAGCCCTCAGCAGCGAGCATGGAAGCCTACGTTACCTATACCT ACTTGGATTAAAAATGCATTTTCGACTGTTCCTGATGCGGTGAAAGCTGCCCCCAACACTTATCAGATTATCTTAGAACC TACTCAGCAGAACTGGTTATTTGGACTCGATTATCCGTTTACCCAGCAGCAAGATGTCAGTGTCACCTCAGACTTTACCT TGTTAAAAGACCAGCCTGTCACGCAGCAGCTGCGCTACGATGTAGCACAGTTTACGCCGATGCAGATTGACCCTATACTC ACTGACGAGGTGCGACGACTAAATCTTGCCTTGCCTAATAAAGGCAACCCACAAGCACGAGCATTAGCCCAGCAGCTTTT TGTCCAGTCAGGCTCAGATCCTCTACGCTATATGGCAGCTATTGAGCGCTGGATTAACCAAACGGAATTTCGCTATACGC TATCGCCGCCACGCTTGAATAATAATCGTATTGATGAGTTTTTATTTGAGACCAAAGCGGGATTCTGTGAGCATTATTCT TCCAGCTTTACCTTTATGATGCGGGCAGCTGGCATACCTGCACGGGTCGTGGCAGGCTATCAAGGTGGCGAGCTAAGCCG CGGCGGCAATGTTTGGGAGGTGCGACAAAAGGATGCACACGCTTGGACGGAAGTTTGGCTTGAGGGTCAAGGCTGGGTAC GTGTCGATCCGACAGCTTTTGTTGCGCCTGAGCGCGTCGAGCAAGGCATGGATGCGCTGACGCAGTCGCAAGGAGCAGCG ATATTCGGCGATGGCGCTGGCGCGCAAATCAGCTATCAGCAGTATCAAATGCTACAAACCTTACGCCGCCTCTCAGATCA AGCCAGTTACTATTGGCAAAAAGACGTCGTTGGTTACGATCAGGACAAGCAAGCGGACTCACTACTCAAATGGTTTAACA TCCGCTCAGTGATGCAGCAAATTATTTGGTTGGCAGTGAGTGCTATTACCGTCATGGTAATTCTCGTTTTTGTCATTTGG CAACGCCGCCGCAAGCGCTGGCATCCAGCAGATCTGCCACTTGCACAGCTATCAAAACGTATTGGCAAGAATAATAAAAC GTTGGCTAGGTTTGAGAGTGAAGGGCAATTGGCATGGCTTGAACGCTTGGCAATGTCACTTGATACAAGTGCTCGTCCAA AACCTGAAGCAAACACAGGGACAAATACTCAGAGTAGTAGTCCTAGTCAGTTGGTAGACAGCAATGCTTTAACAGTGGCT CAAATGAAAATCGAGCAGATTAAACAGGATTATCGTCAGCTGCGTTATGGGCGTTTGAGCACGATAGATATGAGTAATAA TGAGTACCAGCAAGTACTTAAGCAGCTAAAGAAAGACGTAAGGGAATTACCAAGGTTATACTGA
Upstream 100 bases:
>100_bases GCTTACCAAATGAGGCACCGTCTGAATTTTCCTCTGCGGTAATGACGGGCGAGGGCGACAGCTTTGCACAAGCTTGCTTA CTAAGATTGGCAAAAGCGCC
Downstream 100 bases:
>100_bases TTTGTGTGTGGTAGATGCACTAGAGTAAAAGTACTTAAATTATTTTAAAGCAATAAATAAAGGGATAGCCTTATGGCGAT ATACGTGGATTTTATGCAGA
Product: transglutaminase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 767; Mature: 767
Protein sequence:
>767_residues MNNSKRSSSNDIENVSIDFLTKNSTETAIFEQLATGQSTRASVDHGYARKWYRNFLALPAYYWVLIAQVIVILPHAAHLP LWLMGFAVVSIIAQLPRIKVRFKKIAYLKRVYQGMQMLGFLLGLAGLWLTYNTAFGLDMGVAFLVLCLISKLWELYKRRD AYVVLNLSLFVLAALFLMDQGLITTLEVICGMIVVLLAFIALNDDGNSRGDGRLRTLGVLGIGALPLLVVLFLFFPRLPP LWSVQLSGQQATTGVSDSMSPGDFANLGQSTELAFRVEFTDNRPPQQELYWRGLVFSDFDGITWRQSPQQRAWKPTLPIP TWIKNAFSTVPDAVKAAPNTYQIILEPTQQNWLFGLDYPFTQQQDVSVTSDFTLLKDQPVTQQLRYDVAQFTPMQIDPIL TDEVRRLNLALPNKGNPQARALAQQLFVQSGSDPLRYMAAIERWINQTEFRYTLSPPRLNNNRIDEFLFETKAGFCEHYS SSFTFMMRAAGIPARVVAGYQGGELSRGGNVWEVRQKDAHAWTEVWLEGQGWVRVDPTAFVAPERVEQGMDALTQSQGAA IFGDGAGAQISYQQYQMLQTLRRLSDQASYYWQKDVVGYDQDKQADSLLKWFNIRSVMQQIIWLAVSAITVMVILVFVIW QRRRKRWHPADLPLAQLSKRIGKNNKTLARFESEGQLAWLERLAMSLDTSARPKPEANTGTNTQSSSPSQLVDSNALTVA QMKIEQIKQDYRQLRYGRLSTIDMSNNEYQQVLKQLKKDVRELPRLY
