| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is bfrA [H]
Identifier: 93006210
GI number: 93006210
Start: 1694475
End: 1694963
Strand: Reverse
Name: bfrA [H]
Synonym: Pcryo_1384
Alternate gene names: 93006210
Gene position: 1694963-1694475 (Counterclockwise)
Preceding gene: 93006211
Following gene: 93006209
Centisome position: 55.39
GC content: 41.72
Gene sequence:
>489_bases ATGATTGGCAACCCTAAAGTGATTGATTATTTAAACTTTTTGTTAGGTGGCGAGCTTGCAGCTCGTGATCAGTATTTCAT CCACTCTGAGATGTATGCAGAATGGCATTACGGTAAATTGTATGATCGTATCAGCCATGAGATGGAAGATGAGACCTTAC ATGCACAGGCAATTATTCGTCGTATTTTGATGTTAGGCGGCACGCCTAAAATGAGCGTCGACGCGATTAATATTGGTACT ACTGTACCTGAGATGCTACAGCTTGATTTAAATTTAGAATATCAGGTACAAAAACATCTTAAAGACGGTATCGCAATGTG TGAAGAAGCGCATGACTATGTCACACGCGAGATGTTGGTCGTGCAGCTCAAAGACACGGAAGAGGATCATGCCCATTGGC TTGAGCAGCAGCTACGCTTGATTGATATGATTGGTCTGCCAAATTATTTGCAAAGTCAGATGGCTGAAGTCTCTTCAAAT CTTGTTTGA
Upstream 100 bases:
>100_bases TGATTTTAATCTTTACTGATTGGTTGACTAATGGCACTTTATATATATGCAAAATTATGAATGTATATAACAAACAATGA TACATACAGGAGTGTAAGTG
Downstream 100 bases:
>100_bases TAGTAACGGATAATAATCGCTATATAGTTAAATCAAATATCCAATAGATAGGGAGAGAGAATATGAATGGGGATAAAGAC ATTATCCGCGCACTGAATAA
Product: bacterioferritin
Products: NA
Alternate protein names: BFR A [H]
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MIGNPKVIDYLNFLLGGELAARDQYFIHSEMYAEWHYGKLYDRISHEMEDETLHAQAIIRRILMLGGTPKMSVDAINIGT TVPEMLQLDLNLEYQVQKHLKDGIAMCEEAHDYVTREMLVVQLKDTEEDHAHWLEQQLRLIDMIGLPNYLQSQMAEVSSN LV
Sequences:
>Translated_162_residues MIGNPKVIDYLNFLLGGELAARDQYFIHSEMYAEWHYGKLYDRISHEMEDETLHAQAIIRRILMLGGTPKMSVDAINIGT TVPEMLQLDLNLEYQVQKHLKDGIAMCEEAHDYVTREMLVVQLKDTEEDHAHWLEQQLRLIDMIGLPNYLQSQMAEVSSN LV >Mature_162_residues MIGNPKVIDYLNFLLGGELAARDQYFIHSEMYAEWHYGKLYDRISHEMEDETLHAQAIIRRILMLGGTPKMSVDAINIGT TVPEMLQLDLNLEYQVQKHLKDGIAMCEEAHDYVTREMLVVQLKDTEEDHAHWLEQQLRLIDMIGLPNYLQSQMAEVSSN LV
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1789733, Length=157, Percent_Identity=47.1337579617834, Blast_Score=132, Evalue=1e-32,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 18746; Mature: 18746
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS50905 FERRITIN_LIKE ; PS00549 BACTERIOFERRITIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGNPKVIDYLNFLLGGELAARDQYFIHSEMYAEWHYGKLYDRISHEMEDETLHAQAIIR CCCCCHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RILMLGGTPKMSVDAINIGTTVPEMLQLDLNLEYQVQKHLKDGIAMCEEAHDYVTREMLV HHHHHCCCCCCEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE VQLKDTEEDHAHWLEQQLRLIDMIGLPNYLQSQMAEVSSNLV EEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MIGNPKVIDYLNFLLGGELAARDQYFIHSEMYAEWHYGKLYDRISHEMEDETLHAQAIIR CCCCCHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RILMLGGTPKMSVDAINIGTTVPEMLQLDLNLEYQVQKHLKDGIAMCEEAHDYVTREMLV HHHHHCCCCCCEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE VQLKDTEEDHAHWLEQQLRLIDMIGLPNYLQSQMAEVSSNLV EEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA