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The map label for this gene is 93006722

Identifier: 93006722

GI number: 93006722

Start: 2342621

End: 2343982

Strand: Reverse

Name: 93006722

Synonym: Pcryo_1898

Alternate gene names: NA

Gene position: 2343982-2342621 (Counterclockwise)

Preceding gene: 93006725

Following gene: 93006721

Centisome position: 76.6

GC content: 45.08

Gene sequence:

>1362_bases
ATGACCATTAATGCGGTACTACTGGCAGTTGTCATCATGCTAGGGTTGTCACTAGCGCGAGTGCACGTCGTGCTCAGTTT
GTTAATCGGTGCGCTGGCAGGTGGACTCATCGCTGGTCTCGGTATGACTGATACCTTGAACGCCTTTCAAGAAGGGATTA
AAAACGGCGCACAAATCGCGCTGTCTTATGCGCTGTTAGGTGCGTTTGCAGTAGCAATTGCGCATTCCGGCTTGCCACAA
TCTTTGGCAGGGGCAGTGATTAAGCGCATTGATGCAGGCGGCACCAGTGGCATGATTAAATACATGCTGTTTGCAGGTCT
TGTCACTATGAGCTGCTTTAGTCAAAACTTAATCCCCATTCATATTGCCTTTATTCCCTTGCTTGTGCCGCCATTATTAT
TGGCATTTAACCGCATGCATATTGATAGACGCCTGATTGCTTGTTTGATTACCTTTGGACTTGTCACGACTTATATGTTT
ATTCCTTATGGGTTTGGCGATATTTATCTCAATCAAATCATGCTCAAAAATGTTGGTGAAGCGGGTATCGATATCAGTAA
TATCTCGGTGACCAAAGCCATGGCGATTCCCGCTTTGGGTATGTTCGTGGGCTTACTGATTGCTGTATTTATCAGCTATC
GTAAACCGCGTCAGTATCAGCAGCTAGCAATTGATAAAGCTGCACATGATGAAGTGTTAGAAGGTGACGAGTTAAGCAAA
ACCGCGGCTACTGCAAAAACACAAAGTAAAATGAAGACGCTAGTGGCGATTGCAGCGATTGTCACTGCTTTTGTGGTGCA
GCTATATACTGATTCACTATTACTAGGATCTATGTTTGGTTTTGGCGTCTTTATGGCGACAGGCGTCGTCAAATGGCGTG
ATGCCGATACGGTCTTTAATGACGGTATCAAGCTGATGGCAATGATTGGCTTTATTATGATTACGGCACAAGGGTTTGCG
GAAGTCATGAAAGCGACTGAGCAAATACAGCCATTGGTCGATGGAGCGGCATCGTTGTTTGCTGGTAACAAAGCGATGGC
AGCATTTATTATGTTACTCATTGGCTTGATTGTAACTATGGGTATTGGCTCATCCTTTTCGACCATTCCAATTTTGGCAG
CGATTTATGTCCCACTTTGTATTTCGCTTGGGTTTTCGCCATTGGCAACAGTAGCTATTATTGGAACGGCTGGTGCGCTT
GGTGATGCCGGTTCTCCAGCGTCAGATTCAACATTGGGTCCCACCTCTGGTCTAAATGTTGATGGACAACATGACCATAT
CAAAGACAGCGTGGTGCCAACCTTTATCCATTACAATATTCCGTTATTGATCTTTGGTTGGATTGCAGCGATGGTATTGT
AG

Upstream 100 bases:

>100_bases
TTCAAATAGCAACTGTGTGGATTAAAGTGCTAGGGTTAAATAAATAGGTCAGCAATGTTGTCAATGGCAGGCTAAAAAAT
ATAGGGTAAAGGGCGAGAAT

Downstream 100 bases:

>100_bases
GTTTTAATATTTGTAAAATTCTCAGTAGTTTTGTAGGGTGTGCCGTATGCACCCTACAGCTTTCATTAATTTTTAATCAA
CGCTAACCTTTAGAAAATAC

Product: Na+/H+ antiporter NhaC

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MTINAVLLAVVIMLGLSLARVHVVLSLLIGALAGGLIAGLGMTDTLNAFQEGIKNGAQIALSYALLGAFAVAIAHSGLPQ
SLAGAVIKRIDAGGTSGMIKYMLFAGLVTMSCFSQNLIPIHIAFIPLLVPPLLLAFNRMHIDRRLIACLITFGLVTTYMF
IPYGFGDIYLNQIMLKNVGEAGIDISNISVTKAMAIPALGMFVGLLIAVFISYRKPRQYQQLAIDKAAHDEVLEGDELSK
TAATAKTQSKMKTLVAIAAIVTAFVVQLYTDSLLLGSMFGFGVFMATGVVKWRDADTVFNDGIKLMAMIGFIMITAQGFA
EVMKATEQIQPLVDGAASLFAGNKAMAAFIMLLIGLIVTMGIGSSFSTIPILAAIYVPLCISLGFSPLATVAIIGTAGAL
GDAGSPASDSTLGPTSGLNVDGQHDHIKDSVVPTFIHYNIPLLIFGWIAAMVL

Sequences:

>Translated_453_residues
MTINAVLLAVVIMLGLSLARVHVVLSLLIGALAGGLIAGLGMTDTLNAFQEGIKNGAQIALSYALLGAFAVAIAHSGLPQ
SLAGAVIKRIDAGGTSGMIKYMLFAGLVTMSCFSQNLIPIHIAFIPLLVPPLLLAFNRMHIDRRLIACLITFGLVTTYMF
IPYGFGDIYLNQIMLKNVGEAGIDISNISVTKAMAIPALGMFVGLLIAVFISYRKPRQYQQLAIDKAAHDEVLEGDELSK
TAATAKTQSKMKTLVAIAAIVTAFVVQLYTDSLLLGSMFGFGVFMATGVVKWRDADTVFNDGIKLMAMIGFIMITAQGFA
EVMKATEQIQPLVDGAASLFAGNKAMAAFIMLLIGLIVTMGIGSSFSTIPILAAIYVPLCISLGFSPLATVAIIGTAGAL
GDAGSPASDSTLGPTSGLNVDGQHDHIKDSVVPTFIHYNIPLLIFGWIAAMVL
>Mature_452_residues
TINAVLLAVVIMLGLSLARVHVVLSLLIGALAGGLIAGLGMTDTLNAFQEGIKNGAQIALSYALLGAFAVAIAHSGLPQS
LAGAVIKRIDAGGTSGMIKYMLFAGLVTMSCFSQNLIPIHIAFIPLLVPPLLLAFNRMHIDRRLIACLITFGLVTTYMFI
PYGFGDIYLNQIMLKNVGEAGIDISNISVTKAMAIPALGMFVGLLIAVFISYRKPRQYQQLAIDKAAHDEVLEGDELSKT
AATAKTQSKMKTLVAIAAIVTAFVVQLYTDSLLLGSMFGFGVFMATGVVKWRDADTVFNDGIKLMAMIGFIMITAQGFAE
VMKATEQIQPLVDGAASLFAGNKAMAAFIMLLIGLIVTMGIGSSFSTIPILAAIYVPLCISLGFSPLATVAIIGTAGALG
DAGSPASDSTLGPTSGLNVDGQHDHIKDSVVPTFIHYNIPLLIFGWIAAMVL

Specific function: Unknown

COG id: COG2056

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991
- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 47633; Mature: 47501

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHC
>Mature Secondary Structure 
TINAVLLAVVIMLGLSLARVHVVLSLLIGALAGGLIAGLGMTDTLNAFQEGIKNGAQIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHH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CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12620739; 8021208 [H]