| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is engD [H]
Identifier: 93006350
GI number: 93006350
Start: 1874882
End: 1875973
Strand: Direct
Name: engD [H]
Synonym: Pcryo_1524
Alternate gene names: 93006350
Gene position: 1874882-1875973 (Clockwise)
Preceding gene: 93006348
Following gene: 93006351
Centisome position: 61.27
GC content: 46.61
Gene sequence:
>1092_bases ATGGGTTTTAATTGCGGCATCGTCGGTCTACCAAACGTGGGTAAATCCACCCTGTTTAACGCCTTGACCAAAGCGGGTAT CGCCGCTGAAAACTTTCCATTTTGTACCAAAGATCCCAATACGGGTATCGTTCCAGTGCCTGACCCACGCCTAAAGAAAC TGGCTGATATCGTTAACCCTGAGCGCGTACTACCAACGACGATGGAATTTGTTGATATCGCAGGTTTGGTCGCTGGTGCG TCAAAAGGCGAAGGCATGGGCAACCAATTCTTAGCCAATATCCGTGAGACCGATGCGATTGCGCACGTGGTACGCTGTTT TGATGATGACAACGTCGTACACGTTGATGGTCGCGTTAGCCCTATCGACGACATCGAGACCATCAATACTGAATTGGCAT TAGCCGATTTAGAAGCGGTTGAGCGCGCGATCTTTAACTTGACCAAAAAAGCCAAAGGCGGTGATAAAGACGCTGGCGCT ATGCTTGATATTTTTAAGAAAATCGAGCCATTATTAGCAGAAGGTCAAGCCGCACGCGCCGCCAATCTTGATGCTGATGA GAAAAAACTCATCAGGAGCTATGGTTTAATTACTCTGAAGCCTACCATGTATATCGCTAACGTGAGCGAAGATGGCTTTG AGAATAATCCATATCTTGATGCCGTACGCAACTATGCCACTGGCGAAGATTCTATCGTTATCGCATTGTGTAACCAAATC GAATCTGAAATTGCCCAGCTTGATGAAGATGATAAAAAAGACTTCTTGGCTGAAATGGACATGCTCGAGGCCGGTCTTGA CCAAGTGATTCGCGGTGGTTATGATTTGCTTGATATGCAGACTTACTTTACCGCTGGTGTAAAAGAAGTGCGTGCATGGA CAGTCGCTGTTGGCGCAACCGCACCTCAGGCAGCTGGTGTGATTCATACGGATTTTGAGCGTGGCTTTATTCGCGCTGAA GTCATTGCTTATGACGACTTTATCGAACATAACGGCGAAAAAGGTGCTGCTGCTGCCGGTAAATCACGCTTAGAAGGCAA GACTTATATCGTACAAGATGGCGATGTGATGCATTTCCGTTTTAATGTTTAA
Upstream 100 bases:
>100_bases ACCCATATTCGGTTAAATTTGCTACAATACGCCCAATTTTGATTTACTATTTTACTAAGTCTTATATCAACTGATTTTAT CAATATATTGAGAGCATGTT
Downstream 100 bases:
>100_bases TGCTTAACCTTTAATACTACACAGCATGTTTACACAGTCTTAGCATAGAACAACCAAAAGCCAGTCTTGATGCTGGCTTT TTTTATTATACTGGGAGCGA
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MGFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKKLADIVNPERVLPTTMEFVDIAGLVAGA SKGEGMGNQFLANIRETDAIAHVVRCFDDDNVVHVDGRVSPIDDIETINTELALADLEAVERAIFNLTKKAKGGDKDAGA MLDIFKKIEPLLAEGQAARAANLDADEKKLIRSYGLITLKPTMYIANVSEDGFENNPYLDAVRNYATGEDSIVIALCNQI ESEIAQLDEDDKKDFLAEMDMLEAGLDQVIRGGYDLLDMQTYFTAGVKEVRAWTVAVGATAPQAAGVIHTDFERGFIRAE VIAYDDFIEHNGEKGAAAAGKSRLEGKTYIVQDGDVMHFRFNV
Sequences:
>Translated_363_residues MGFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKKLADIVNPERVLPTTMEFVDIAGLVAGA SKGEGMGNQFLANIRETDAIAHVVRCFDDDNVVHVDGRVSPIDDIETINTELALADLEAVERAIFNLTKKAKGGDKDAGA MLDIFKKIEPLLAEGQAARAANLDADEKKLIRSYGLITLKPTMYIANVSEDGFENNPYLDAVRNYATGEDSIVIALCNQI ESEIAQLDEDDKKDFLAEMDMLEAGLDQVIRGGYDLLDMQTYFTAGVKEVRAWTVAVGATAPQAAGVIHTDFERGFIRAE VIAYDDFIEHNGEKGAAAAGKSRLEGKTYIVQDGDVMHFRFNV >Mature_362_residues GFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKKLADIVNPERVLPTTMEFVDIAGLVAGAS KGEGMGNQFLANIRETDAIAHVVRCFDDDNVVHVDGRVSPIDDIETINTELALADLEAVERAIFNLTKKAKGGDKDAGAM LDIFKKIEPLLAEGQAARAANLDADEKKLIRSYGLITLKPTMYIANVSEDGFENNPYLDAVRNYATGEDSIVIALCNQIE SEIAQLDEDDKKDFLAEMDMLEAGLDQVIRGGYDLLDMQTYFTAGVKEVRAWTVAVGATAPQAAGVIHTDFERGFIRAEV IAYDDFIEHNGEKGAAAAGKSRLEGKTYIVQDGDVMHFRFNV
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=365, Percent_Identity=43.013698630137, Blast_Score=301, Evalue=4e-82, Organism=Homo sapiens, GI58761502, Length=218, Percent_Identity=36.2385321100917, Blast_Score=155, Evalue=6e-38, Organism=Escherichia coli, GI1787454, Length=363, Percent_Identity=67.7685950413223, Blast_Score=521, Evalue=1e-149, Organism=Caenorhabditis elegans, GI17509631, Length=365, Percent_Identity=40.5479452054795, Blast_Score=287, Evalue=5e-78, Organism=Saccharomyces cerevisiae, GI6319499, Length=371, Percent_Identity=39.0835579514825, Blast_Score=254, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6321773, Length=382, Percent_Identity=32.4607329842932, Blast_Score=196, Evalue=6e-51, Organism=Saccharomyces cerevisiae, GI6321649, Length=145, Percent_Identity=39.3103448275862, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI24640873, Length=363, Percent_Identity=41.8732782369146, Blast_Score=289, Evalue=2e-78, Organism=Drosophila melanogaster, GI24640877, Length=363, Percent_Identity=41.8732782369146, Blast_Score=289, Evalue=2e-78, Organism=Drosophila melanogaster, GI24640875, Length=363, Percent_Identity=41.8732782369146, Blast_Score=289, Evalue=2e-78, Organism=Drosophila melanogaster, GI24640879, Length=328, Percent_Identity=39.0243902439024, Blast_Score=236, Evalue=2e-62,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 39336; Mature: 39205
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKKLADIVNP CCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCC ERVLPTTMEFVDIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDDNVVHVDGRVS CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC PIDDIETINTELALADLEAVERAIFNLTKKAKGGDKDAGAMLDIFKKIEPLLAEGQAARA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHH ANLDADEKKLIRSYGLITLKPTMYIANVSEDGFENNPYLDAVRNYATGEDSIVIALCNQI CCCCCHHHHHHHHCCCEEEECEEEEEECCCCCCCCCCHHHHHHHCCCCCCCEEEHHHHHH ESEIAQLDEDDKKDFLAEMDMLEAGLDQVIRGGYDLLDMQTYFTAGVKEVRAWTVAVGAT HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEECCC APQAAGVIHTDFERGFIRAEVIAYDDFIEHNGEKGAAAAGKSRLEGKTYIVQDGDVMHFR CCCCCCCEEECCCCCCEEEEEEEHHHHHHHCCCCCCHHCCHHHCCCCEEEEECCCEEEEE FNV ECC >Mature Secondary Structure GFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKKLADIVNP CCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCC ERVLPTTMEFVDIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDDNVVHVDGRVS CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC PIDDIETINTELALADLEAVERAIFNLTKKAKGGDKDAGAMLDIFKKIEPLLAEGQAARA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHH ANLDADEKKLIRSYGLITLKPTMYIANVSEDGFENNPYLDAVRNYATGEDSIVIALCNQI CCCCCHHHHHHHHCCCEEEECEEEEEECCCCCCCCCCHHHHHHHCCCCCCCEEEHHHHHH ESEIAQLDEDDKKDFLAEMDMLEAGLDQVIRGGYDLLDMQTYFTAGVKEVRAWTVAVGAT HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEECCC APQAAGVIHTDFERGFIRAEVIAYDDFIEHNGEKGAAAAGKSRLEGKTYIVQDGDVMHFR CCCCCCCEEECCCCCCEEEEEEEHHHHHHHCCCCCCHHCCHHHCCCCEEEEECCCEEEEE FNV ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA