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The map label for this gene is ybeQ [H]

Identifier: 93006436

GI number: 93006436

Start: 1984715

End: 1985413

Strand: Reverse

Name: ybeQ [H]

Synonym: Pcryo_1612

Alternate gene names: 93006436

Gene position: 1985413-1984715 (Counterclockwise)

Preceding gene: 93006437

Following gene: 93006435

Centisome position: 64.89

GC content: 42.06

Gene sequence:

>699_bases
ATGAATCTACAAACGCTAAGGCAGATGTTTCTTTACAGGTTAATAGTTTTAGGCTTGTTAGTAGGGCTTGAAGTACCTGT
TGTTGCAGCAGACTTTACTACGACGAGTGTACAAGCTAATCAAGGGAGGGCATCAGCTCAATTCAACCTTGGTGTGATGT
ACGACGAAGGTAGTGGTATTGCTCAAGACACTGCTAAAGCATTTGAGTGGTATCAGAAGGCAGCAGAACAAGGCAATGCA
TCGGCTCAATTTAATATTGGGTGGATGTACGAGCACGCTGACGGCGTTAGTCAAGACTCTGTTAAAGCAGTTGAATGGTA
CAGGAAAGCTGCTGATCAAGGGTATGGTGATGCGCAGTACAATCTTGGATGGATGTATCATAACGGTAGAGGCATTAAAA
AGGATTATGATCAGGCAATGGATTGGTATTTAAAAGCTGCCTATCAAGGAGATGCTGGGGCTCAAAATAATATCGGTGAT
ATGTACGAAAAAGGTGCTGGCGTTAGTAAGGATAACGTAAAAGCAGCCAAATGGTATTTGAAGGCGGCCAATCAAGGATA
TGCCTTAGCTCAAAATAGTCTTGGTTTAATGTACTTTGAGGGCAGAGGTGTTCTTCAAGATAAAAAGCAGTCAAGAGATT
GGTATAGTAAAGCTTGTGATAATGGCGATCAACCTAGCTGTGATCAGTACGCTTATTAA

Upstream 100 bases:

>100_bases
TCATATTTATAGCTTTGATCGGATGACGATGAAGGGATACTTCTTAGGTGTGCCAGATTATTTAGCAGACCAGATATTGG
ATAGTTGAAAAGGAATAAAT

Downstream 100 bases:

>100_bases
ACAGATAACAGAAGAGCCGCCATAAGCGGATCATATTGTTCCGTACCGACAAGCTTGTCTTGATTGGCTTGGTTATGCCA
GTTGGATAACGTTTACATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MNLQTLRQMFLYRLIVLGLLVGLEVPVVAADFTTTSVQANQGRASAQFNLGVMYDEGSGIAQDTAKAFEWYQKAAEQGNA
SAQFNIGWMYEHADGVSQDSVKAVEWYRKAADQGYGDAQYNLGWMYHNGRGIKKDYDQAMDWYLKAAYQGDAGAQNNIGD
MYEKGAGVSKDNVKAAKWYLKAANQGYALAQNSLGLMYFEGRGVLQDKKQSRDWYSKACDNGDQPSCDQYAY

Sequences:

>Translated_232_residues
MNLQTLRQMFLYRLIVLGLLVGLEVPVVAADFTTTSVQANQGRASAQFNLGVMYDEGSGIAQDTAKAFEWYQKAAEQGNA
SAQFNIGWMYEHADGVSQDSVKAVEWYRKAADQGYGDAQYNLGWMYHNGRGIKKDYDQAMDWYLKAAYQGDAGAQNNIGD
MYEKGAGVSKDNVKAAKWYLKAANQGYALAQNSLGLMYFEGRGVLQDKKQSRDWYSKACDNGDQPSCDQYAY
>Mature_232_residues
MNLQTLRQMFLYRLIVLGLLVGLEVPVVAADFTTTSVQANQGRASAQFNLGVMYDEGSGIAQDTAKAFEWYQKAAEQGNA
SAQFNIGWMYEHADGVSQDSVKAVEWYRKAADQGYGDAQYNLGWMYHNGRGIKKDYDQAMDWYLKAAYQGDAGAQNNIGD
MYEKGAGVSKDNVKAAKWYLKAANQGYALAQNSLGLMYFEGRGVLQDKKQSRDWYSKACDNGDQPSCDQYAY

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=186, Percent_Identity=34.9462365591398, Blast_Score=104, Evalue=8e-23,
Organism=Homo sapiens, GI151301150, Length=186, Percent_Identity=33.8709677419355, Blast_Score=94, Evalue=9e-20,
Organism=Homo sapiens, GI217330658, Length=165, Percent_Identity=30.9090909090909, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI217330656, Length=165, Percent_Identity=30.9090909090909, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI33620759, Length=171, Percent_Identity=29.8245614035088, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI154689719, Length=153, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI87081769, Length=199, Percent_Identity=44.2211055276382, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1786867, Length=115, Percent_Identity=42.6086956521739, Blast_Score=95, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17563256, Length=192, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6319410, Length=198, Percent_Identity=29.7979797979798, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21355295, Length=186, Percent_Identity=32.7956989247312, Blast_Score=88, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 25862; Mature: 25862

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQTLRQMFLYRLIVLGLLVGLEVPVVAADFTTTSVQANQGRASAQFNLGVMYDEGSGI
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCEEEEEEEEEECCCCC
AQDTAKAFEWYQKAAEQGNASAQFNIGWMYEHADGVSQDSVKAVEWYRKAADQGYGDAQY
HHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCE
NLGWMYHNGRGIKKDYDQAMDWYLKAAYQGDAGAQNNIGDMYEKGAGVSKDNVKAAKWYL
EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHH
KAANQGYALAQNSLGLMYFEGRGVLQDKKQSRDWYSKACDNGDQPSCDQYAY
HHCCCCCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNLQTLRQMFLYRLIVLGLLVGLEVPVVAADFTTTSVQANQGRASAQFNLGVMYDEGSGI
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCEEEEEEEEEECCCCC
AQDTAKAFEWYQKAAEQGNASAQFNIGWMYEHADGVSQDSVKAVEWYRKAADQGYGDAQY
HHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCE
NLGWMYHNGRGIKKDYDQAMDWYLKAAYQGDAGAQNNIGDMYEKGAGVSKDNVKAAKWYL
EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHH
KAANQGYALAQNSLGLMYFEGRGVLQDKKQSRDWYSKACDNGDQPSCDQYAY
HHCCCCCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]