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The map label for this gene is yqaJ [H]

Identifier: 93006444

GI number: 93006444

Start: 1992052

End: 1993176

Strand: Reverse

Name: yqaJ [H]

Synonym: Pcryo_1620

Alternate gene names: 93006444

Gene position: 1993176-1992052 (Counterclockwise)

Preceding gene: 93006445

Following gene: 93006443

Centisome position: 65.14

GC content: 46.31

Gene sequence:

>1125_bases
ATGAACATGATCGCATTAAACACGACGACTCAGCCAAGACACACCAAGCGCACTACTGTTAAGATTAAGACGCCAATAAA
GACTAAGCATGGTATCGAAGATATGCCGAAGTCCAAGCTAGAGAGCAAACCCGTTAAGCCGTCTGCTCATCAATCAACCA
CTGCTAAACGTTTGGTCAATACCAAATCTTTGAGCCATGAGGACTGGCTACAAGTACGCAGACAAGGTATTGGCAGCTCT
GATGCTGCTGCCGCTTGTGGTATCCATCCTTATTTGTCTATGCTGGAGCTATGGATGATTAAGACCGGTCGTATCGACTC
TGATATCGATGAGAGCATCGAAGGGTACTCGCCATTGTATTGGGGCAATACCTTAGAGCCGATGGTCGCTAAATACTATC
AAGAGCATACCGGCAATAAGGTGCGCCGCGTCAATGCCATCTTGCAGCATCCTGAGCAGCCATTTATGCTGGCGAACTTA
GACTATGCAATCACTGGTAATGACGAGGTACAGATACTGGAATGTAAAACTGCTGGTGAACATGGTGCCAAGCTATGGAA
GCATGGCGTACCGCTCTATGTCACTTGCCAAGTACAACATCAACTGGCGGTCACGGGTAAAGCTGCGGCGCATATTTGCG
TTCTGCTTTGTGGACACGAAGCGAAGATTTATAAAGTTGAGCGTGATGAATACTTGATTGCATCCATCATGGAGCATGAG
CATCTGTTCTGGCAATACGTAGCAACGGACACGCCTCCAACTCCTGATCATTCGGAATCCGCAGCAAGAGCATTAAAACA
GCTTTATCCAACCCCTGAGCCCTCAAGCAAAGTTGATCTAACGGATGATGACGGTGCTAATAAACTGTTTGAGCAATTGC
TTAGCTACCGTGACTATATGCAAGAGTTAGAGCAGCGTCATGACCAAGTGAAGCATCAACTGCAAAGCTTAATTCAAGAC
AATGAGATTGCGGTATTTAAGAAAGGCGCTATCTCTTGGAAGCGCTCTAAAGACAGTGTCAGTCTTGATAGTAAAGCACT
AACCAAAGCGCATCCTGAGTTGCTCGAGCAGTTTAGTAAAACCCGTCAAGGCAGTCGTCGCTTTGTCATCCTTAACGATA
ACTGA

Upstream 100 bases:

>100_bases
CCTGACAATACAATCAACCACGCCCTTGAGCGTGGTTTTTTTATGTCGCCTTTTTAATAAACAGTATTAACCCATAACCA
ATCTAACGAAGGAATTCACT

Downstream 100 bases:

>100_bases
GCCAATAATCCGTCATCAATCATAATCCATAAATTAATCCACTCAATCAAATACGCGCATAACCGCCCACCTATCACAGG
TGGGCTTTTTTATGGCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MNMIALNTTTQPRHTKRTTVKIKTPIKTKHGIEDMPKSKLESKPVKPSAHQSTTAKRLVNTKSLSHEDWLQVRRQGIGSS
DAAAACGIHPYLSMLELWMIKTGRIDSDIDESIEGYSPLYWGNTLEPMVAKYYQEHTGNKVRRVNAILQHPEQPFMLANL
DYAITGNDEVQILECKTAGEHGAKLWKHGVPLYVTCQVQHQLAVTGKAAAHICVLLCGHEAKIYKVERDEYLIASIMEHE
HLFWQYVATDTPPTPDHSESAARALKQLYPTPEPSSKVDLTDDDGANKLFEQLLSYRDYMQELEQRHDQVKHQLQSLIQD
NEIAVFKKGAISWKRSKDSVSLDSKALTKAHPELLEQFSKTRQGSRRFVILNDN

Sequences:

>Translated_374_residues
MNMIALNTTTQPRHTKRTTVKIKTPIKTKHGIEDMPKSKLESKPVKPSAHQSTTAKRLVNTKSLSHEDWLQVRRQGIGSS
DAAAACGIHPYLSMLELWMIKTGRIDSDIDESIEGYSPLYWGNTLEPMVAKYYQEHTGNKVRRVNAILQHPEQPFMLANL
DYAITGNDEVQILECKTAGEHGAKLWKHGVPLYVTCQVQHQLAVTGKAAAHICVLLCGHEAKIYKVERDEYLIASIMEHE
HLFWQYVATDTPPTPDHSESAARALKQLYPTPEPSSKVDLTDDDGANKLFEQLLSYRDYMQELEQRHDQVKHQLQSLIQD
NEIAVFKKGAISWKRSKDSVSLDSKALTKAHPELLEQFSKTRQGSRRFVILNDN
>Mature_374_residues
MNMIALNTTTQPRHTKRTTVKIKTPIKTKHGIEDMPKSKLESKPVKPSAHQSTTAKRLVNTKSLSHEDWLQVRRQGIGSS
DAAAACGIHPYLSMLELWMIKTGRIDSDIDESIEGYSPLYWGNTLEPMVAKYYQEHTGNKVRRVNAILQHPEQPFMLANL
DYAITGNDEVQILECKTAGEHGAKLWKHGVPLYVTCQVQHQLAVTGKAAAHICVLLCGHEAKIYKVERDEYLIASIMEHE
HLFWQYVATDTPPTPDHSESAARALKQLYPTPEPSSKVDLTDDDGANKLFEQLLSYRDYMQELEQRHDQVKHQLQSLIQD
NEIAVFKKGAISWKRSKDSVSLDSKALTKAHPELLEQFSKTRQGSRRFVILNDN

Specific function: Unknown

COG id: COG5377

COG function: function code L; Phage-related protein, predicted endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011604
- InterPro:   IPR017482
- InterPro:   IPR011335
- InterPro:   IPR019080 [H]

Pfam domain/function: PF09588 YqaJ [H]

EC number: NA

Molecular weight: Translated: 42430; Mature: 42430

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMIALNTTTQPRHTKRTTVKIKTPIKTKHGIEDMPKSKLESKPVKPSAHQSTTAKRLVN
CCEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHCCHHHHHCCCCCCCCCHHHHHHHHHH
TKSLSHEDWLQVRRQGIGSSDAAAACGIHPYLSMLELWMIKTGRIDSDIDESIEGYSPLY
HHCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC
WGNTLEPMVAKYYQEHTGNKVRRVNAILQHPEQPFMLANLDYAITGNDEVQILECKTAGE
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCEEEEECCCCEEEEEECCCCH
HGAKLWKHGVPLYVTCQVQHQLAVTGKAAAHICVLLCGHEAKIYKVERDEYLIASIMEHE
HHHHHHHCCCCEEEEEEEEEEEEECCHHHHEEEEEEECCCCEEEEECCCHHHHHHHHHHH
HLFWQYVATDTPPTPDHSESAARALKQLYPTPEPSSKVDLTDDDGANKLFEQLLSYRDYM
HHEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH
QELEQRHDQVKHQLQSLIQDNEIAVFKKGAISWKRSKDSVSLDSKALTKAHPELLEQFSK
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHH
TRQGSRRFVILNDN
HHCCCCEEEEEECC
>Mature Secondary Structure
MNMIALNTTTQPRHTKRTTVKIKTPIKTKHGIEDMPKSKLESKPVKPSAHQSTTAKRLVN
CCEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHCCHHHHHCCCCCCCCCHHHHHHHHHH
TKSLSHEDWLQVRRQGIGSSDAAAACGIHPYLSMLELWMIKTGRIDSDIDESIEGYSPLY
HHCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC
WGNTLEPMVAKYYQEHTGNKVRRVNAILQHPEQPFMLANLDYAITGNDEVQILECKTAGE
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCEEEEECCCCEEEEEECCCCH
HGAKLWKHGVPLYVTCQVQHQLAVTGKAAAHICVLLCGHEAKIYKVERDEYLIASIMEHE
HHHHHHHCCCCEEEEEEEEEEEEECCHHHHEEEEEEECCCCEEEEECCCHHHHHHHHHHH
HLFWQYVATDTPPTPDHSESAARALKQLYPTPEPSSKVDLTDDDGANKLFEQLLSYRDYM
HHEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH
QELEQRHDQVKHQLQSLIQDNEIAVFKKGAISWKRSKDSVSLDSKALTKAHPELLEQFSK
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHH
TRQGSRRFVILNDN
HHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]