Sequences:
>Translated_767_residues MNNSKRSSSNDIENVSIDFLTKNSTETAIFEQLATGQSTRASVDHGYARKWYRNFLALPAYYWVLIAQVIVILPHAAHLP LWLMGFAVVSIIAQLPRIKVRFKKIAYLKRVYQGMQMLGFLLGLAGLWLTYNTAFGLDMGVAFLVLCLISKLWELYKRRD AYVVLNLSLFVLAALFLMDQGLITTLEVICGMIVVLLAFIALNDDGNSRGDGRLRTLGVLGIGALPLLVVLFLFFPRLPP LWSVQLSGQQATTGVSDSMSPGDFANLGQSTELAFRVEFTDNRPPQQELYWRGLVFSDFDGITWRQSPQQRAWKPTLPIP TWIKNAFSTVPDAVKAAPNTYQIILEPTQQNWLFGLDYPFTQQQDVSVTSDFTLLKDQPVTQQLRYDVAQFTPMQIDPIL TDEVRRLNLALPNKGNPQARALAQQLFVQSGSDPLRYMAAIERWINQTEFRYTLSPPRLNNNRIDEFLFETKAGFCEHYS SSFTFMMRAAGIPARVVAGYQGGELSRGGNVWEVRQKDAHAWTEVWLEGQGWVRVDPTAFVAPERVEQGMDALTQSQGAA IFGDGAGAQISYQQYQMLQTLRRLSDQASYYWQKDVVGYDQDKQADSLLKWFNIRSVMQQIIWLAVSAITVMVILVFVIW QRRRKRWHPADLPLAQLSKRIGKNNKTLARFESEGQLAWLERLAMSLDTSARPKPEANTGTNTQSSSPSQLVDSNALTVA QMKIEQIKQDYRQLRYGRLSTIDMSNNEYQQVLKQLKKDVRELPRLY >Mature_767_residues MNNSKRSSSNDIENVSIDFLTKNSTETAIFEQLATGQSTRASVDHGYARKWYRNFLALPAYYWVLIAQVIVILPHAAHLP LWLMGFAVVSIIAQLPRIKVRFKKIAYLKRVYQGMQMLGFLLGLAGLWLTYNTAFGLDMGVAFLVLCLISKLWELYKRRD AYVVLNLSLFVLAALFLMDQGLITTLEVICGMIVVLLAFIALNDDGNSRGDGRLRTLGVLGIGALPLLVVLFLFFPRLPP LWSVQLSGQQATTGVSDSMSPGDFANLGQSTELAFRVEFTDNRPPQQELYWRGLVFSDFDGITWRQSPQQRAWKPTLPIP TWIKNAFSTVPDAVKAAPNTYQIILEPTQQNWLFGLDYPFTQQQDVSVTSDFTLLKDQPVTQQLRYDVAQFTPMQIDPIL TDEVRRLNLALPNKGNPQARALAQQLFVQSGSDPLRYMAAIERWINQTEFRYTLSPPRLNNNRIDEFLFETKAGFCEHYS SSFTFMMRAAGIPARVVAGYQGGELSRGGNVWEVRQKDAHAWTEVWLEGQGWVRVDPTAFVAPERVEQGMDALTQSQGAA IFGDGAGAQISYQQYQMLQTLRRLSDQASYYWQKDVVGYDQDKQADSLLKWFNIRSVMQQIIWLAVSAITVMVILVFVIW QRRRKRWHPADLPLAQLSKRIGKNNKTLARFESEGQLAWLERLAMSLDTSARPKPEANTGTNTQSSSPSQLVDSNALTVA QMKIEQIKQDYRQLRYGRLSTIDMSNNEYQQVLKQLKKDVRELPRLY
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002931 [H]
Pfam domain/function: PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 87154; Mature: 87154
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNSKRSSSNDIENVSIDFLTKNSTETAIFEQLATGQSTRASVDHGYARKWYRNFLALPA CCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH YYWVLIAQVIVILPHAAHLPLWLMGFAVVSIIAQLPRIKVRFKKIAYLKRVYQGMQMLGF HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LLGLAGLWLTYNTAFGLDMGVAFLVLCLISKLWELYKRRDAYVVLNLSLFVLAALFLMDQ HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCC GLITTLEVICGMIVVLLAFIALNDDGNSRGDGRLRTLGVLGIGALPLLVVLFLFFPRLPP CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCC LWSVQLSGQQATTGVSDSMSPGDFANLGQSTELAFRVEFTDNRPPQQELYWRGLVFSDFD CEEEEECCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEECCCCCCHHHHHHCCCEEECCC GITWRQSPQQRAWKPTLPIPTWIKNAFSTVPDAVKAAPNTYQIILEPTQQNWLFGLDYPF CCCCCCCCHHCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCEEEEEEECCCCCEEECCCCC TQQQDVSVTSDFTLLKDQPVTQQLRYDVAQFTPMQIDPILTDEVRRLNLALPNKGNPQAR CCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEECCCCCCHHHH ALAQQLFVQSGSDPLRYMAAIERWINQTEFRYTLSPPRLNNNRIDEFLFETKAGFCEHYS HHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC SSFTFMMRAAGIPARVVAGYQGGELSRGGNVWEVRQKDAHAWTEVWLEGQGWVRVDPTAF CHHHHHHHHCCCCHHHEECCCCCCCCCCCCEEEEHHHHHHHHHHHEECCCCEEEECCCCC VAPERVEQGMDALTQSQGAAIFGDGAGAQISYQQYQMLQTLRRLSDQASYYWQKDVVGYD CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QDKQADSLLKWFNIRSVMQQIIWLAVSAITVMVILVFVIWQRRRKRWHPADLPLAQLSKR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH IGKNNKTLARFESEGQLAWLERLAMSLDTSARPKPEANTGTNTQSSSPSQLVDSNALTVA HCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHH QMKIEQIKQDYRQLRYGRLSTIDMSNNEYQQVLKQLKKDVRELPRLY HHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNNSKRSSSNDIENVSIDFLTKNSTETAIFEQLATGQSTRASVDHGYARKWYRNFLALPA CCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH YYWVLIAQVIVILPHAAHLPLWLMGFAVVSIIAQLPRIKVRFKKIAYLKRVYQGMQMLGF HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LLGLAGLWLTYNTAFGLDMGVAFLVLCLISKLWELYKRRDAYVVLNLSLFVLAALFLMDQ HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCC GLITTLEVICGMIVVLLAFIALNDDGNSRGDGRLRTLGVLGIGALPLLVVLFLFFPRLPP CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCC LWSVQLSGQQATTGVSDSMSPGDFANLGQSTELAFRVEFTDNRPPQQELYWRGLVFSDFD CEEEEECCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEECCCCCCHHHHHHCCCEEECCC GITWRQSPQQRAWKPTLPIPTWIKNAFSTVPDAVKAAPNTYQIILEPTQQNWLFGLDYPF CCCCCCCCHHCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCEEEEEEECCCCCEEECCCCC TQQQDVSVTSDFTLLKDQPVTQQLRYDVAQFTPMQIDPILTDEVRRLNLALPNKGNPQAR CCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEECCCCCCHHHH ALAQQLFVQSGSDPLRYMAAIERWINQTEFRYTLSPPRLNNNRIDEFLFETKAGFCEHYS HHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC SSFTFMMRAAGIPARVVAGYQGGELSRGGNVWEVRQKDAHAWTEVWLEGQGWVRVDPTAF CHHHHHHHHCCCCHHHEECCCCCCCCCCCCEEEEHHHHHHHHHHHEECCCCEEEECCCCC VAPERVEQGMDALTQSQGAAIFGDGAGAQISYQQYQMLQTLRRLSDQASYYWQKDVVGYD CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QDKQADSLLKWFNIRSVMQQIIWLAVSAITVMVILVFVIWQRRRKRWHPADLPLAQLSKR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH IGKNNKTLARFESEGQLAWLERLAMSLDTSARPKPEANTGTNTQSSSPSQLVDSNALTVA HCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHH QMKIEQIKQDYRQLRYGRLSTIDMSNNEYQQVLKQLKKDVRELPRLY HHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]