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The map label for this gene is lemA [H]

Identifier: 93006263

GI number: 93006263

Start: 1768530

End: 1769126

Strand: Reverse

Name: lemA [H]

Synonym: Pcryo_1437

Alternate gene names: 93006263

Gene position: 1769126-1768530 (Counterclockwise)

Preceding gene: 93006265

Following gene: 93006262

Centisome position: 57.82

GC content: 43.72

Gene sequence:

>597_bases
ATGAAAGTGTTTGTTTGGTCATTCATTGTAGTGGTTGTATTTGTAATGATTTTTGGTGCATCAATATTTAATAAGTTGAT
ACGCGCCCGTAATCAAGCAAAAAATGGTTTTGCGCAGATAGATGTACAGCTAAAACGTCGTCATGATTTGATTCCAAACC
TAGTCGAAACTACAAGACGTTACTTGTCTCACGAGGAAGAGACGCTGATACGCGTTATTAGTGCGCGCAACCATGCTCAG
AGTCTGCAGGATTCTAGCAAGCATCAGCCAGACTCGCTTGAACACATGGCGCTATTTGCCAAGGCTGAGAGTATGTTGTC
CAAAGCATTAGGACAGTTCTCAGCGGTTGTGGAAGCGTATCCTGAGCTAAAAGCAGACAGCATGATTAAAGAGTTAATGG
ATGAGCTGACCAATACTGAGAACCGCATTGGCTTTGCCCGTCAGCACTATAATGACAGCGTGATGTTCTACAACAATGAC
CGCGAGGTATTTCCCAATAATCTGATTAGCACGACTTTTGGCTTTCGCCCGTTAAGCCCGCTAGTATTTGAAGACAGAAA
TGTGATTGCACAAGCACCTGTCGTCAATATGGGCTGA

Upstream 100 bases:

>100_bases
TTATCTTATTTTGAACTTTTAGTAAACTATATAAGTTAAAATACAATACAGTAACTTTTATTAACAATAAGATTAATACA
AAGCGTATTGGAGTCTGACG

Downstream 100 bases:

>100_bases
TGTTTCATTACGTTCGGATGCCTAAATGCGTTTAGCTATTTTTAAGTCGGCAACTAGATGGATTTTTTTGGTGAACAGCG
CACCCGTACTCAGCGAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKVFVWSFIVVVVFVMIFGASIFNKLIRARNQAKNGFAQIDVQLKRRHDLIPNLVETTRRYLSHEEETLIRVISARNHAQ
SLQDSSKHQPDSLEHMALFAKAESMLSKALGQFSAVVEAYPELKADSMIKELMDELTNTENRIGFARQHYNDSVMFYNND
REVFPNNLISTTFGFRPLSPLVFEDRNVIAQAPVVNMG

Sequences:

>Translated_198_residues
MKVFVWSFIVVVVFVMIFGASIFNKLIRARNQAKNGFAQIDVQLKRRHDLIPNLVETTRRYLSHEEETLIRVISARNHAQ
SLQDSSKHQPDSLEHMALFAKAESMLSKALGQFSAVVEAYPELKADSMIKELMDELTNTENRIGFARQHYNDSVMFYNND
REVFPNNLISTTFGFRPLSPLVFEDRNVIAQAPVVNMG
>Mature_198_residues
MKVFVWSFIVVVVFVMIFGASIFNKLIRARNQAKNGFAQIDVQLKRRHDLIPNLVETTRRYLSHEEETLIRVISARNHAQ
SLQDSSKHQPDSLEHMALFAKAESMLSKALGQFSAVVEAYPELKADSMIKELMDELTNTENRIGFARQHYNDSVMFYNND
REVFPNNLISTTFGFRPLSPLVFEDRNVIAQAPVVNMG

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 22678; Mature: 22678

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVFVWSFIVVVVFVMIFGASIFNKLIRARNQAKNGFAQIDVQLKRRHDLIPNLVETTRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHH
YLSHEEETLIRVISARNHAQSLQDSSKHQPDSLEHMALFAKAESMLSKALGQFSAVVEAY
HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PELKADSMIKELMDELTNTENRIGFARQHYNDSVMFYNNDREVFPNNLISTTFGFRPLSP
HCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCCCCCC
LVFEDRNVIAQAPVVNMG
HHCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MKVFVWSFIVVVVFVMIFGASIFNKLIRARNQAKNGFAQIDVQLKRRHDLIPNLVETTRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHH
YLSHEEETLIRVISARNHAQSLQDSSKHQPDSLEHMALFAKAESMLSKALGQFSAVVEAY
HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PELKADSMIKELMDELTNTENRIGFARQHYNDSVMFYNNDREVFPNNLISTTFGFRPLSP
HCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCCCCCC
LVFEDRNVIAQAPVVNMG
HHCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]