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The map label for this gene is yecS [C]

Identifier: 93006751

GI number: 93006751

Start: 2377889

End: 2378626

Strand: Reverse

Name: yecS [C]

Synonym: Pcryo_1927

Alternate gene names: 93006751

Gene position: 2378626-2377889 (Counterclockwise)

Preceding gene: 93006752

Following gene: 93006750

Centisome position: 77.74

GC content: 45.93

Gene sequence:

>738_bases
ATGCTAGCTTCTATAACGTCAGTGTTAGCAGATTTATTGGCATTATTGCCGTTTATGAGTCCTGATCGGGCGCAGATTGT
TATCTCGTCTTTTTGGCCGATGCTTAAAGGCGGTATCTATTATTCGATACCGCTGGCATTGATATCGTTTGCGATCGGTA
TGGCAATTGCGCTGACCGTGGCACTGATTCGTATCGTGCCGCGTGCTGGTTGGGTTCATGAGATTGTCTATAGACTTGCT
CGCATCTATGTGTCTGCCATTCGCGGCACGCCGATGCTAGTACAGCTATTTATTATCTTTTATGGGTTACCGAGTGTTGG
GGTCAAGCTTGATCCTTTTCCGTCAGCGATCATCGCTTTTTCGCTCAATATTGGTGCTTATGCGTCAGAGACGGTGCGCG
CATCCATTTTGTCTATTCCAAAAGGACAGTGGGAAGCTGGTTCGACTGTCGGCTTGACGTATTTGCAGACCTTTCGTCAT
GTTATTTTGCCGCAGGCACTACGCGTATCCGTACCGCCGCTATCTAATACCTTTATCAGTCTGGTAAAAGATACTTCGCT
AGCATCGCTCGTATTGGTGACTGAGCTGTTTAAACAAGCACAGATTATCACCGCGCGTAACTATGAGTTTATGTTGGTCT
ATATCGAAGCGGCCGTTATCTATTGGGGTATTTGTCTGTTTTTGACCTTTATCCAAGGTAGGCTTGAAACGCGTCTTGAT
CGTTATGTTGCCAAATAA

Upstream 100 bases:

>100_bases
TGGCAAAATTAGACGAAGCCATGGCAGCATTGGCCGCTGATGGAACGCTCACCAAACTGAGCCAAGAATTCTTTGGTGCT
GATATAAGTCAACAAAAATA

Downstream 100 bases:

>100_bases
TATCGCTATCAACCCATGATATATTTCTCGCCCCTTTAACCCATGTGTTTTTTAATTTGCAAGTGGACGTCTTATGATTC
AAGTCACCAATATTCATAAA

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLASITSVLADLLALLPFMSPDRAQIVISSFWPMLKGGIYYSIPLALISFAIGMAIALTVALIRIVPRAGWVHEIVYRLA
RIYVSAIRGTPMLVQLFIIFYGLPSVGVKLDPFPSAIIAFSLNIGAYASETVRASILSIPKGQWEAGSTVGLTYLQTFRH
VILPQALRVSVPPLSNTFISLVKDTSLASLVLVTELFKQAQIITARNYEFMLVYIEAAVIYWGICLFLTFIQGRLETRLD
RYVAK

Sequences:

>Translated_245_residues
MLASITSVLADLLALLPFMSPDRAQIVISSFWPMLKGGIYYSIPLALISFAIGMAIALTVALIRIVPRAGWVHEIVYRLA
RIYVSAIRGTPMLVQLFIIFYGLPSVGVKLDPFPSAIIAFSLNIGAYASETVRASILSIPKGQWEAGSTVGLTYLQTFRH
VILPQALRVSVPPLSNTFISLVKDTSLASLVLVTELFKQAQIITARNYEFMLVYIEAAVIYWGICLFLTFIQGRLETRLD
RYVAK
>Mature_245_residues
MLASITSVLADLLALLPFMSPDRAQIVISSFWPMLKGGIYYSIPLALISFAIGMAIALTVALIRIVPRAGWVHEIVYRLA
RIYVSAIRGTPMLVQLFIIFYGLPSVGVKLDPFPSAIIAFSLNIGAYASETVRASILSIPKGQWEAGSTVGLTYLQTFRH
VILPQALRVSVPPLSNTFISLVKDTSLASLVLVTELFKQAQIITARNYEFMLVYIEAAVIYWGICLFLTFIQGRLETRLD
RYVAK

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=217, Percent_Identity=50.2304147465438, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1787030, Length=217, Percent_Identity=37.7880184331797, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1787087, Length=239, Percent_Identity=32.2175732217573, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI87082239, Length=208, Percent_Identity=33.1730769230769, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1787086, Length=222, Percent_Identity=30.6306306306306, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1788646, Length=164, Percent_Identity=32.9268292682927, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786874, Length=176, Percent_Identity=30.6818181818182, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788645, Length=216, Percent_Identity=31.0185185185185, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1786873, Length=214, Percent_Identity=29.9065420560748, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI48994930, Length=152, Percent_Identity=34.2105263157895, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27104; Mature: 27104

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLASITSVLADLLALLPFMSPDRAQIVISSFWPMLKGGIYYSIPLALISFAIGMAIALTV
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ALIRIVPRAGWVHEIVYRLARIYVSAIRGTPMLVQLFIIFYGLPSVGVKLDPFPSAIIAF
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCCCHHEE
SLNIGAYASETVRASILSIPKGQWEAGSTVGLTYLQTFRHVILPQALRVSVPPLSNTFIS
EECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHEECCCCHHHHHH
LVKDTSLASLVLVTELFKQAQIITARNYEFMLVYIEAAVIYWGICLFLTFIQGRLETRLD
HHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYVAK
HHHCC
>Mature Secondary Structure
MLASITSVLADLLALLPFMSPDRAQIVISSFWPMLKGGIYYSIPLALISFAIGMAIALTV
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ALIRIVPRAGWVHEIVYRLARIYVSAIRGTPMLVQLFIIFYGLPSVGVKLDPFPSAIIAF
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCCCHHEE
SLNIGAYASETVRASILSIPKGQWEAGSTVGLTYLQTFRHVILPQALRVSVPPLSNTFIS
EECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHEECCCCHHHHHH
LVKDTSLASLVLVTELFKQAQIITARNYEFMLVYIEAAVIYWGICLFLTFIQGRLETRLD
HHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYVAK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]