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The map label for this gene is zntR [H]

Identifier: 93006174

GI number: 93006174

Start: 1646645

End: 1647055

Strand: Reverse

Name: zntR [H]

Synonym: Pcryo_1346

Alternate gene names: 93006174

Gene position: 1647055-1646645 (Counterclockwise)

Preceding gene: 93006182

Following gene: 93006171

Centisome position: 53.83

GC content: 42.82

Gene sequence:

>411_bases
ATGACAATCAAAATTGGTGAGCTCGCTAAACGCACAGGTGCCACAGTGGAAACCATTCGCTATTACGAAAAGGAGCACTT
ATTACCTGAGCCTTCTCGCAGCGCAGGGAATTATCGTTTATATAATGAAGAGCACATTGAGCGTCTACAATTTATCCTAC
ACTGCCGTACGCTTGACATGGCTCTAGACGAAGTACGAATCTTACTTGAGTTTTGGGAGGAACCTGATAAAGACTGTGGT
GATGTGAGCTCCTTACTAGATAAGCAAATTTATGCTGTAGAAATACGAATGGAAGAACTGATGCACTTAAAGCAGCACTT
GACTGTTTTGCGCCAGAAATGTGCAAGTAGTGCACCAGCGGTATCATGTGGGATATTAAAGGCTCTTGCCGATAATTCTT
GTCATGAGTAA

Upstream 100 bases:

>100_bases
GGCTTTAGAGTCAAGGTTGTCTATCTACAGTTTTGTAAATTTAATTTCTCTAGCGCCAGTCTTTACAGCCACTTTAATTA
TTTAAATCATAGAGGTTATT

Downstream 100 bases:

>100_bases
TGATATTAGTAGTGTTCATTTCTGACTGATCAAATCATGAAAGGTTAAATACACCCTGATGTTAAGCACAAAAAAACCCA
GCAATGATATTAAGATCACT

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MTIKIGELAKRTGATVETIRYYEKEHLLPEPSRSAGNYRLYNEEHIERLQFILHCRTLDMALDEVRILLEFWEEPDKDCG
DVSSLLDKQIYAVEIRMEELMHLKQHLTVLRQKCASSAPAVSCGILKALADNSCHE

Sequences:

>Translated_136_residues
MTIKIGELAKRTGATVETIRYYEKEHLLPEPSRSAGNYRLYNEEHIERLQFILHCRTLDMALDEVRILLEFWEEPDKDCG
DVSSLLDKQIYAVEIRMEELMHLKQHLTVLRQKCASSAPAVSCGILKALADNSCHE
>Mature_135_residues
TIKIGELAKRTGATVETIRYYEKEHLLPEPSRSAGNYRLYNEEHIERLQFILHCRTLDMALDEVRILLEFWEEPDKDCGD
VSSLLDKQIYAVEIRMEELMHLKQHLTVLRQKCASSAPAVSCGILKALADNSCHE

Specific function: Transcriptional regulator [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=132, Percent_Identity=36.3636363636364, Blast_Score=89, Evalue=1e-19,
Organism=Escherichia coli, GI1786695, Length=133, Percent_Identity=29.3233082706767, Blast_Score=70, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 15673; Mature: 15542

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKIGELAKRTGATVETIRYYEKEHLLPEPSRSAGNYRLYNEEHIERLQFILHCRTLDM
CCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHH
ALDEVRILLEFWEEPDKDCGDVSSLLDKQIYAVEIRMEELMHLKQHLTVLRQKCASSAPA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VSCGILKALADNSCHE
HHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TIKIGELAKRTGATVETIRYYEKEHLLPEPSRSAGNYRLYNEEHIERLQFILHCRTLDM
CCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHH
ALDEVRILLEFWEEPDKDCGDVSSLLDKQIYAVEIRMEELMHLKQHLTVLRQKCASSAPA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VSCGILKALADNSCHE
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]