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The map label for this gene is yebC [C]

Identifier: 93006305

GI number: 93006305

Start: 1819345

End: 1820094

Strand: Direct

Name: yebC [C]

Synonym: Pcryo_1479

Alternate gene names: 93006305

Gene position: 1819345-1820094 (Clockwise)

Preceding gene: 93006303

Following gene: 93006308

Centisome position: 59.46

GC content: 43.47

Gene sequence:

>750_bases
ATGGCAGGCCATTCAAAATGGGCAAATATCAAACACCGTAAAGCCCGTCAGGATGCGGTAAAAGGTAAAGTATTTACCAA
AATTATTCGTGAAATTGTTTCTGCTGCCAAGCAAGGTGATCCTGACCCTGATAAGAATCCGCGCCTACGTGCGGTTATTG
AAAAAGCCCTCTCCGTCAATATGACAAGAGACACCATCAATCGTGCGGTAGCTCGTGGTACAGGCGGTGATGACAATGAC
AATATGGACGAAGTCAGCTATGAAGGTTATGGCATCGGCGGCGTCGCAGTATTAGTCGAAACCATGACTGACAATCTCAA
TCGGACAGTCAGTGAAGTACGCCATGCTTTTACCAAAAATGATGGCAATCTGGGTACTACTGGCTCTGTGGCTTACCTAT
TCAATAAACGCGGTGAAATAAGCTTTAATGACACAAGTTTAGAAGATGAAGTTATGCTAGTGGCATTAGATGCAGGTGCG
CTTGATATCGAAAATGATGGCGAAAGCTTGCTTGTCATCACTGAGTGGGAAAATTTCGGTCATGTTAAAGACGCGCTTAA
TGCTGCTGGTTTAGTCTCTGACAATGCTGAAGTAACTATGTCGCCATCAACCAGTGCTGAAATAGACAACGTTGCAGATG
CCGAAAAAGTCATGAAGATGATTGATATGTTAGAAGATATTGATGATGTGCAAGAAGTTTATAGCAACGTCAATTTCTCA
GACGAAGTCATGGCGCAACTTGAGCAGTAA

Upstream 100 bases:

>100_bases
AGCGCAATCAGGTAATAAAAACTGCATTAACTATAAAAAATTTTTACCAATAAATGTTTTAGCTGTACAATACATCACTC
GTAATACTTAAGGACGTCAT

Downstream 100 bases:

>100_bases
TTTTTGTGCTTTGTATTAAAAAAGCCAAACGTTTTTAGCGTTTGGCTTTTTTGTTCAACAATATGTGACATGTGACGAGC
AATTACTTCAAACTAAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MAGHSKWANIKHRKARQDAVKGKVFTKIIREIVSAAKQGDPDPDKNPRLRAVIEKALSVNMTRDTINRAVARGTGGDDND
NMDEVSYEGYGIGGVAVLVETMTDNLNRTVSEVRHAFTKNDGNLGTTGSVAYLFNKRGEISFNDTSLEDEVMLVALDAGA
LDIENDGESLLVITEWENFGHVKDALNAAGLVSDNAEVTMSPSTSAEIDNVADAEKVMKMIDMLEDIDDVQEVYSNVNFS
DEVMAQLEQ

Sequences:

>Translated_249_residues
MAGHSKWANIKHRKARQDAVKGKVFTKIIREIVSAAKQGDPDPDKNPRLRAVIEKALSVNMTRDTINRAVARGTGGDDND
NMDEVSYEGYGIGGVAVLVETMTDNLNRTVSEVRHAFTKNDGNLGTTGSVAYLFNKRGEISFNDTSLEDEVMLVALDAGA
LDIENDGESLLVITEWENFGHVKDALNAAGLVSDNAEVTMSPSTSAEIDNVADAEKVMKMIDMLEDIDDVQEVYSNVNFS
DEVMAQLEQ
>Mature_248_residues
AGHSKWANIKHRKARQDAVKGKVFTKIIREIVSAAKQGDPDPDKNPRLRAVIEKALSVNMTRDTINRAVARGTGGDDNDN
MDEVSYEGYGIGGVAVLVETMTDNLNRTVSEVRHAFTKNDGNLGTTGSVAYLFNKRGEISFNDTSLEDEVMLVALDAGAL
DIENDGESLLVITEWENFGHVKDALNAAGLVSDNAEVTMSPSTSAEIDNVADAEKVMKMIDMLEDIDDVQEVYSNVNFSD
EVMAQLEQ

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=26.3157894736842, Blast_Score=102, Evalue=4e-22,
Organism=Escherichia coli, GI1788171, Length=248, Percent_Identity=62.9032258064516, Blast_Score=309, Evalue=1e-85,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=36.5957446808511, Blast_Score=144, Evalue=6e-36,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=30.7984790874525, Blast_Score=115, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24583305, Length=255, Percent_Identity=28.6274509803922, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1479_PSYCK (Q1QAP5)

Other databases:

- EMBL:   CP000323
- RefSeq:   YP_580742.1
- ProteinModelPortal:   Q1QAP5
- SMR:   Q1QAP5
- STRING:   Q1QAP5
- GeneID:   4034447
- GenomeReviews:   CP000323_GR
- KEGG:   pcr:Pcryo_1479
- NMPDR:   fig|335284.3.peg.1373
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- PhylomeDB:   Q1QAP5
- ProtClustDB:   PRK00110
- BioCyc:   PCRY335284:PCRYO_1479-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27170; Mature: 27039

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKHRKARQDAVKGKVFTKIIREIVSAAKQGDPDPDKNPRLRAVIEKALSVN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
MTRDTINRAVARGTGGDDNDNMDEVSYEGYGIGGVAVLVETMTDNLNRTVSEVRHAFTKN
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DGNLGTTGSVAYLFNKRGEISFNDTSLEDEVMLVALDAGALDIENDGESLLVITEWENFG
CCCCCCCCCEEEEECCCCCEEECCCCCCCCEEEEEECCCCEEECCCCCEEEEEECCCCCC
HVKDALNAAGLVSDNAEVTMSPSTSAEIDNVADAEKVMKMIDMLEDIDDVQEVYSNVNFS
HHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DEVMAQLEQ
HHHHHHHCC
>Mature Secondary Structure 
AGHSKWANIKHRKARQDAVKGKVFTKIIREIVSAAKQGDPDPDKNPRLRAVIEKALSVN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
MTRDTINRAVARGTGGDDNDNMDEVSYEGYGIGGVAVLVETMTDNLNRTVSEVRHAFTKN
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DGNLGTTGSVAYLFNKRGEISFNDTSLEDEVMLVALDAGALDIENDGESLLVITEWENFG
CCCCCCCCCEEEEECCCCCEEECCCCCCCCEEEEEECCCCEEECCCCCEEEEEECCCCCC
HVKDALNAAGLVSDNAEVTMSPSTSAEIDNVADAEKVMKMIDMLEDIDDVQEVYSNVNFS
HHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DEVMAQLEQ
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA