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The map label for this gene is 93006450

Identifier: 93006450

GI number: 93006450

Start: 2000332

End: 2003067

Strand: Reverse

Name: 93006450

Synonym: Pcryo_1626

Alternate gene names: NA

Gene position: 2003067-2000332 (Counterclockwise)

Preceding gene: 93006451

Following gene: 93006447

Centisome position: 65.46

GC content: 45.21

Gene sequence:

>2736_bases
ATGACCACCACACCACAAACCACCACCCATGAAAAAGCCCGTGCATTTAGCACAGGCTTTACAGTGGTAATGAATAGTTT
TAATGCAGTCACACGGCAAGGACTGGCAGACGATCCTACTTTAATAAAACTACATGAGCTATTACCGCCCAATAGCTTGT
TAAGCGTTACTGATGATCTTACTACAAATGACGCGTCAGTAGTACCGACAGCTGGCACGATAGCCCTACGATTGCATGAC
AAACAAGGCGATATTGTAGGCGCGGTATTCTACACACCAAACAGCAAAGCAAAGCCCATTGTTATTGATCCTACAGGGTA
TGGCGCTATCGTCATTGGTGAGGTAAACAAAGGCAATGAGATAATCGCTTTTGATGAAGCAGAATATGGCATTGATGCCT
ATCAGTGTATGGCAGACGACAAAACAACCTTTATTATTAGCCCTCAAAAGACAAAGCAATGCTTTAAAAAGATGGTGCAG
CATTGGAGTAGCGGATCACTGCTAACCGTACCAATGACTATAGATAACAAAGGCATGATAAATCTATTGGCAGGTGTGAA
TGCTAGGGCATTGCTTACTGTGGCTGATATTGTCACGATGCTACATGCCAATCATAGCTATGAGGCAATACTGGCAGCTG
ATGACACCCAGCTAATAAGTTTAAAAGACACTGCTTACTATCCTGAATGGCGCGATGATTCACAGCTGAATGAACCGATG
ATTTATGGTGATGGGCGTTTTGAGCTATACCATGATGGACTGTTTTTTGTGAAGTATAACGATGACGATCCAGCAAACAT
AACCTTTAAGTTTAAGGCTTTTGTTTGTTCACCGATTGAGGTTATCGCAAAGACACGGGACACAAGCAGCGGTACATGGG
GGCGGCTATTACAATGGCGTGATGATGATAGCGTGCTACATACGTGGTCAATGCCGTTATCACTGCTACAAGGTGATGCC
CGTGAGTATCGTAGAGAGCTAGCCAGTCAAGGATTGAACATTACCACCAACGGCAAAAAGCGCAATTACTTAGACACCTA
TATTCAGGACTATCCTATTCATAAACGGGCGTTATGCGTGGATAAGCTAGGCTGGCATGACGGGCAATATATATTACCTG
ACAGCGCAATAGGCGGCGATGGCAAGCAGTTAATAGTCTATCAGTCTGCCCATGCAATCAATAGCACCATAGCCCAGCAA
GGTACATTAGCCCAATGGCGTGATGAACTATGCAAAAAACTAGCAGATCAAAGCCGTTTTGTTTTCTCTATTGCTTGCGC
GTTTGCTGGTCAATTGTTAGAGCTGTTAGATGATGATGGGGGTGGCTTTCACCTTTTAGGATCATCAAGCATGGGCAAGT
CATTATCACTTAAAACAGCGTCTAGCGTATGGGGCAAGCCTGACAGCTATACTAAGACATGGCGCAGCACTGATAACGCC
TTAGAGGGCACAGCCAGCGAGCATAACGATAGTTTCTTACCGCTTGATGAAATCAGCGAATGTGATCCACGGATAGTAGG
TAACAGCGTTTACATGTTGGCTAATGGCAAAGGCAAAGGTAGAAGCACCACCACAGGACATAATCGCACTGCTAAGACAT
GGCGCATTATTTTCTTATCTAATGGTGAGGAGTCGCTACAAAACTTTATGGCACAAGCAGGACAGAAAACGAATGCAGGT
ATTGAGGTTCGAGTAGCACATATAGATGCTGATGCTGGTCAAGGTTTAAAGACGTTTGATAGTTTGGTACTGGCAGACAC
AGGCGCAGCACAAGCCGATAAGATCAAGGAGTTATCACACACTTACTATGGATCAGCTGGCATAGCATGGCTGGAATATA
TCACCAATGACAAAGCAGCGACCACAGCCACCGCCAAGCAGCTTGTAAGTGACTTTATGAGCCATTACCCACAGCTAGCA
CCGCAAGCGCATAGAGTGGCTAAACGGTTCGCTATTGTTGCCGCGGCTGGTGAGATGGCAACAGGTGCAGACATTACGGG
CTGGCAAGCACGACAAGCGACCACAGCCGTTATGACATGCTTAGATAATTGGCTTGATAACTATGGGCGTGATGGTGAGC
ATGAGCAGCGCCAAATCATTAAACATATTCAAGCATTTATTGAATTGCATGGTAGTAGTCGCTTTCAACCATGTGAGAAG
TCTTTTTATGCTGATAGTGAGCAGAAAGTTACTAACCGTGTTGGCTATCGTAAGCAAGGCAGCGATGATTACTATTTTTA
TATTAATGCGTTTGAAAAAGAGGTGTGCACACCGTATGAGCTTAAAAAAGTAACGCAAGTATTAGATGATGCTAGTCTGC
TAATTACCAATGAAACCAACAAAAAGACGTTTAGAGTCCCAGCACCAACAGCAAAGAACCCCAAAGCCCGTACGCGTGTT
TATGCCATCAAAAGCGACATACTAAGTTATGAAACTGATAAAAGCACAGGGACAGCGCGGACACAGCGGACACACCATAT
AGATCAAGGGCTAGAGGCTGTCCACAGCCAAAGGGACACACGCGGACACAGCGGACACAGTGAGCCACAAGTAGATGAAT
TGTCCGCCTTGTCCGCCTACCCAAAAACACGGGGGACAGCTGCAAACCCAGTAATCACGGGCGATGTCCCCTTGTCCGCC
TTGTCCGCCACTAAAAAGCAAGGTACAACAAAACAGGGTGTAATTGATCCTGATAATGAAATACCACCGTTTGGCAGTGA
AGTAGATTATTCATAA

Upstream 100 bases:

>100_bases
ACCCACCAAAGCAAAGCCGTAAGCACGCTAAGCGCAAAAGCTACTATAAAAAATATAGAGAGCAGCGCAAGCCGAACCAG
TCACAAGCAAGGGGGACTAA

Downstream 100 bases:

>100_bases
TTAATTAATGATTTAACAAAGGGTAGGCGTTTATCGTCTGCCTTTTTTTATAGTGTAAAGATACCCTAAGGAAACCCTAA
GGTTTTGCGCTCGATACTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Prophage Primase; Superfamily II Helicase; Inner Membrane; Primase C 2 Family; DNA/RNA Helicase; DNA Helicase Inner Membrane Protein; Conserved Domain Protein; Zinc Finger CHC2-Family Protein; Inner Membrane Protein Phage Origin; DNA Primase TraC

Number of amino acids: Translated: 911; Mature: 910

Protein sequence:

>911_residues
MTTTPQTTTHEKARAFSTGFTVVMNSFNAVTRQGLADDPTLIKLHELLPPNSLLSVTDDLTTNDASVVPTAGTIALRLHD
KQGDIVGAVFYTPNSKAKPIVIDPTGYGAIVIGEVNKGNEIIAFDEAEYGIDAYQCMADDKTTFIISPQKTKQCFKKMVQ
HWSSGSLLTVPMTIDNKGMINLLAGVNARALLTVADIVTMLHANHSYEAILAADDTQLISLKDTAYYPEWRDDSQLNEPM
IYGDGRFELYHDGLFFVKYNDDDPANITFKFKAFVCSPIEVIAKTRDTSSGTWGRLLQWRDDDSVLHTWSMPLSLLQGDA
REYRRELASQGLNITTNGKKRNYLDTYIQDYPIHKRALCVDKLGWHDGQYILPDSAIGGDGKQLIVYQSAHAINSTIAQQ
GTLAQWRDELCKKLADQSRFVFSIACAFAGQLLELLDDDGGGFHLLGSSSMGKSLSLKTASSVWGKPDSYTKTWRSTDNA
LEGTASEHNDSFLPLDEISECDPRIVGNSVYMLANGKGKGRSTTTGHNRTAKTWRIIFLSNGEESLQNFMAQAGQKTNAG
IEVRVAHIDADAGQGLKTFDSLVLADTGAAQADKIKELSHTYYGSAGIAWLEYITNDKAATTATAKQLVSDFMSHYPQLA
PQAHRVAKRFAIVAAAGEMATGADITGWQARQATTAVMTCLDNWLDNYGRDGEHEQRQIIKHIQAFIELHGSSRFQPCEK
SFYADSEQKVTNRVGYRKQGSDDYYFYINAFEKEVCTPYELKKVTQVLDDASLLITNETNKKTFRVPAPTAKNPKARTRV
YAIKSDILSYETDKSTGTARTQRTHHIDQGLEAVHSQRDTRGHSGHSEPQVDELSALSAYPKTRGTAANPVITGDVPLSA
LSATKKQGTTKQGVIDPDNEIPPFGSEVDYS

Sequences:

>Translated_911_residues
MTTTPQTTTHEKARAFSTGFTVVMNSFNAVTRQGLADDPTLIKLHELLPPNSLLSVTDDLTTNDASVVPTAGTIALRLHD
KQGDIVGAVFYTPNSKAKPIVIDPTGYGAIVIGEVNKGNEIIAFDEAEYGIDAYQCMADDKTTFIISPQKTKQCFKKMVQ
HWSSGSLLTVPMTIDNKGMINLLAGVNARALLTVADIVTMLHANHSYEAILAADDTQLISLKDTAYYPEWRDDSQLNEPM
IYGDGRFELYHDGLFFVKYNDDDPANITFKFKAFVCSPIEVIAKTRDTSSGTWGRLLQWRDDDSVLHTWSMPLSLLQGDA
REYRRELASQGLNITTNGKKRNYLDTYIQDYPIHKRALCVDKLGWHDGQYILPDSAIGGDGKQLIVYQSAHAINSTIAQQ
GTLAQWRDELCKKLADQSRFVFSIACAFAGQLLELLDDDGGGFHLLGSSSMGKSLSLKTASSVWGKPDSYTKTWRSTDNA
LEGTASEHNDSFLPLDEISECDPRIVGNSVYMLANGKGKGRSTTTGHNRTAKTWRIIFLSNGEESLQNFMAQAGQKTNAG
IEVRVAHIDADAGQGLKTFDSLVLADTGAAQADKIKELSHTYYGSAGIAWLEYITNDKAATTATAKQLVSDFMSHYPQLA
PQAHRVAKRFAIVAAAGEMATGADITGWQARQATTAVMTCLDNWLDNYGRDGEHEQRQIIKHIQAFIELHGSSRFQPCEK
SFYADSEQKVTNRVGYRKQGSDDYYFYINAFEKEVCTPYELKKVTQVLDDASLLITNETNKKTFRVPAPTAKNPKARTRV
YAIKSDILSYETDKSTGTARTQRTHHIDQGLEAVHSQRDTRGHSGHSEPQVDELSALSAYPKTRGTAANPVITGDVPLSA
LSATKKQGTTKQGVIDPDNEIPPFGSEVDYS
>Mature_910_residues
TTTPQTTTHEKARAFSTGFTVVMNSFNAVTRQGLADDPTLIKLHELLPPNSLLSVTDDLTTNDASVVPTAGTIALRLHDK
QGDIVGAVFYTPNSKAKPIVIDPTGYGAIVIGEVNKGNEIIAFDEAEYGIDAYQCMADDKTTFIISPQKTKQCFKKMVQH
WSSGSLLTVPMTIDNKGMINLLAGVNARALLTVADIVTMLHANHSYEAILAADDTQLISLKDTAYYPEWRDDSQLNEPMI
YGDGRFELYHDGLFFVKYNDDDPANITFKFKAFVCSPIEVIAKTRDTSSGTWGRLLQWRDDDSVLHTWSMPLSLLQGDAR
EYRRELASQGLNITTNGKKRNYLDTYIQDYPIHKRALCVDKLGWHDGQYILPDSAIGGDGKQLIVYQSAHAINSTIAQQG
TLAQWRDELCKKLADQSRFVFSIACAFAGQLLELLDDDGGGFHLLGSSSMGKSLSLKTASSVWGKPDSYTKTWRSTDNAL
EGTASEHNDSFLPLDEISECDPRIVGNSVYMLANGKGKGRSTTTGHNRTAKTWRIIFLSNGEESLQNFMAQAGQKTNAGI
EVRVAHIDADAGQGLKTFDSLVLADTGAAQADKIKELSHTYYGSAGIAWLEYITNDKAATTATAKQLVSDFMSHYPQLAP
QAHRVAKRFAIVAAAGEMATGADITGWQARQATTAVMTCLDNWLDNYGRDGEHEQRQIIKHIQAFIELHGSSRFQPCEKS
FYADSEQKVTNRVGYRKQGSDDYYFYINAFEKEVCTPYELKKVTQVLDDASLLITNETNKKTFRVPAPTAKNPKARTRVY
AIKSDILSYETDKSTGTARTQRTHHIDQGLEAVHSQRDTRGHSGHSEPQVDELSALSAYPKTRGTAANPVITGDVPLSAL
SATKKQGTTKQGVIDPDNEIPPFGSEVDYS

Specific function: Unknown

COG id: COG5519

COG function: function code L; Superfamily II helicase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100328; Mature: 100197

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTPQTTTHEKARAFSTGFTVVMNSFNAVTRQGLADDPTLIKLHELLPPNSLLSVTDDL
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHCCCCCCEEECCCC
TTNDASVVPTAGTIALRLHDKQGDIVGAVFYTPNSKAKPIVIDPTGYGAIVIGEVNKGNE
CCCCCEEECCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEECCCCCCEEEEEEECCCCE
IIAFDEAEYGIDAYQCMADDKTTFIISPQKTKQCFKKMVQHWSSGSLLTVPMTIDNKGMI
EEEECCCCCCCCHHEEECCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCE
NLLAGVNARALLTVADIVTMLHANHSYEAILAADDTQLISLKDTAYYPEWRDDSQLNEPM
EEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCE
IYGDGRFELYHDGLFFVKYNDDDPANITFKFKAFVCSPIEVIAKTRDTSSGTWGRLLQWR
EEECCEEEEEECCEEEEEECCCCCCEEEEEEEEEECCHHHHHHHCCCCCCCCHHHHEEEC
DDDSVLHTWSMPLSLLQGDAREYRRELASQGLNITTNGKKRNYLDTYIQDYPIHKRALCV
CCCCEEEECCCCHHHHCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCCHHHHHH
DKLGWHDGQYILPDSAIGGDGKQLIVYQSAHAINSTIAQQGTLAQWRDELCKKLADQSRF
HHCCCCCCCEECCCCCCCCCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHH
VFSIACAFAGQLLELLDDDGGGFHLLGSSSMGKSLSLKTASSVWGKPDSYTKTWRSTDNA
HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEHHHHCCCCCCCHHHHCCCCCH
LEGTASEHNDSFLPLDEISECDPRIVGNSVYMLANGKGKGRSTTTGHNRTAKTWRIIFLS
HCCCCCCCCCCCCCHHHHHCCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEE
NGEESLQNFMAQAGQKTNAGIEVRVAHIDADAGQGLKTFDSLVLADTGAAQADKIKELSH
CCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHEEEECCCCCHHHHHHHHHH
TYYGSAGIAWLEYITNDKAATTATAKQLVSDFMSHYPQLAPQAHRVAKRFAIVAAAGEMA
HHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCC
TGADITGWQARQATTAVMTCLDNWLDNYGRDGEHEQRQIIKHIQAFIELHGSSRFQPCEK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
SFYADSEQKVTNRVGYRKQGSDDYYFYINAFEKEVCTPYELKKVTQVLDDASLLITNETN
HHCCCCHHHHHHHCCCCCCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHCCCEEEEEECCC
KKTFRVPAPTAKNPKARTRVYAIKSDILSYETDKSTGTARTQRTHHIDQGLEAVHSQRDT
CEEEEECCCCCCCCCHHHEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
RGHSGHSEPQVDELSALSAYPKTRGTAANPVITGDVPLSALSATKKQGTTKQGVIDPDNE
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCC
IPPFGSEVDYS
CCCCCCCCCCC
>Mature Secondary Structure 
TTTPQTTTHEKARAFSTGFTVVMNSFNAVTRQGLADDPTLIKLHELLPPNSLLSVTDDL
CCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHCCCCCCEEECCCC
TTNDASVVPTAGTIALRLHDKQGDIVGAVFYTPNSKAKPIVIDPTGYGAIVIGEVNKGNE
CCCCCEEECCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEECCCCCCEEEEEEECCCCE
IIAFDEAEYGIDAYQCMADDKTTFIISPQKTKQCFKKMVQHWSSGSLLTVPMTIDNKGMI
EEEECCCCCCCCHHEEECCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCE
NLLAGVNARALLTVADIVTMLHANHSYEAILAADDTQLISLKDTAYYPEWRDDSQLNEPM
EEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCE
IYGDGRFELYHDGLFFVKYNDDDPANITFKFKAFVCSPIEVIAKTRDTSSGTWGRLLQWR
EEECCEEEEEECCEEEEEECCCCCCEEEEEEEEEECCHHHHHHHCCCCCCCCHHHHEEEC
DDDSVLHTWSMPLSLLQGDAREYRRELASQGLNITTNGKKRNYLDTYIQDYPIHKRALCV
CCCCEEEECCCCHHHHCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCCHHHHHH
DKLGWHDGQYILPDSAIGGDGKQLIVYQSAHAINSTIAQQGTLAQWRDELCKKLADQSRF
HHCCCCCCCEECCCCCCCCCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHH
VFSIACAFAGQLLELLDDDGGGFHLLGSSSMGKSLSLKTASSVWGKPDSYTKTWRSTDNA
HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEHHHHCCCCCCCHHHHCCCCCH
LEGTASEHNDSFLPLDEISECDPRIVGNSVYMLANGKGKGRSTTTGHNRTAKTWRIIFLS
HCCCCCCCCCCCCCHHHHHCCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEE
NGEESLQNFMAQAGQKTNAGIEVRVAHIDADAGQGLKTFDSLVLADTGAAQADKIKELSH
CCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHEEEECCCCCHHHHHHHHHH
TYYGSAGIAWLEYITNDKAATTATAKQLVSDFMSHYPQLAPQAHRVAKRFAIVAAAGEMA
HHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCC
TGADITGWQARQATTAVMTCLDNWLDNYGRDGEHEQRQIIKHIQAFIELHGSSRFQPCEK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
SFYADSEQKVTNRVGYRKQGSDDYYFYINAFEKEVCTPYELKKVTQVLDDASLLITNETN
HHCCCCHHHHHHHCCCCCCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHCCCEEEEEECCC
KKTFRVPAPTAKNPKARTRVYAIKSDILSYETDKSTGTARTQRTHHIDQGLEAVHSQRDT
CEEEEECCCCCCCCCHHHEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
RGHSGHSEPQVDELSALSAYPKTRGTAANPVITGDVPLSALSATKKQGTTKQGVIDPDNE
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCC
IPPFGSEVDYS
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA