| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is argC [H]
Identifier: 93006504
GI number: 93006504
Start: 2067574
End: 2068641
Strand: Reverse
Name: argC [H]
Synonym: Pcryo_1680
Alternate gene names: 93006504
Gene position: 2068641-2067574 (Counterclockwise)
Preceding gene: 93006505
Following gene: 93006503
Centisome position: 67.61
GC content: 44.85
Gene sequence:
>1068_bases ATGATTTCAGCAGCGATTGTCGGTGGCACAGGTTATACAGGTATTGAGTTGATACGTCTATTATCTGCCCATCCTAAAGT GTCTATTGACTTATTAACCTCGCGTAGCGAAGCGGGCACTCGCGCTGATGAGATATTCCCAAGTTTACGCGGTATTTCAG ATATTGTGTTTAGTGATCTAGGGGACGAGACGCTAGCGACACTACAACAGTGCGATGTGGTATTTTTTGCCACGCCGCAT GGCGTTGCAATGAAGCAAGCAGAGGCTTTGACTCAAGCTGGGGTAAAAGTCATTGATTTGGCGGCAGATTTTCGTTTGCA GTCATTGAGCGAGTTTGAGCACTGGTATCAACAAATGCACACTTGTCCTGACCTACTAAAAACAGCCGTTTATGGTTTAC CTGAAGTCAATCGCGCCAAAATTGCTGAGGCATTGGTGGTTGGCAACCCAGGTTGCTATCCGACTACAGCTATCTTGGGT TTAAAGCCGATAATTGAAGCGCAAAATAAGCAATCTAAACAGTTGATTGAATCACGCATTGTTATCGATGCCAAATCTGG TGTTTCTGGCGCTGGTCGCCAAGCCAGTCTTGCACTGAATTATGCAGAAAGCACAGACAATTTTAAGGCATATAGCGTTG AAGGTCATCGCCATTTGCCAGAGATTGAGCAAGGTGTTGCCCAATTACTAGACAGTCAGTTTAAACATCGTATTCGTTTT TTGCCGCATCTGGTACCGATGATACGCGGTATGTTGAGCTCTATTCATATGGAGCTGACCGATGCAGGTGCTTTAGTGGA TTGGCAACAAGTATTTGAGCAAAGCTATGCATCAGAACAATTTATAGATGTTATGCCAAAAGGGCTCTATCCCGATACCC GTAGTGTACGTGCCAGCAATCGATTGCGTATTGCTGTTCACCAAGACAATGAGCGTGCCGAATTAACTGTCATTGTCGTA CAAGACAATTTAGTCAAAGGGGCAGCTGGGCAAGCAGTGCAAAACATGAATGTCATGTTTGGACTGGATGAGTCTCTTGG TTTAAATTTTGCGCCCATCGTTCCTTAA
Upstream 100 bases:
>100_bases AAATCTAAAAAGTACGATTTGAGATATGTTCTTAGTTATTTAACTGAGTTTATATCTCATATTTATTAAGTAATAGTAAA GTAGCAGAAAAGGATATCTT
Downstream 100 bases:
>100_bases CAGATGTTTAGTTGTAATTAAATTATCCTCATTTATGATACTAGGTATTGATTATAAATTCCGCTATAATAACTTGCCTT TCCTGTTAAGAGATACTGCC
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase [H]
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MISAAIVGGTGYTGIELIRLLSAHPKVSIDLLTSRSEAGTRADEIFPSLRGISDIVFSDLGDETLATLQQCDVVFFATPH GVAMKQAEALTQAGVKVIDLAADFRLQSLSEFEHWYQQMHTCPDLLKTAVYGLPEVNRAKIAEALVVGNPGCYPTTAILG LKPIIEAQNKQSKQLIESRIVIDAKSGVSGAGRQASLALNYAESTDNFKAYSVEGHRHLPEIEQGVAQLLDSQFKHRIRF LPHLVPMIRGMLSSIHMELTDAGALVDWQQVFEQSYASEQFIDVMPKGLYPDTRSVRASNRLRIAVHQDNERAELTVIVV QDNLVKGAAGQAVQNMNVMFGLDESLGLNFAPIVP
Sequences:
>Translated_355_residues MISAAIVGGTGYTGIELIRLLSAHPKVSIDLLTSRSEAGTRADEIFPSLRGISDIVFSDLGDETLATLQQCDVVFFATPH GVAMKQAEALTQAGVKVIDLAADFRLQSLSEFEHWYQQMHTCPDLLKTAVYGLPEVNRAKIAEALVVGNPGCYPTTAILG LKPIIEAQNKQSKQLIESRIVIDAKSGVSGAGRQASLALNYAESTDNFKAYSVEGHRHLPEIEQGVAQLLDSQFKHRIRF LPHLVPMIRGMLSSIHMELTDAGALVDWQQVFEQSYASEQFIDVMPKGLYPDTRSVRASNRLRIAVHQDNERAELTVIVV QDNLVKGAAGQAVQNMNVMFGLDESLGLNFAPIVP >Mature_355_residues MISAAIVGGTGYTGIELIRLLSAHPKVSIDLLTSRSEAGTRADEIFPSLRGISDIVFSDLGDETLATLQQCDVVFFATPH GVAMKQAEALTQAGVKVIDLAADFRLQSLSEFEHWYQQMHTCPDLLKTAVYGLPEVNRAKIAEALVVGNPGCYPTTAILG LKPIIEAQNKQSKQLIESRIVIDAKSGVSGAGRQASLALNYAESTDNFKAYSVEGHRHLPEIEQGVAQLLDSQFKHRIRF LPHLVPMIRGMLSSIHMELTDAGALVDWQQVFEQSYASEQFIDVMPKGLYPDTRSVRASNRLRIAVHQDNERAELTVIVV QDNLVKGAAGQAVQNMNVMFGLDESLGLNFAPIVP
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790396, Length=351, Percent_Identity=35.3276353276353, Blast_Score=181, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6320913, Length=352, Percent_Identity=26.4204545454545, Blast_Score=103, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023013 - InterPro: IPR000706 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.38 [H]
Molecular weight: Translated: 38779; Mature: 38779
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISAAIVGGTGYTGIELIRLLSAHPKVSIDLLTSRSEAGTRADEIFPSLRGISDIVFSDL CCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC GDETLATLQQCDVVFFATPHGVAMKQAEALTQAGVKVIDLAADFRLQSLSEFEHWYQQMH CHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHH TCPDLLKTAVYGLPEVNRAKIAEALVVGNPGCYPTTAILGLKPIIEAQNKQSKQLIESRI CCHHHHHHHHHCCCCCCHHHHHHHHEECCCCCCHHHHHHHCHHHHHCCCHHHHHHHHHHE VIDAKSGVSGAGRQASLALNYAESTDNFKAYSVEGHRHLPEIEQGVAQLLDSQFKHRIRF EEEECCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH LPHLVPMIRGMLSSIHMELTDAGALVDWQQVFEQSYASEQFIDVMPKGLYPDTRSVRASN HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCC RLRIAVHQDNERAELTVIVVQDNLVKGAAGQAVQNMNVMFGLDESLGLNFAPIVP EEEEEEECCCCCCEEEEEEEECCCCCCCCCHHHHCCEEEEECCHHCCCCCCCCCC >Mature Secondary Structure MISAAIVGGTGYTGIELIRLLSAHPKVSIDLLTSRSEAGTRADEIFPSLRGISDIVFSDL CCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC GDETLATLQQCDVVFFATPHGVAMKQAEALTQAGVKVIDLAADFRLQSLSEFEHWYQQMH CHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHH TCPDLLKTAVYGLPEVNRAKIAEALVVGNPGCYPTTAILGLKPIIEAQNKQSKQLIESRI CCHHHHHHHHHCCCCCCHHHHHHHHEECCCCCCHHHHHHHCHHHHHCCCHHHHHHHHHHE VIDAKSGVSGAGRQASLALNYAESTDNFKAYSVEGHRHLPEIEQGVAQLLDSQFKHRIRF EEEECCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH LPHLVPMIRGMLSSIHMELTDAGALVDWQQVFEQSYASEQFIDVMPKGLYPDTRSVRASN HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCC RLRIAVHQDNERAELTVIVVQDNLVKGAAGQAVQNMNVMFGLDESLGLNFAPIVP EEEEEEECCCCCCEEEEEEEECCCCCCCCCHHHHCCEEEEECCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA