| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is xcpX [H]
Identifier: 93006353
GI number: 93006353
Start: 1878356
End: 1879429
Strand: Reverse
Name: xcpX [H]
Synonym: Pcryo_1527
Alternate gene names: 93006353
Gene position: 1879429-1878356 (Counterclockwise)
Preceding gene: 93006354
Following gene: 93006349
Centisome position: 61.42
GC content: 42.55
Gene sequence:
>1074_bases ATGCCAAGCATGCCAGTTATGCCCATGAAAGTCGACTCTCAGCGTGGTGTCGCGCTACTTACCATTTTATTACTAGTGGT TAGTATTACGGTGGTTGCAGGGGCGATACTTGCCAGCCAAAAAATTGCGATTAGACGCAGTGGTTTGTTGTTTGATCAAA ACCAGCTCTTACAAGATATCGATGCCGGTCAGCAACTAGCGGTTACGATGATTCGTGCCGATGCTAATCTAAATGACACT GATAGTACGCAAGATATCTGGGCAAAGCCTGTACCCCCTTATACCTTGGGCACACATAGTATTGGCATTGAAATACGTGA TGAAGCCAGTCGCTTTAATATCAATAATTTATATCAAAACGGCGCAGTTGATAGTAATGCTTTGGCAGTATTGCAACGGC TATTAATCCAATTGAATTTGGCGCCAGATATTGCTATTGCTGTTCTTGATTATCAAGATGCAGACAGTGAGGTTTATCAA GATGGCGGCGATGAAAGTACGGTTTATAACCAGCAGTCTAATAGCTCAGCGGATAACGATTTGCCCAATCAACGATTGGT CAATATTGATCAGCTGCAAAATGTAAAAGGCATCAATGCGGAAGTATTGGCAGTGCTACGACCTTACATCACAGTAGTGC CACATTATTTACCTATTAATATGAATACAGCCAGTCCGGTGATACTTGCTGCTCTAATCGACGGCGCAACTAGCCAGAAA ATGCAAACCATCGTTGACCTGCGGGAAAAGCAAGTATTCGAATCTATTGATGAGATATGGCAGCTGCCAATATTAAGCAG TTTGGATAATAAGCAACGAAAAGTAATAGCGCCACTCTTGGCGGTTGATAGCCAAGCTTTTACGGCACTTATCACTGCTA CGGATAATGCAACTGTTGGTCAAGCAAGACAACGCTATGCAACCATCATGATTAGCAAGACTGCTACTGATGTTACGGAA AATAGCAATAACGTCGATAATGCTAATAGCAATAATAAAAACGCTGATAACAAAAAGCCCAAAGAGGTTCGCGTGTTGAC GCAACGACTTTGGGCATTTCGACCGAATTTTTGA
Upstream 100 bases:
>100_bases CAACGGCAACGGCAACGGCAACGGCAATAGTAATGGCGCAAGTAACAATGATGCAGCCAATGGCAATGTAGATAATAATT CAGGGAATGGAATTTAATAT
Downstream 100 bases:
>100_bases TGATTATCACTAAACGATAATCATCAAAAACAACCAAATATATGTCTTATTAATCACTTAAATGAGTTTCTTCAGTAGAT TTCCAATTATAAGCGCCATA
Product: general secretion pathway protein K
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MPSMPVMPMKVDSQRGVALLTILLLVVSITVVAGAILASQKIAIRRSGLLFDQNQLLQDIDAGQQLAVTMIRADANLNDT DSTQDIWAKPVPPYTLGTHSIGIEIRDEASRFNINNLYQNGAVDSNALAVLQRLLIQLNLAPDIAIAVLDYQDADSEVYQ DGGDESTVYNQQSNSSADNDLPNQRLVNIDQLQNVKGINAEVLAVLRPYITVVPHYLPINMNTASPVILAALIDGATSQK MQTIVDLREKQVFESIDEIWQLPILSSLDNKQRKVIAPLLAVDSQAFTALITATDNATVGQARQRYATIMISKTATDVTE NSNNVDNANSNNKNADNKKPKEVRVLTQRLWAFRPNF
Sequences:
>Translated_357_residues MPSMPVMPMKVDSQRGVALLTILLLVVSITVVAGAILASQKIAIRRSGLLFDQNQLLQDIDAGQQLAVTMIRADANLNDT DSTQDIWAKPVPPYTLGTHSIGIEIRDEASRFNINNLYQNGAVDSNALAVLQRLLIQLNLAPDIAIAVLDYQDADSEVYQ DGGDESTVYNQQSNSSADNDLPNQRLVNIDQLQNVKGINAEVLAVLRPYITVVPHYLPINMNTASPVILAALIDGATSQK MQTIVDLREKQVFESIDEIWQLPILSSLDNKQRKVIAPLLAVDSQAFTALITATDNATVGQARQRYATIMISKTATDVTE NSNNVDNANSNNKNADNKKPKEVRVLTQRLWAFRPNF >Mature_356_residues PSMPVMPMKVDSQRGVALLTILLLVVSITVVAGAILASQKIAIRRSGLLFDQNQLLQDIDAGQQLAVTMIRADANLNDTD STQDIWAKPVPPYTLGTHSIGIEIRDEASRFNINNLYQNGAVDSNALAVLQRLLIQLNLAPDIAIAVLDYQDADSEVYQD GGDESTVYNQQSNSSADNDLPNQRLVNIDQLQNVKGINAEVLAVLRPYITVVPHYLPINMNTASPVILAALIDGATSQKM QTIVDLREKQVFESIDEIWQLPILSSLDNKQRKVIAPLLAVDSQAFTALITATDNATVGQARQRYATIMISKTATDVTEN SNNVDNANSNNKNADNKKPKEVRVLTQRLWAFRPNF
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3156
COG function: function code U; Type II secretory pathway, component PulK
Gene ontology:
Cell location: Cell inner membrane (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP K family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005628 [H]
Pfam domain/function: PF03934 GspK [H]
EC number: NA
Molecular weight: Translated: 39201; Mature: 39070
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSMPVMPMKVDSQRGVALLTILLLVVSITVVAGAILASQKIAIRRSGLLFDQNQLLQDI CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHH DAGQQLAVTMIRADANLNDTDSTQDIWAKPVPPYTLGTHSIGIEIRDEASRFNINNLYQN CCCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCC GAVDSNALAVLQRLLIQLNLAPDIAIAVLDYQDADSEVYQDGGDESTVYNQQSNSSADND CCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCCCCEECCCCCCCCCCC LPNQRLVNIDQLQNVKGINAEVLAVLRPYITVVPHYLPINMNTASPVILAALIDGATSQK CCCCCEECHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHH MQTIVDLREKQVFESIDEIWQLPILSSLDNKQRKVIAPLLAVDSQAFTALITATDNATVG HHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHH QARQRYATIMISKTATDVTENSNNVDNANSNNKNADNKKPKEVRVLTQRLWAFRPNF HHHHHHEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PSMPVMPMKVDSQRGVALLTILLLVVSITVVAGAILASQKIAIRRSGLLFDQNQLLQDI CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHH DAGQQLAVTMIRADANLNDTDSTQDIWAKPVPPYTLGTHSIGIEIRDEASRFNINNLYQN CCCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCC GAVDSNALAVLQRLLIQLNLAPDIAIAVLDYQDADSEVYQDGGDESTVYNQQSNSSADND CCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCCCCEECCCCCCCCCCC LPNQRLVNIDQLQNVKGINAEVLAVLRPYITVVPHYLPINMNTASPVILAALIDGATSQK CCCCCEECHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHH MQTIVDLREKQVFESIDEIWQLPILSSLDNKQRKVIAPLLAVDSQAFTALITATDNATVG HHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHH QARQRYATIMISKTATDVTENSNNVDNANSNNKNADNKKPKEVRVLTQRLWAFRPNF HHHHHHEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1588814; 10984043 [H]