| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006142
Identifier: 93006142
GI number: 93006142
Start: 1605463
End: 1606500
Strand: Direct
Name: 93006142
Synonym: Pcryo_1314
Alternate gene names: NA
Gene position: 1605463-1606500 (Clockwise)
Preceding gene: 93006129
Following gene: 93006148
Centisome position: 52.47
GC content: 42.77
Gene sequence:
>1038_bases ATGAGCGACAAAAAAGACAAGCAAAGCGCCGATTTAGAGGCAAACTTAGCAAAAATCGCTAATACGAAGCCACGACTGCG TAATCGTAAACATAATATCTATGAGCGTTATATCACTCGTGTTGAAAGCGCAGAGACTATTGAAAGTACTATCGAAAATA CAGAAAATGAGCTCAAGCCAACTGTCACCACTGATGCTTATGATGAGACTGATGTTGGTCTTAGTGCAAGTCTACTGGAC AGTTCTGTTCAGCCGCACATATTACAACCGCTTAAAAACGCTGACAAGCTGTCATCCTATGAGCCACTAAGTGCAGCAGA ACTAGAGTTATTTGGCAGCCAAGAGCAAGATAATGTGGAAAATACAGCAGGGTTACAGATATCTGATAACGCGAGCACAT CGGTAAGCTTGGACTTCTCTGATGAAGATGAGAAGGTTATACACCCTTTAATGACAACTGAGGCGACTGATAACGCAGCT TCTACAGTTAAAGATGAAGATACTGAGGTAAATGATAGCGCTTATATTGATGAACCTATCAGCACTGCACCTTTAACAAC TTTGCCCATCAAAAAATCGAAAAAAAAGAAAGCGGTAAAATCAATACAAAAGCAGAAGAGTAGTAAAAAGCCGCTCATTA TCGGTATGGTGCTTGGCTCACTCATGATTTCTGGTGCTGTATTCACGTTAATTGCGACTGGTTTCTTGTCTGCCGGCACT ACGTCTACAGCGTTAAATGAAGCTGGCACGCCTATTAATGAAAGCGCGACTCAGACAAGCCCGGTCACCAAACAAACAGC TACTGACACTGAAATGAACACCACTGAGAAAAATGTTGTGGTAGAGGCTAATACGCCACCTGCTGTCATTGAAGTGCCCA GTGACTCTGACCCTGCCAAATCATCAAACCCCAAGCCTGAAACGAACGCGATGAATAATGAGGCAGCTGCTAGTACGTCA ACATCAAAGCCTGCCATCACATACGAAGATTTTAGAGAAGAGTCACAAAACACGCTATATCGTGAAACCAATGATTAG
Upstream 100 bases:
>100_bases TATTAACGATAGCGTTACACTTTAGCAAACTAAAAAACTTTTCCCTTCATTCTAGCAGTCATCTACGGTTTCGTGGCATA AACTGGTTTGGTATCACTTC
Downstream 100 bases:
>100_bases CGTCATAAAAACTCTTGTCTCAAATAACTTTCTTGCTTTTCTTTAGGCTCTTTTTTAACCAATGGTCAAATATGAACGGA CCAAAGGGTAAGAACGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MSDKKDKQSADLEANLAKIANTKPRLRNRKHNIYERYITRVESAETIESTIENTENELKPTVTTDAYDETDVGLSASLLD SSVQPHILQPLKNADKLSSYEPLSAAELELFGSQEQDNVENTAGLQISDNASTSVSLDFSDEDEKVIHPLMTTEATDNAA STVKDEDTEVNDSAYIDEPISTAPLTTLPIKKSKKKKAVKSIQKQKSSKKPLIIGMVLGSLMISGAVFTLIATGFLSAGT TSTALNEAGTPINESATQTSPVTKQTATDTEMNTTEKNVVVEANTPPAVIEVPSDSDPAKSSNPKPETNAMNNEAAASTS TSKPAITYEDFREESQNTLYRETND
Sequences:
>Translated_345_residues MSDKKDKQSADLEANLAKIANTKPRLRNRKHNIYERYITRVESAETIESTIENTENELKPTVTTDAYDETDVGLSASLLD SSVQPHILQPLKNADKLSSYEPLSAAELELFGSQEQDNVENTAGLQISDNASTSVSLDFSDEDEKVIHPLMTTEATDNAA STVKDEDTEVNDSAYIDEPISTAPLTTLPIKKSKKKKAVKSIQKQKSSKKPLIIGMVLGSLMISGAVFTLIATGFLSAGT TSTALNEAGTPINESATQTSPVTKQTATDTEMNTTEKNVVVEANTPPAVIEVPSDSDPAKSSNPKPETNAMNNEAAASTS TSKPAITYEDFREESQNTLYRETND >Mature_344_residues SDKKDKQSADLEANLAKIANTKPRLRNRKHNIYERYITRVESAETIESTIENTENELKPTVTTDAYDETDVGLSASLLDS SVQPHILQPLKNADKLSSYEPLSAAELELFGSQEQDNVENTAGLQISDNASTSVSLDFSDEDEKVIHPLMTTEATDNAAS TVKDEDTEVNDSAYIDEPISTAPLTTLPIKKSKKKKAVKSIQKQKSSKKPLIIGMVLGSLMISGAVFTLIATGFLSAGTT STALNEAGTPINESATQTSPVTKQTATDTEMNTTEKNVVVEANTPPAVIEVPSDSDPAKSSNPKPETNAMNNEAAASTST SKPAITYEDFREESQNTLYRETND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37282; Mature: 37151
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKKDKQSADLEANLAKIANTKPRLRNRKHNIYERYITRVESAETIESTIENTENELKP CCCCCCCHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TVTTDAYDETDVGLSASLLDSSVQPHILQPLKNADKLSSYEPLSAAELELFGSQEQDNVE CEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCC NTAGLQISDNASTSVSLDFSDEDEKVIHPLMTTEATDNAASTVKDEDTEVNDSAYIDEPI CCCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCC STAPLTTLPIKKSKKKKAVKSIQKQKSSKKPLIIGMVLGSLMISGAVFTLIATGFLSAGT CCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC TSTALNEAGTPINESATQTSPVTKQTATDTEMNTTEKNVVVEANTPPAVIEVPSDSDPAK CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCC SSNPKPETNAMNNEAAASTSTSKPAITYEDFREESQNTLYRETND CCCCCCCCCCCCCCHHCCCCCCCCCEEHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SDKKDKQSADLEANLAKIANTKPRLRNRKHNIYERYITRVESAETIESTIENTENELKP CCCCCCHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TVTTDAYDETDVGLSASLLDSSVQPHILQPLKNADKLSSYEPLSAAELELFGSQEQDNVE CEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCC NTAGLQISDNASTSVSLDFSDEDEKVIHPLMTTEATDNAASTVKDEDTEVNDSAYIDEPI CCCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCC STAPLTTLPIKKSKKKKAVKSIQKQKSSKKPLIIGMVLGSLMISGAVFTLIATGFLSAGT CCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC TSTALNEAGTPINESATQTSPVTKQTATDTEMNTTEKNVVVEANTPPAVIEVPSDSDPAK CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCC SSNPKPETNAMNNEAAASTSTSKPAITYEDFREESQNTLYRETND CCCCCCCCCCCCCCHHCCCCCCCCCEEHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA