| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006262
Identifier: 93006262
GI number: 93006262
Start: 1765539
End: 1768472
Strand: Reverse
Name: 93006262
Synonym: Pcryo_1436
Alternate gene names: NA
Gene position: 1768472-1765539 (Counterclockwise)
Preceding gene: 93006263
Following gene: 93006261
Centisome position: 57.8
GC content: 42.33
Gene sequence:
>2934_bases ATGGATTTTTTTGGTGAACAGCGCACCCGTACTCAGCGAAGTCTGTTGCTCTATGGGCTATTTTTTCTCATTGTCTTTGC ACATCTGGCAGTAGCGCTGGGTATCATGGCGCTGCTGCTGACGATATTTACTGGTGGCATTGATCATTGGGTGTTGATAC TGGTTGTGGTCTGGATAATCGGTAGCTTTGTCATTGGCAGTTTTTTAGAGTACAGACGTTTAGAAGCGGGTGGTCGCGCT ATTGCTCAGCGTGTGGGCGGGGTTCGCCTATTTATCGACCACAGCCAAGATGCGTGGGAGCATAGTCAAGGGATTGCCCA TCAGCATGAGCCTGTACCAAAGGTTCGCTTCAGTGCACGCCAAATTGCGGTACGTGATGAGCGTGATTTCCCGCCTGTTT ATCGTCGCTATTATGAGATTGCCCAGCAGCTAGCGATTGCTTCAGGTTTTAGTATGCCAATATTATATGTGTTGCCTAAC GAGCAAGGCATCAATGGATTTATTGCAGGTCGTCATAGTCAAGATATGGCGCTTGTAGTTACTCAAGGCGCACTTGATAA ACTGTCTGATGAGGGGCTATATGGTCTGATAGGGCACGAATATGGTCATCTATTACATGGTGATGCCAAGTTTAATCTAC AACTAATGGTTGTGCTGGCAGGCTTACAATTACTCTATGACTGGAGTGATCCAATTTCCAATCATCGTTCTCTTGATACT GATATCACTTCCCATCAGTCTCTATCACAGAGACAAGTTGATCATTTTGCACGCAGTACAGAGGCGCAAACCGCCCATTT TACCACTCATAGTGAGTGGGTCACTTACTGGCAGCAGCAATCACAACAACAGCAGTCCTCAGCCAAGCGTCAGTCGAAAT GGTTGCAAAATAGACCTGTAATAGATCGACAAGCACCGCGTAATATCTGGACATTACTAATACATGGGTTGAGCTTCTCT AGTATGGCAAGTGCCCAACTAATCAAGCACAGCTTTAACCGCGAGCGTGAATTGCTAGCCGATGCGACCAGTATACAGCT CACACGCTCGCCAGCAATTATGGAAACCTTGCAAGCCATTCATCAAGATTCCTTGGGTTCGCGCTTGACAGGTATCGCCG ATATTAATGGACTTAGTCATTTTTTCTTTGCCAGTAGCGGCGCCGACCTAGGTGATGTCTCATGGTTTGCTACTCATCCA AGTTTGAGTGAGCGTATGAGCGCCATTAATGCCAATACTTATCACGACTTTGCCATACAAGTTGCCAAAGAAAAACGTAT TAATCAGAAGAAAGTACAAGAAGTTTATGAGCAGCGCCGGCTGGGTGATTGGGGAGTAATAACAGTAAATAGCCTAAAAA GAAGAAATAATAGCCTAAGTACAGAATCGCCAGAAAAAATCATACTTCAATCTCAGTCATCACCTAGTATTTATAAGAAC AATGATACAGAGATAAGTAGTGAGTTAGACACGGACTCAGGTCTTGAGTTCGCTGTAGAGAAGGATATGATAGTTGATGG GCGTTTACAAGTAAAAGCAATCTCTATTGGTACACGTCAGCTGATAAGGCCATGGCAAGCAAAGCATGATAGCGACCTGC TGGCAAAAAATTTAATCAGTACTGCTGATATAAACAAGGTGTCACTGCCACAATATGTGCTTAATCACAGTTATCATCCG CGGGGTGCGCAGGCTTTGATTGAGGCGGTGATGTTATGCCATCAAGGTTGCATATTGTCTACCACTGCCACTTATGATTT ATCAGATATCTGGAGTGGTATTCCTAAAGATAGGGTAGTGACTACGACTGATAGTAGCTCTACGTCTAATGTAAAACCTC GAATTGATACAATGAGTGATCAGAAAATATTGTTGCATGCCATAGATCAGCAGTTACTAGAGGTGGTTGCTGGTATTGAT CGGCGGTTAGATAGTGCTTTGATAATATTGGCTATAAAGCAACTATCCCAGCATAATTTATCCGAAAGCGTGATAAATGA ATTACGCTTAAAAAGTGAAAGTAGTCATAGCCACCAAAGCCATCTATATTATAAACAGCAAACAAAATCTCGTACCATGC TGATGCGCTATCAGCATGGCATCACTCAGCTGTTTAAAAGCCAGTTAATCGTCGATTTGAGCAGAAATTTTGCTGATAAT ATAGCCAACGATGATAGTTATATTGATAAGCCTAAACCAGTATTCACGCGCTCAGAGAATACAATCTCTCGGTCACCGTC AATTTTGTCATTATGGCAGGCGCTGCACTTACAGCAACTACTGCCTATATTGTCTGGTGTTTTAAACCATAATTTATCAA GCGCCAATGAATCATGGCAACTGGAGTTACGAGCTGGTTTAGATGATATTTATGCCCAGCTTGATCCATCAGGTCAGGTT TTTAACAGCCTTGGCAACGCTGAAAAAACAATATTAACGCTACTAGCCTACCGATTATCAAAAGATGTCAAAGGTCAGGT AGCATCAGCTCTGAGGGATAGAAGTTTTAGTGTGTCCAATTATGTTGTATATGTACGCCGTCATGCACGCCTGATTGATA TTGATTTAACAGCAGTGAGCGATGCAAATTTACAATGGCTACTATTGACTGCACAAAATTTAAATAGTGTGCAATTATTG GCATTGATAGAAGCAGTGCCTGTTTTTATATCATCAAGCATAGACAGTGAAGAGGCTGGTGATAATTATCAAGACAGGCA GCAGAGTGATGGTCAAATAGAGTATAATAGCGCTATAAAAAACAGCCATATTGATGATGTCATTACTGATAATCTATATA TAGTTAGCAATTATCGTCAATGGCTAAGTACATTGCATACAGTGATGTTACACGATACGATAGTCAGCCAAGATGAATAT GATTGCTTAACGATACTGGCAGAGCACTGGCTTGGTGTTAGACAGCTTTTTTAG
Upstream 100 bases:
>100_bases CAGAAATGTGATTGCACAAGCACCTGTCGTCAATATGGGCTGATGTTTCATTACGTTCGGATGCCTAAATGCGTTTAGCT ATTTTTAAGTCGGCAACTAG
Downstream 100 bases:
>100_bases GTAGATTGGACGATTTTATAGTTAGTGCGTCAAGTAATGGTTAACATCGTTTTTGACAGTAAAAGCCTGTAAACCCATTT TATATAAGTAGGATAGTAGA
Product: peptidase M48, Ste24p
Products: NA
Alternate protein names: Zn-Dependent Protease With Chaperone Function; Heat Shock Protein HtpX; Protease; Zinc Dependent Peptidase
Number of amino acids: Translated: 977; Mature: 977
Protein sequence:
>977_residues MDFFGEQRTRTQRSLLLYGLFFLIVFAHLAVALGIMALLLTIFTGGIDHWVLILVVVWIIGSFVIGSFLEYRRLEAGGRA IAQRVGGVRLFIDHSQDAWEHSQGIAHQHEPVPKVRFSARQIAVRDERDFPPVYRRYYEIAQQLAIASGFSMPILYVLPN EQGINGFIAGRHSQDMALVVTQGALDKLSDEGLYGLIGHEYGHLLHGDAKFNLQLMVVLAGLQLLYDWSDPISNHRSLDT DITSHQSLSQRQVDHFARSTEAQTAHFTTHSEWVTYWQQQSQQQQSSAKRQSKWLQNRPVIDRQAPRNIWTLLIHGLSFS SMASAQLIKHSFNRERELLADATSIQLTRSPAIMETLQAIHQDSLGSRLTGIADINGLSHFFFASSGADLGDVSWFATHP SLSERMSAINANTYHDFAIQVAKEKRINQKKVQEVYEQRRLGDWGVITVNSLKRRNNSLSTESPEKIILQSQSSPSIYKN NDTEISSELDTDSGLEFAVEKDMIVDGRLQVKAISIGTRQLIRPWQAKHDSDLLAKNLISTADINKVSLPQYVLNHSYHP RGAQALIEAVMLCHQGCILSTTATYDLSDIWSGIPKDRVVTTTDSSSTSNVKPRIDTMSDQKILLHAIDQQLLEVVAGID RRLDSALIILAIKQLSQHNLSESVINELRLKSESSHSHQSHLYYKQQTKSRTMLMRYQHGITQLFKSQLIVDLSRNFADN IANDDSYIDKPKPVFTRSENTISRSPSILSLWQALHLQQLLPILSGVLNHNLSSANESWQLELRAGLDDIYAQLDPSGQV FNSLGNAEKTILTLLAYRLSKDVKGQVASALRDRSFSVSNYVVYVRRHARLIDIDLTAVSDANLQWLLLTAQNLNSVQLL ALIEAVPVFISSSIDSEEAGDNYQDRQQSDGQIEYNSAIKNSHIDDVITDNLYIVSNYRQWLSTLHTVMLHDTIVSQDEY DCLTILAEHWLGVRQLF
Sequences:
>Translated_977_residues MDFFGEQRTRTQRSLLLYGLFFLIVFAHLAVALGIMALLLTIFTGGIDHWVLILVVVWIIGSFVIGSFLEYRRLEAGGRA IAQRVGGVRLFIDHSQDAWEHSQGIAHQHEPVPKVRFSARQIAVRDERDFPPVYRRYYEIAQQLAIASGFSMPILYVLPN EQGINGFIAGRHSQDMALVVTQGALDKLSDEGLYGLIGHEYGHLLHGDAKFNLQLMVVLAGLQLLYDWSDPISNHRSLDT DITSHQSLSQRQVDHFARSTEAQTAHFTTHSEWVTYWQQQSQQQQSSAKRQSKWLQNRPVIDRQAPRNIWTLLIHGLSFS SMASAQLIKHSFNRERELLADATSIQLTRSPAIMETLQAIHQDSLGSRLTGIADINGLSHFFFASSGADLGDVSWFATHP SLSERMSAINANTYHDFAIQVAKEKRINQKKVQEVYEQRRLGDWGVITVNSLKRRNNSLSTESPEKIILQSQSSPSIYKN NDTEISSELDTDSGLEFAVEKDMIVDGRLQVKAISIGTRQLIRPWQAKHDSDLLAKNLISTADINKVSLPQYVLNHSYHP RGAQALIEAVMLCHQGCILSTTATYDLSDIWSGIPKDRVVTTTDSSSTSNVKPRIDTMSDQKILLHAIDQQLLEVVAGID RRLDSALIILAIKQLSQHNLSESVINELRLKSESSHSHQSHLYYKQQTKSRTMLMRYQHGITQLFKSQLIVDLSRNFADN IANDDSYIDKPKPVFTRSENTISRSPSILSLWQALHLQQLLPILSGVLNHNLSSANESWQLELRAGLDDIYAQLDPSGQV FNSLGNAEKTILTLLAYRLSKDVKGQVASALRDRSFSVSNYVVYVRRHARLIDIDLTAVSDANLQWLLLTAQNLNSVQLL ALIEAVPVFISSSIDSEEAGDNYQDRQQSDGQIEYNSAIKNSHIDDVITDNLYIVSNYRQWLSTLHTVMLHDTIVSQDEY DCLTILAEHWLGVRQLF >Mature_977_residues MDFFGEQRTRTQRSLLLYGLFFLIVFAHLAVALGIMALLLTIFTGGIDHWVLILVVVWIIGSFVIGSFLEYRRLEAGGRA IAQRVGGVRLFIDHSQDAWEHSQGIAHQHEPVPKVRFSARQIAVRDERDFPPVYRRYYEIAQQLAIASGFSMPILYVLPN EQGINGFIAGRHSQDMALVVTQGALDKLSDEGLYGLIGHEYGHLLHGDAKFNLQLMVVLAGLQLLYDWSDPISNHRSLDT DITSHQSLSQRQVDHFARSTEAQTAHFTTHSEWVTYWQQQSQQQQSSAKRQSKWLQNRPVIDRQAPRNIWTLLIHGLSFS SMASAQLIKHSFNRERELLADATSIQLTRSPAIMETLQAIHQDSLGSRLTGIADINGLSHFFFASSGADLGDVSWFATHP SLSERMSAINANTYHDFAIQVAKEKRINQKKVQEVYEQRRLGDWGVITVNSLKRRNNSLSTESPEKIILQSQSSPSIYKN NDTEISSELDTDSGLEFAVEKDMIVDGRLQVKAISIGTRQLIRPWQAKHDSDLLAKNLISTADINKVSLPQYVLNHSYHP RGAQALIEAVMLCHQGCILSTTATYDLSDIWSGIPKDRVVTTTDSSSTSNVKPRIDTMSDQKILLHAIDQQLLEVVAGID RRLDSALIILAIKQLSQHNLSESVINELRLKSESSHSHQSHLYYKQQTKSRTMLMRYQHGITQLFKSQLIVDLSRNFADN IANDDSYIDKPKPVFTRSENTISRSPSILSLWQALHLQQLLPILSGVLNHNLSSANESWQLELRAGLDDIYAQLDPSGQV FNSLGNAEKTILTLLAYRLSKDVKGQVASALRDRSFSVSNYVVYVRRHARLIDIDLTAVSDANLQWLLLTAQNLNSVQLL ALIEAVPVFISSSIDSEEAGDNYQDRQQSDGQIEYNSAIKNSHIDDVITDNLYIVSNYRQWLSTLHTVMLHDTIVSQDEY DCLTILAEHWLGVRQLF
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 110188; Mature: 110188
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFFGEQRTRTQRSLLLYGLFFLIVFAHLAVALGIMALLLTIFTGGIDHWVLILVVVWII CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GSFVIGSFLEYRRLEAGGRAIAQRVGGVRLFIDHSQDAWEHSQGIAHQHEPVPKVRFSAR HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHCCCCCCCCCCCCHHHHHH QIAVRDERDFPPVYRRYYEIAQQLAIASGFSMPILYVLPNEQGINGFIAGRHSQDMALVV HEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEECCCCCCEEEEE TQGALDKLSDEGLYGLIGHEYGHLLHGDAKFNLQLMVVLAGLQLLYDWSDPISNHRSLDT ECCHHHHHCCCCCEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC DITSHQSLSQRQVDHFARSTEAQTAHFTTHSEWVTYWQQQSQQQQSSAKRQSKWLQNRPV CHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IDRQAPRNIWTLLIHGLSFSSMASAQLIKHSFNRERELLADATSIQLTRSPAIMETLQAI CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHCCHHEEEECCHHHHHHHHHH HQDSLGSRLTGIADINGLSHFFFASSGADLGDVSWFATHPSLSERMSAINANTYHDFAIQ HHHHHCCHHCCHHHCCCHHHHHEECCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHH VAKEKRINQKKVQEVYEQRRLGDWGVITVNSLKRRNNSLSTESPEKIILQSQSSPSIYKN HHHHHCCCHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCCCCCCCEEEEECCCCCCCCCC NDTEISSELDTDSGLEFAVEKDMIVDGRLQVKAISIGTRQLIRPWQAKHDSDLLAKNLIS CCCCHHHCCCCCCCCEEEEECCEEECCCEEEEEEECCHHHHHCCHHCCCCHHHHHHHHHH TADINKVSLPQYVLNHSYHPRGAQALIEAVMLCHQGCILSTTATYDLSDIWSGIPKDRVV HCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCEE TTTDSSSTSNVKPRIDTMSDQKILLHAIDQQLLEVVAGIDRRLDSALIILAIKQLSQHNL EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH SESVINELRLKSESSHSHQSHLYYKQQTKSRTMLMRYQHGITQLFKSQLIVDLSRNFADN HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IANDDSYIDKPKPVFTRSENTISRSPSILSLWQALHLQQLLPILSGVLNHNLSSANESWQ CCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE LELRAGLDDIYAQLDPSGQVFNSLGNAEKTILTLLAYRLSKDVKGQVASALRDRSFSVSN EEECCCHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH YVVYVRRHARLIDIDLTAVSDANLQWLLLTAQNLNSVQLLALIEAVPVFISSSIDSEEAG HEEEEECCCEEEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHCC DNYQDRQQSDGQIEYNSAIKNSHIDDVITDNLYIVSNYRQWLSTLHTVMLHDTIVSQDEY CCCHHHCCCCCCEEECHHHCCCCCCHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCH DCLTILAEHWLGVRQLF HHHHHHHHHHHHHHHCC >Mature Secondary Structure MDFFGEQRTRTQRSLLLYGLFFLIVFAHLAVALGIMALLLTIFTGGIDHWVLILVVVWII CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GSFVIGSFLEYRRLEAGGRAIAQRVGGVRLFIDHSQDAWEHSQGIAHQHEPVPKVRFSAR HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHCCCCCCCCCCCCHHHHHH QIAVRDERDFPPVYRRYYEIAQQLAIASGFSMPILYVLPNEQGINGFIAGRHSQDMALVV HEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEECCCCCCEEEEE TQGALDKLSDEGLYGLIGHEYGHLLHGDAKFNLQLMVVLAGLQLLYDWSDPISNHRSLDT ECCHHHHHCCCCCEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC DITSHQSLSQRQVDHFARSTEAQTAHFTTHSEWVTYWQQQSQQQQSSAKRQSKWLQNRPV CHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IDRQAPRNIWTLLIHGLSFSSMASAQLIKHSFNRERELLADATSIQLTRSPAIMETLQAI CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHCCHHEEEECCHHHHHHHHHH HQDSLGSRLTGIADINGLSHFFFASSGADLGDVSWFATHPSLSERMSAINANTYHDFAIQ HHHHHCCHHCCHHHCCCHHHHHEECCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHH VAKEKRINQKKVQEVYEQRRLGDWGVITVNSLKRRNNSLSTESPEKIILQSQSSPSIYKN HHHHHCCCHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCCCCCCCEEEEECCCCCCCCCC NDTEISSELDTDSGLEFAVEKDMIVDGRLQVKAISIGTRQLIRPWQAKHDSDLLAKNLIS CCCCHHHCCCCCCCCEEEEECCEEECCCEEEEEEECCHHHHHCCHHCCCCHHHHHHHHHH TADINKVSLPQYVLNHSYHPRGAQALIEAVMLCHQGCILSTTATYDLSDIWSGIPKDRVV HCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCEE TTTDSSSTSNVKPRIDTMSDQKILLHAIDQQLLEVVAGIDRRLDSALIILAIKQLSQHNL EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH SESVINELRLKSESSHSHQSHLYYKQQTKSRTMLMRYQHGITQLFKSQLIVDLSRNFADN HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IANDDSYIDKPKPVFTRSENTISRSPSILSLWQALHLQQLLPILSGVLNHNLSSANESWQ CCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE LELRAGLDDIYAQLDPSGQVFNSLGNAEKTILTLLAYRLSKDVKGQVASALRDRSFSVSN EEECCCHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH YVVYVRRHARLIDIDLTAVSDANLQWLLLTAQNLNSVQLLALIEAVPVFISSSIDSEEAG HEEEEECCCEEEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHCC DNYQDRQQSDGQIEYNSAIKNSHIDDVITDNLYIVSNYRQWLSTLHTVMLHDTIVSQDEY CCCHHHCCCCCCEEECHHHCCCCCCHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCH DCLTILAEHWLGVRQLF HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA