| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93006159
Identifier: 93006159
GI number: 93006159
Start: 1629080
End: 1630408
Strand: Direct
Name: 93006159
Synonym: Pcryo_1331
Alternate gene names: NA
Gene position: 1629080-1630408 (Clockwise)
Preceding gene: 93006157
Following gene: 93006162
Centisome position: 53.24
GC content: 39.13
Gene sequence:
>1329_bases TTGATCTATAAAATTATCTCAAACCAGCATCTGCGTATGGCATTGCTATTTTTACTGATTCAGCAAATTATTGTTGCTTC ATCAACGTACTTTATTGCTCGCCTTGCACAAAGTTTGACCGAGGAGAGTATCTCAATTTTATATATGGTGCTATTTGCCG TCTCTTTAGTAGCGGTTTATGTGCCCGCGTATTTTTGTGTCACCAATACAGAGCGCGCCAAGTACGATGCTCATAAGCTG TACAATGATAATTTCCATACCGTCTTCTTAGGCAAGACCTGTCTGTTATCCAGCGACGAGTTACAGAGTACGGCAACAAC AACCCTTGCCCAAGAAAGTAATTACACCCTTGAGACAGTCATTGATAGTATTTTTGATATTTCAGCGTTGGTACTCAATG TCTTATTTAATGTGTTGGTCATTGCTTGGTTTTTAGATGGCACATTACTGCTTGGTTATGCAGTAGGTATTATTTTCGCC TCCCTGTTTGTGCATTTTAGACGACACGCCCTAAAATCGGCTGCCAAAACAGATCAGCAATCACGGCTGAATTTAACCGC TAAACTTTTTGACAGTTGGGATAACGTCGTTATTTTTAATAAGCATAATTACACGCTCTATAATAATATTGTTCAAAAAA TCTTTGCGACAGCCAAGAATAATAGCGTTAAATCTACTTCGATACAGCATATCAATTCAAGCTTAGGCATGATCATATTG ATGCTGCCTGTCTTTGTGGTTACTGCTTTTATTTTTAATAAAAATTGGCAAGATGCTGCGACGATGGCGGTACTCATTAC CACGCTGCCAAGACAAATTCAGCTATTGCAAATGTGCTATGCCTTGATTGGCTACCATACCAGTATTGGCGTTATTAAAA CGATGCTAGATGGTATTTTAGAGGTCTTACAACCTACCGCTGTCAATTTAGATCACTATATTCAAGCAGACCAAATACGT GTGCAGCAAACAGGGGATATTTTTGATTCAACACAACTGCCCAAGCAAGGTAGAGTAACGTTGGTTGGTAATAATGGCGT TGGCAAATCTTGTATGTTGCTCAAGCTCAAAGAGGACTACCAAGAGCAGGCTTACTATTTACCTGCCAAGCACAATTTGT ATTTCAATTACAAATCAGATAAAGCCCATAAGGGTTCAACAGGACAACAACTCATCAAACAAATTCAAGAGATTAGAGAG GACGACCAGAGTACGATTGTCATGCTTGATGAATGGGATGCACACTTGGATAGAGAAAATACTCAAATCATAGATCAATA TCTTGATGAGCTTGCCCAAACAAGACTTGTAATGGATGTTAGGCATTGA
Upstream 100 bases:
>100_bases AAAAGATAGTAAGAATATTATATGTCAGCAGAGTTGACACCAATAAGAAGTCGTTACTTGCTCAATTACTGTGTTTAGAC CTTAAAGGATGTAAATAAAT
Downstream 100 bases:
>100_bases TTTAGAAAGCTCTTAATCTTCTCATAGCTTGCTGAACATATGTTTTTAGTGAAAATTGTTAAGACATAAATCGTTTCATT AAAACCTAATTAGTATATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MIYKIISNQHLRMALLFLLIQQIIVASSTYFIARLAQSLTEESISILYMVLFAVSLVAVYVPAYFCVTNTERAKYDAHKL YNDNFHTVFLGKTCLLSSDELQSTATTTLAQESNYTLETVIDSIFDISALVLNVLFNVLVIAWFLDGTLLLGYAVGIIFA SLFVHFRRHALKSAAKTDQQSRLNLTAKLFDSWDNVVIFNKHNYTLYNNIVQKIFATAKNNSVKSTSIQHINSSLGMIIL MLPVFVVTAFIFNKNWQDAATMAVLITTLPRQIQLLQMCYALIGYHTSIGVIKTMLDGILEVLQPTAVNLDHYIQADQIR VQQTGDIFDSTQLPKQGRVTLVGNNGVGKSCMLLKLKEDYQEQAYYLPAKHNLYFNYKSDKAHKGSTGQQLIKQIQEIRE DDQSTIVMLDEWDAHLDRENTQIIDQYLDELAQTRLVMDVRH
Sequences:
>Translated_442_residues MIYKIISNQHLRMALLFLLIQQIIVASSTYFIARLAQSLTEESISILYMVLFAVSLVAVYVPAYFCVTNTERAKYDAHKL YNDNFHTVFLGKTCLLSSDELQSTATTTLAQESNYTLETVIDSIFDISALVLNVLFNVLVIAWFLDGTLLLGYAVGIIFA SLFVHFRRHALKSAAKTDQQSRLNLTAKLFDSWDNVVIFNKHNYTLYNNIVQKIFATAKNNSVKSTSIQHINSSLGMIIL MLPVFVVTAFIFNKNWQDAATMAVLITTLPRQIQLLQMCYALIGYHTSIGVIKTMLDGILEVLQPTAVNLDHYIQADQIR VQQTGDIFDSTQLPKQGRVTLVGNNGVGKSCMLLKLKEDYQEQAYYLPAKHNLYFNYKSDKAHKGSTGQQLIKQIQEIRE DDQSTIVMLDEWDAHLDRENTQIIDQYLDELAQTRLVMDVRH >Mature_442_residues MIYKIISNQHLRMALLFLLIQQIIVASSTYFIARLAQSLTEESISILYMVLFAVSLVAVYVPAYFCVTNTERAKYDAHKL YNDNFHTVFLGKTCLLSSDELQSTATTTLAQESNYTLETVIDSIFDISALVLNVLFNVLVIAWFLDGTLLLGYAVGIIFA SLFVHFRRHALKSAAKTDQQSRLNLTAKLFDSWDNVVIFNKHNYTLYNNIVQKIFATAKNNSVKSTSIQHINSSLGMIIL MLPVFVVTAFIFNKNWQDAATMAVLITTLPRQIQLLQMCYALIGYHTSIGVIKTMLDGILEVLQPTAVNLDHYIQADQIR VQQTGDIFDSTQLPKQGRVTLVGNNGVGKSCMLLKLKEDYQEQAYYLPAKHNLYFNYKSDKAHKGSTGQQLIKQIQEIRE DDQSTIVMLDEWDAHLDRENTQIIDQYLDELAQTRLVMDVRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50221; Mature: 50221
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYKIISNQHLRMALLFLLIQQIIVASSTYFIARLAQSLTEESISILYMVLFAVSLVAVY CEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPAYFCVTNTERAKYDAHKLYNDNFHTVFLGKTCLLSSDELQSTATTTLAQESNYTLETV HHHHHEECCCHHHHHHHHHHCCCCCEEEEECCEEECCCHHHHHHHHHHHHCCCCCHHHHH IDSIFDISALVLNVLFNVLVIAWFLDGTLLLGYAVGIIFASLFVHFRRHALKSAAKTDQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SRLNLTAKLFDSWDNVVIFNKHNYTLYNNIVQKIFATAKNNSVKSTSIQHINSSLGMIIL HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH MLPVFVVTAFIFNKNWQDAATMAVLITTLPRQIQLLQMCYALIGYHTSIGVIKTMLDGIL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVLQPTAVNLDHYIQADQIRVQQTGDIFDSTQLPKQGRVTLVGNNGVGKSCMLLKLKEDY HHHCCCCCCHHHHCCHHHEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEHHHH QEQAYYLPAKHNLYFNYKSDKAHKGSTGQQLIKQIQEIREDDQSTIVMLDEWDAHLDREN HHCCEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCH TQIIDQYLDELAQTRLVMDVRH HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIYKIISNQHLRMALLFLLIQQIIVASSTYFIARLAQSLTEESISILYMVLFAVSLVAVY CEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPAYFCVTNTERAKYDAHKLYNDNFHTVFLGKTCLLSSDELQSTATTTLAQESNYTLETV HHHHHEECCCHHHHHHHHHHCCCCCEEEEECCEEECCCHHHHHHHHHHHHCCCCCHHHHH IDSIFDISALVLNVLFNVLVIAWFLDGTLLLGYAVGIIFASLFVHFRRHALKSAAKTDQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SRLNLTAKLFDSWDNVVIFNKHNYTLYNNIVQKIFATAKNNSVKSTSIQHINSSLGMIIL HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH MLPVFVVTAFIFNKNWQDAATMAVLITTLPRQIQLLQMCYALIGYHTSIGVIKTMLDGIL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVLQPTAVNLDHYIQADQIRVQQTGDIFDSTQLPKQGRVTLVGNNGVGKSCMLLKLKEDY HHHCCCCCCHHHHCCHHHEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEHHHH QEQAYYLPAKHNLYFNYKSDKAHKGSTGQQLIKQIQEIREDDQSTIVMLDEWDAHLDREN HHCCEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCH TQIIDQYLDELAQTRLVMDVRH HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA