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The map label for this gene is nsrR [H]

Identifier: 93006349

GI number: 93006349

Start: 1873847

End: 1874392

Strand: Reverse

Name: nsrR [H]

Synonym: Pcryo_1523

Alternate gene names: 93006349

Gene position: 1874392-1873847 (Counterclockwise)

Preceding gene: 93006353

Following gene: 93006346

Centisome position: 61.26

GC content: 41.21

Gene sequence:

>546_bases
GTGCGATTGACCAATTACAGTGATTATGCACTGCGCTCGTTAATATATTTGGCCACTAAGCCCGAGCCGACGCTATTGGC
AAATATCAGTGATATTGCCAATAGTTATCATATATCTAAAAGTCATTTGACCAAGATTATCCAGCAGCTCGGACAGCTTG
GTTATATCGATAGTGTGCGCGGTAAGAATGGCGGTATTCGCTTAGCGCACGCGCCAAAAGACATTAATTTGGGTGAATTG
ATTAAAAAGATAGAGCCGGATTTTGCTTTGGTTGAGTGCTTTTCTACAAACTCATTGGACAGCTCGATCGCTGATATTAA
TAGTGCTGTAATAAATGATGAAAAGAACGCTAGCGCCAACGATATGTCATTAAAACTGATTGATGAAACTGTAAGTCACA
TAGCTTCAGGCTGTATTATCAGTCCGGTCTGTCAGCTAAAACAGGTGCTTGCTGAAGCGTTGACAGCATTTATTGCCGTG
CTTGAACGCTATACATTGGCAGACATTATCGAGAATAAGGATGAGCTTGCAGCGTTATTATCATAA

Upstream 100 bases:

>100_bases
CAATCCATTTCTTTTTATAAAGCGGTTTTAAATCACTTTACTTATCTAGCATAGCCCTTAGAATAAATGAATAACCCATT
AGAAATAGGAGCACTTTAAG

Downstream 100 bases:

>100_bases
TTTTCATAACATATTTTCTCTATTTTGAAAGGCAATTTAAATAAGACAGGATGTTATGATCTACTTAGCATCATTGTGAA
GTTACTATTAATAGTATGCC

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MRLTNYSDYALRSLIYLATKPEPTLLANISDIANSYHISKSHLTKIIQQLGQLGYIDSVRGKNGGIRLAHAPKDINLGEL
IKKIEPDFALVECFSTNSLDSSIADINSAVINDEKNASANDMSLKLIDETVSHIASGCIISPVCQLKQVLAEALTAFIAV
LERYTLADIIENKDELAALLS

Sequences:

>Translated_181_residues
MRLTNYSDYALRSLIYLATKPEPTLLANISDIANSYHISKSHLTKIIQQLGQLGYIDSVRGKNGGIRLAHAPKDINLGEL
IKKIEPDFALVECFSTNSLDSSIADINSAVINDEKNASANDMSLKLIDETVSHIASGCIISPVCQLKQVLAEALTAFIAV
LERYTLADIIENKDELAALLS
>Mature_181_residues
MRLTNYSDYALRSLIYLATKPEPTLLANISDIANSYHISKSHLTKIIQQLGQLGYIDSVRGKNGGIRLAHAPKDINLGEL
IKKIEPDFALVECFSTNSLDSSIADINSAVINDEKNASANDMSLKLIDETVSHIASGCIISPVCQLKQVLAEALTAFIAV
LERYTLADIIENKDELAALLS

Specific function: Nitric oxide-responsive transcriptional regulator [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=180, Percent_Identity=35, Blast_Score=117, Evalue=4e-28,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 19716; Mature: 19716

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTNYSDYALRSLIYLATKPEPTLLANISDIANSYHISKSHLTKIIQQLGQLGYIDSVR
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCCC
GKNGGIRLAHAPKDINLGELIKKIEPDFALVECFSTNSLDSSIADINSAVINDEKNASAN
CCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
DMSLKLIDETVSHIASGCIISPVCQLKQVLAEALTAFIAVLERYTLADIIENKDELAALL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC
S
C
>Mature Secondary Structure
MRLTNYSDYALRSLIYLATKPEPTLLANISDIANSYHISKSHLTKIIQQLGQLGYIDSVR
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCCC
GKNGGIRLAHAPKDINLGELIKKIEPDFALVECFSTNSLDSSIADINSAVINDEKNASAN
CCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
DMSLKLIDETVSHIASGCIISPVCQLKQVLAEALTAFIAVLERYTLADIIENKDELAALL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA