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The map label for this gene is yqjF [H]

Identifier: 93006368

GI number: 93006368

Start: 1896088

End: 1896477

Strand: Direct

Name: yqjF [H]

Synonym: Pcryo_1542

Alternate gene names: 93006368

Gene position: 1896088-1896477 (Clockwise)

Preceding gene: 93006366

Following gene: 93006369

Centisome position: 61.97

GC content: 41.03

Gene sequence:

>390_bases
ATGGATAAATTACAAGAGCTTAGCGCCCCAATTGGTCGCCTATTTTTATCAATGATTTTTATCTTTTCAGGCTTTACCAA
AATCACAGGCTACGCTGCTACTCAAGGTTATATGGAGTCGATGGGCGTACCGGGTATGCTATTACCGTTGGTGATTGCCC
TTGAGTTATTTGGTGGCATTGCTATTTTGCTTGGTTTTAAAGCACGCCTGATTGCGTTATTGTTCGTGGGTTTTAACATT
ATATCAGCACTGCTTTTCCATCAGTTCTGGATTGATGAATCACAAATGAACCCGTTTATGAAAAACATCGCGATAGCAGG
TGGTTTCTTAATGATTTTTGCTCATGGTGCAGGCGCTTATTCGATTGATCACAGCAACACGCGTAGATAA

Upstream 100 bases:

>100_bases
TTACGGTTTATCTATACATGGTCAACAATTAAAATATAATCATTACTTAGCGACATACAAACGATTTAGATCCACATTGT
GACATTTTTGGAGAATTACT

Downstream 100 bases:

>100_bases
CTGCCTATAACTAAAAGTAAGAAAACAATGGTTAAACGTGTATTTATACTCACTTATACTTATGACAGCTCCTTATCATG
ACAACTAACGCTCACAGCCC

Product: DoxX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MDKLQELSAPIGRLFLSMIFIFSGFTKITGYAATQGYMESMGVPGMLLPLVIALELFGGIAILLGFKARLIALLFVGFNI
ISALLFHQFWIDESQMNPFMKNIAIAGGFLMIFAHGAGAYSIDHSNTRR

Sequences:

>Translated_129_residues
MDKLQELSAPIGRLFLSMIFIFSGFTKITGYAATQGYMESMGVPGMLLPLVIALELFGGIAILLGFKARLIALLFVGFNI
ISALLFHQFWIDESQMNPFMKNIAIAGGFLMIFAHGAGAYSIDHSNTRR
>Mature_129_residues
MDKLQELSAPIGRLFLSMIFIFSGFTKITGYAATQGYMESMGVPGMLLPLVIALELFGGIAILLGFKARLIALLFVGFNI
ISALLFHQFWIDESQMNPFMKNIAIAGGFLMIFAHGAGAYSIDHSNTRR

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI87082210, Length=129, Percent_Identity=48.062015503876, Blast_Score=121, Evalue=2e-29,
Organism=Escherichia coli, GI145693171, Length=122, Percent_Identity=36.8852459016393, Blast_Score=72, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14167; Mature: 14167

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLQELSAPIGRLFLSMIFIFSGFTKITGYAATQGYMESMGVPGMLLPLVIALELFGGI
CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AILLGFKARLIALLFVGFNIISALLFHQFWIDESQMNPFMKNIAIAGGFLMIFAHGAGAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHEECCCCCE
SIDHSNTRR
EECCCCCCC
>Mature Secondary Structure
MDKLQELSAPIGRLFLSMIFIFSGFTKITGYAATQGYMESMGVPGMLLPLVIALELFGGI
CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AILLGFKARLIALLFVGFNIISALLFHQFWIDESQMNPFMKNIAIAGGFLMIFAHGAGAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHEECCCCCE
SIDHSNTRR
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]