| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006264
Identifier: 93006264
GI number: 93006264
Start: 1769610
End: 1770389
Strand: Direct
Name: 93006264
Synonym: Pcryo_1438
Alternate gene names: NA
Gene position: 1769610-1770389 (Clockwise)
Preceding gene: 93006251
Following gene: 93006267
Centisome position: 57.83
GC content: 41.15
Gene sequence:
>780_bases ATGCATTTTTATGGCTTTCAAATTAACTTCTTCAAACACAATTACGTCATTCAGGAGATTATGATGAAAAACATATTAAC TAGTAAAGCTGCTCTCAGCACTGGTACAGCGCTTTTATTAACAGCGATGATGGGAAGCGCTCATGCAGCACCAACTGGCT ACGACCAACTTACTTTTCAGGCAGAAGTAAAAGAAGAGATTCAAAACGATGAGGTCACTGCCAGCTTATATAAAAAAGCA CAGGCAACTGATGCAAAAGCATTAGCAACCACATTAAACACTTCGATTAATAATGCTTTGAAAATCGCTAAACGCTACCC AACTGTCACCGTCAGTACAGGGCAACAGCGTACCTACCCACGCTATGATAAAAATAATAAAATCATTGGATGGACAGGAC AGGCAAATATAGATCTAAAAAGTACGGATTTTACCGCAACTAGCCAGCTGATTGCTGATTTACAAGAAACCTTAGTGATG GAAAATCTCAGCTTTGGTGTTTCAGATATCAAAAAGAATGCGCTAGAGCAAAAGCTAATGACCGAAGCTTCTCGCGCCTT TCAGCAGCAAGCTAAAAATATGACCCGTGCTTGGGATGCACGCGGCTATCGTGTCGTCAATGTCAATCTAAACACTGGTA GCAATTATCCGCGCCCGATGTATAATGCAATGAGTATGAAAGCTGAGAGTGCTGATGCGTCTGTACCAAGCCAAAACTTT GAATCTGGTAACAGCACCATCTCAGTCACTGCCAATGGTACGATTGAGTTGACTAAATAA
Upstream 100 bases:
>100_bases CGCCTGTAACTTAAGTGACAAAATTCTCACAGCGATACTTTTAAATTTTGCTATTTTAGCTAAGAAGCTTAAATGCTATA AAAAATGCCAAATAAATAAA
Downstream 100 bases:
>100_bases AATACAGTCAAAGTTATATGAAAAGATGAGTATGAATAAAGGCAATCGCTGATATCAGTGATTGCCTTTATTTTTTAGAT AACATTATTCATCATAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MHFYGFQINFFKHNYVIQEIMMKNILTSKAALSTGTALLLTAMMGSAHAAPTGYDQLTFQAEVKEEIQNDEVTASLYKKA QATDAKALATTLNTSINNALKIAKRYPTVTVSTGQQRTYPRYDKNNKIIGWTGQANIDLKSTDFTATSQLIADLQETLVM ENLSFGVSDIKKNALEQKLMTEASRAFQQQAKNMTRAWDARGYRVVNVNLNTGSNYPRPMYNAMSMKAESADASVPSQNF ESGNSTISVTANGTIELTK
Sequences:
>Translated_259_residues MHFYGFQINFFKHNYVIQEIMMKNILTSKAALSTGTALLLTAMMGSAHAAPTGYDQLTFQAEVKEEIQNDEVTASLYKKA QATDAKALATTLNTSINNALKIAKRYPTVTVSTGQQRTYPRYDKNNKIIGWTGQANIDLKSTDFTATSQLIADLQETLVM ENLSFGVSDIKKNALEQKLMTEASRAFQQQAKNMTRAWDARGYRVVNVNLNTGSNYPRPMYNAMSMKAESADASVPSQNF ESGNSTISVTANGTIELTK >Mature_259_residues MHFYGFQINFFKHNYVIQEIMMKNILTSKAALSTGTALLLTAMMGSAHAAPTGYDQLTFQAEVKEEIQNDEVTASLYKKA QATDAKALATTLNTSINNALKIAKRYPTVTVSTGQQRTYPRYDKNNKIIGWTGQANIDLKSTDFTATSQLIADLQETLVM ENLSFGVSDIKKNALEQKLMTEASRAFQQQAKNMTRAWDARGYRVVNVNLNTGSNYPRPMYNAMSMKAESADASVPSQNF ESGNSTISVTANGTIELTK
Specific function: Unknown
COG id: COG3471
COG function: function code S; Predicted periplasmic/secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28613; Mature: 28613
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFYGFQINFFKHNYVIQEIMMKNILTSKAALSTGTALLLTAMMGSAHAAPTGYDQLTFQ CEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHEEEH AEVKEEIQNDEVTASLYKKAQATDAKALATTLNTSINNALKIAKRYPTVTVSTGQQRTYP HHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC RYDKNNKIIGWTGQANIDLKSTDFTATSQLIADLQETLVMENLSFGVSDIKKNALEQKLM CCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TEASRAFQQQAKNMTRAWDARGYRVVNVNLNTGSNYPRPMYNAMSMKAESADASVPSQNF HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCC ESGNSTISVTANGTIELTK CCCCCEEEEEECCEEEECC >Mature Secondary Structure MHFYGFQINFFKHNYVIQEIMMKNILTSKAALSTGTALLLTAMMGSAHAAPTGYDQLTFQ CEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHEEEH AEVKEEIQNDEVTASLYKKAQATDAKALATTLNTSINNALKIAKRYPTVTVSTGQQRTYP HHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC RYDKNNKIIGWTGQANIDLKSTDFTATSQLIADLQETLVMENLSFGVSDIKKNALEQKLM CCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TEASRAFQQQAKNMTRAWDARGYRVVNVNLNTGSNYPRPMYNAMSMKAESADASVPSQNF HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCC ESGNSTISVTANGTIELTK CCCCCEEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA