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The map label for this gene is ynfM [H]

Identifier: 93006346

GI number: 93006346

Start: 1870354

End: 1871592

Strand: Reverse

Name: ynfM [H]

Synonym: Pcryo_1520

Alternate gene names: 93006346

Gene position: 1871592-1870354 (Counterclockwise)

Preceding gene: 93006349

Following gene: 93006345

Centisome position: 61.17

GC content: 46.49

Gene sequence:

>1239_bases
ATGAGCCTTTTTATAGTCAGTACTCTTTTGAATAATCATATAAATAACAACACGACAAAGATACCCTTTGATTCGCCTTC
ATGGGTGCTGAAGTTAACTATTGGTCTGATTGGGATGTTCGCCTTTTTGCAGGTGTATTCTATTCAAGCGGTATTGCCAG
TATTGATGGTAGATTTTTCAGCGACTGAAGTGCAGGCAGGGATGGTTGTTGGCGCAACAGTGATGGCGATTGCCATTATG
TCACCGTTTTTAGGGATGCTATCTGATGCGGTCGGGCGCAAATCTTTTATCGTTGGGGCATTGTTGTTTTTAGCGATACC
TACTGCTTTAATCGCCCAAAGTCCTAGTATTGGCTGGCTCGGTATGTGGCGCTTTATGCAAGGATTGTCTGTCCCAGGCA
TTACGGTTGTGACCATTGCCTATATCGGTGAGGAGTTCGAGGGGCGAGCTGTCACAGAGCTTATGTCATTCTATGTCTCA
GGCTCGGTACTTGGCGGCTTTATGGGGCGGTTCTTGCTGGGGCATCTGCACGAGTTTATTGGCTGGCGTGCAGGCTATTA
TGTGATGGCAGCGATGACGCTTATCGGTGCACTATGGGTTGGCAAGATGTTGCCATCGTCGCGGCATTTTGTAGCCAATC
CAAATTTTCGCTCAGCGATGCAGACGCTTGGTGAGCATTTGACCAATCGTTATGTGGTAACCGCATGTTTGCTCGGCGCT
TGTGTGCTTTTTTCGCTCGTTGGTTGCTTTACCTTTATCAATCTACATCTTGCTGGCACGCCTTATGAGCTTAGCACTGG
CGCGCTTGCCAATATTTTTGCGGTGTATTTAATCGGAGTGATTATCACGCCATTGTCGACGACATTATTACGTCGATTTG
GGGCAGCACGCACCGTTCGAGTGGCAGTAATTTTTTCGATGCTTGGTGCGTTATTAACGCTGGTCACGCCATTATGGGGC
ATTATTATTGGGCTTGCCATTATGTCGTCAGGCGTTTTTGTTACCCAAGCGGCAACCATTAGCTATATCGCCGTCAATGT
CAAAAACGGACGTTCATTAGCCTCAGGTTTATATTACATGGCTTATTATGCGGGCGGCACGATGGGTGCATGGCTGTGCG
GTATCGTTTATGCACGTGGACAATGGTCATTAACCGTTTGGCTATTATTATTTGTACAAGTATTGGCACTTTTGGTCGCA
AGTTTTGGCATGATAAAAACAAAATCGCGTCCTGCTTAA

Upstream 100 bases:

>100_bases
TTTTTTTGATGTTAAGTCATGATTTTTACAGTTGTTAGATTAGATATTTTATGTACTATTGCCATATTTCTATTACCCAC
GCCCAATTAGCCTAAGCTAA

Downstream 100 bases:

>100_bases
TGCCAGACAAGCTAACACCAGACAAACCAACAGAAGAGATAAAATAAGCTATCACAAGCTAAGCAACTGAGAAACGATTA
TTTTCGAACGATGAGTATTG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MSLFIVSTLLNNHINNNTTKIPFDSPSWVLKLTIGLIGMFAFLQVYSIQAVLPVLMVDFSATEVQAGMVVGATVMAIAIM
SPFLGMLSDAVGRKSFIVGALLFLAIPTALIAQSPSIGWLGMWRFMQGLSVPGITVVTIAYIGEEFEGRAVTELMSFYVS
GSVLGGFMGRFLLGHLHEFIGWRAGYYVMAAMTLIGALWVGKMLPSSRHFVANPNFRSAMQTLGEHLTNRYVVTACLLGA
CVLFSLVGCFTFINLHLAGTPYELSTGALANIFAVYLIGVIITPLSTTLLRRFGAARTVRVAVIFSMLGALLTLVTPLWG
IIIGLAIMSSGVFVTQAATISYIAVNVKNGRSLASGLYYMAYYAGGTMGAWLCGIVYARGQWSLTVWLLLFVQVLALLVA
SFGMIKTKSRPA

Sequences:

>Translated_412_residues
MSLFIVSTLLNNHINNNTTKIPFDSPSWVLKLTIGLIGMFAFLQVYSIQAVLPVLMVDFSATEVQAGMVVGATVMAIAIM
SPFLGMLSDAVGRKSFIVGALLFLAIPTALIAQSPSIGWLGMWRFMQGLSVPGITVVTIAYIGEEFEGRAVTELMSFYVS
GSVLGGFMGRFLLGHLHEFIGWRAGYYVMAAMTLIGALWVGKMLPSSRHFVANPNFRSAMQTLGEHLTNRYVVTACLLGA
CVLFSLVGCFTFINLHLAGTPYELSTGALANIFAVYLIGVIITPLSTTLLRRFGAARTVRVAVIFSMLGALLTLVTPLWG
IIIGLAIMSSGVFVTQAATISYIAVNVKNGRSLASGLYYMAYYAGGTMGAWLCGIVYARGQWSLTVWLLLFVQVLALLVA
SFGMIKTKSRPA
>Mature_411_residues
SLFIVSTLLNNHINNNTTKIPFDSPSWVLKLTIGLIGMFAFLQVYSIQAVLPVLMVDFSATEVQAGMVVGATVMAIAIMS
PFLGMLSDAVGRKSFIVGALLFLAIPTALIAQSPSIGWLGMWRFMQGLSVPGITVVTIAYIGEEFEGRAVTELMSFYVSG
SVLGGFMGRFLLGHLHEFIGWRAGYYVMAAMTLIGALWVGKMLPSSRHFVANPNFRSAMQTLGEHLTNRYVVTACLLGAC
VLFSLVGCFTFINLHLAGTPYELSTGALANIFAVYLIGVIITPLSTTLLRRFGAARTVRVAVIFSMLGALLTLVTPLWGI
IIGLAIMSSGVFVTQAATISYIAVNVKNGRSLASGLYYMAYYAGGTMGAWLCGIVYARGQWSLTVWLLLFVQVLALLVAS
FGMIKTKSRPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=413, Percent_Identity=28.3292978208232, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI87082404, Length=209, Percent_Identity=23.9234449760766, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44386; Mature: 44254

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC
>Mature Secondary Structure 
SLFIVSTLLNNHINNNTTKIPFDSPSWVLKLTIGLIGMFAFLQVYSIQAVLPVLMVDFS
CHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ATEVQAGMVVGATVMAIAIMSPFLGMLSDAVGRKSFIVGALLFLAIPTALIAQSPSIGWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
GMWRFMQGLSVPGITVVTIAYIGEEFEGRAVTELMSFYVSGSVLGGFMGRFLLGHLHEFI
HHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWRAGYYVMAAMTLIGALWVGKMLPSSRHFVANPNFRSAMQTLGEHLTNRYVVTACLLGA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
CVLFSLVGCFTFINLHLAGTPYELSTGALANIFAVYLIGVIITPLSTTLLRRFGAARTVR
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VAVIFSMLGALLTLVTPLWGIIIGLAIMSSGVFVTQAATISYIAVNVKNGRSLASGLYYM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHEEEEEEEEECCCHHHHHHHHHH
AYYAGGTMGAWLCGIVYARGQWSLTVWLLLFVQVLALLVASFGMIKTKSRPA
HHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]