| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006568
Identifier: 93006568
GI number: 93006568
Start: 2158827
End: 2160161
Strand: Reverse
Name: 93006568
Synonym: Pcryo_1744
Alternate gene names: NA
Gene position: 2160161-2158827 (Counterclockwise)
Preceding gene: 93006577
Following gene: 93006567
Centisome position: 70.6
GC content: 44.12
Gene sequence:
>1335_bases ATGGATGTAACTTCATTGTGGCAAACAATCGCTGAGCACCCTGAGTTTTTTGCCATGCTTACCATTCCGCCGGTGACAGC ATTTGTGACATGGATTCATGTCTGGATGGCGCTCAAGATGTTGTTTTATCCGATTAAGTTTCGCGGTATACGCATCCCTA ATTTCCCATTCTTTGGGCTACCAGGTCTTGGCTGGCAAGGTATTGTGCCAAGAAAAGCGGGTAAGATATCTGGCGTGATT GTTGACCAGACGCTATCTAAGCTTGGCTCGCTTGATGAGTTTTTTCAGGCTATGGAACCAGATCAGATGGCGCTGTTCAT CACTGAGGCGGTTGATAAAAACCTTGAAAACTTGATTGATGAAATTATGCTTGATCATTCGCCAGCACTGTGGGGCAATC TGCCTTATGCGCTCAAGCGCCGTGTCTATGCCCAAGCGCACCAAGAGCTGCCAAGCATTATGCAATCTTTGGTGACTGAC TTGACCTATCATGTCGAAGATTTGGTCGATATGCGCAAGATGATTGTCAATAAGATGGAGAGTGATCGTCGTTTGATGGT CAATATGTTCTTAAAAGTCGGACAAAAAGAAATCAATTTTATTTGGCATATTAGTGCTTTGATTGGGCTGATTTTTGGCA TTATCCAAATGTTTATATTCTTGGTAGTGCCGCAACATTGGACAGTACCGTTTTTTGCGGCCATTTGGGGCTTTTTGACC AATTGGATTGCGATTTGGATGGTATTTAATCCTGTAGAGCCGCATTTTATCCGTTATGTGAAGTTTTTTGCGCTACAGAG CCGTTTTCCTTTTATCAAGCCACAATTACCGCATATTGCTCGATATCGACTCCAAGGCGGCTTTATGAAGCGCCAAGAAG AGGTATCTGAAGTATTTGCTGAGATTGTGGTCAAAGATTTGGTGACGCTTGAGAACATCATGAATGAGATGATGTATGGT GACCGCGCTATTGAGACGCGTGAATTGATGAAGTCGCATCTGTATAAAGTCTTAGAGTCACCAGTGATTAATACGACTTT ACGATTGGGACTGGGTCGCCGCGAGTTTGGGCAATTAAAAAATACCATCATTGATAAATCTATCGTTGCAACGATGGTGC CACTAAGGGATCCTGAGCTCAATGAAAGTCGTGCCAGTAAGATATTTGGACTGTTTCGTGATCGCATCCGTGCGCTGACG CCTGATGAATTCCAAAACTTATTACGTCCTGCCTTTCGTGAAGATGAGATGACGCTAATTGTGCTTGGTGGCTTGACGGG ATTTTTGGCAGGTTGGCTACATCTGGTATTGGTGTTTTTCCCAGCCATGCAGTGA
Upstream 100 bases:
>100_bases GTAGTAGTTATTGGGAAGAGGGCTTCTTATTGCTAAGCATTGTTAATGTGCTCAGAATATTTGGTCAACATCGATTATCA CGGCAAGGATACATAAAGTC
Downstream 100 bases:
>100_bases TAAGCAATGTTTTATGTTTTTTATACACATCGCATACAGAGTGGATACAGAAACGTGACAAGTTGACGCTAATGTACCAT GTTGTAAGCGCCCTAAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MDVTSLWQTIAEHPEFFAMLTIPPVTAFVTWIHVWMALKMLFYPIKFRGIRIPNFPFFGLPGLGWQGIVPRKAGKISGVI VDQTLSKLGSLDEFFQAMEPDQMALFITEAVDKNLENLIDEIMLDHSPALWGNLPYALKRRVYAQAHQELPSIMQSLVTD LTYHVEDLVDMRKMIVNKMESDRRLMVNMFLKVGQKEINFIWHISALIGLIFGIIQMFIFLVVPQHWTVPFFAAIWGFLT NWIAIWMVFNPVEPHFIRYVKFFALQSRFPFIKPQLPHIARYRLQGGFMKRQEEVSEVFAEIVVKDLVTLENIMNEMMYG DRAIETRELMKSHLYKVLESPVINTTLRLGLGRREFGQLKNTIIDKSIVATMVPLRDPELNESRASKIFGLFRDRIRALT PDEFQNLLRPAFREDEMTLIVLGGLTGFLAGWLHLVLVFFPAMQ
Sequences:
>Translated_444_residues MDVTSLWQTIAEHPEFFAMLTIPPVTAFVTWIHVWMALKMLFYPIKFRGIRIPNFPFFGLPGLGWQGIVPRKAGKISGVI VDQTLSKLGSLDEFFQAMEPDQMALFITEAVDKNLENLIDEIMLDHSPALWGNLPYALKRRVYAQAHQELPSIMQSLVTD LTYHVEDLVDMRKMIVNKMESDRRLMVNMFLKVGQKEINFIWHISALIGLIFGIIQMFIFLVVPQHWTVPFFAAIWGFLT NWIAIWMVFNPVEPHFIRYVKFFALQSRFPFIKPQLPHIARYRLQGGFMKRQEEVSEVFAEIVVKDLVTLENIMNEMMYG DRAIETRELMKSHLYKVLESPVINTTLRLGLGRREFGQLKNTIIDKSIVATMVPLRDPELNESRASKIFGLFRDRIRALT PDEFQNLLRPAFREDEMTLIVLGGLTGFLAGWLHLVLVFFPAMQ >Mature_444_residues MDVTSLWQTIAEHPEFFAMLTIPPVTAFVTWIHVWMALKMLFYPIKFRGIRIPNFPFFGLPGLGWQGIVPRKAGKISGVI VDQTLSKLGSLDEFFQAMEPDQMALFITEAVDKNLENLIDEIMLDHSPALWGNLPYALKRRVYAQAHQELPSIMQSLVTD LTYHVEDLVDMRKMIVNKMESDRRLMVNMFLKVGQKEINFIWHISALIGLIFGIIQMFIFLVVPQHWTVPFFAAIWGFLT NWIAIWMVFNPVEPHFIRYVKFFALQSRFPFIKPQLPHIARYRLQGGFMKRQEEVSEVFAEIVVKDLVTLENIMNEMMYG DRAIETRELMKSHLYKVLESPVINTTLRLGLGRREFGQLKNTIIDKSIVATMVPLRDPELNESRASKIFGLFRDRIRALT PDEFQNLLRPAFREDEMTLIVLGGLTGFLAGWLHLVLVFFPAMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51497; Mature: 51497
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVTSLWQTIAEHPEFFAMLTIPPVTAFVTWIHVWMALKMLFYPIKFRGIRIPNFPFFGL CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCC PGLGWQGIVPRKAGKISGVIVDQTLSKLGSLDEFFQAMEPDQMALFITEAVDKNLENLID CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH EIMLDHSPALWGNLPYALKRRVYAQAHQELPSIMQSLVTDLTYHVEDLVDMRKMIVNKME HHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SDRRLMVNMFLKVGQKEINFIWHISALIGLIFGIIQMFIFLVVPQHWTVPFFAAIWGFLT CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH NWIAIWMVFNPVEPHFIRYVKFFALQSRFPFIKPQLPHIARYRLQGGFMKRQEEVSEVFA HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH EIVVKDLVTLENIMNEMMYGDRAIETRELMKSHLYKVLESPVINTTLRLGLGRREFGQLK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHH NTIIDKSIVATMVPLRDPELNESRASKIFGLFRDRIRALTPDEFQNLLRPAFREDEMTLI HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEE VLGGLTGFLAGWLHLVLVFFPAMQ EECCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDVTSLWQTIAEHPEFFAMLTIPPVTAFVTWIHVWMALKMLFYPIKFRGIRIPNFPFFGL CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCC PGLGWQGIVPRKAGKISGVIVDQTLSKLGSLDEFFQAMEPDQMALFITEAVDKNLENLID CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH EIMLDHSPALWGNLPYALKRRVYAQAHQELPSIMQSLVTDLTYHVEDLVDMRKMIVNKME HHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SDRRLMVNMFLKVGQKEINFIWHISALIGLIFGIIQMFIFLVVPQHWTVPFFAAIWGFLT CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH NWIAIWMVFNPVEPHFIRYVKFFALQSRFPFIKPQLPHIARYRLQGGFMKRQEEVSEVFA HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH EIVVKDLVTLENIMNEMMYGDRAIETRELMKSHLYKVLESPVINTTLRLGLGRREFGQLK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHH NTIIDKSIVATMVPLRDPELNESRASKIFGLFRDRIRALTPDEFQNLLRPAFREDEMTLI HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEE VLGGLTGFLAGWLHLVLVFFPAMQ EECCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA